Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC108475.1-201ENST00000507880 950 ntBASIC3.49□□□□□ -1.85
SSX3Q99909 AC109458.1-201ENST00000508858 316 ntBASIC3.49□□□□□ -1.85
SSX3Q99909 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SSX3Q99909 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SSX3Q99909 RN7SKP13-201ENST00000515933 244 ntBASIC3.49□□□□□ -1.85
SSX3Q99909 MRPL49P2-201ENST00000521066 465 ntBASIC3.49□□□□□ -1.85
SSX3Q99909 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.49□□□□□ -1.85
SSX3Q99909 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.49□□□□□ -1.85
SSX3Q99909 CYCSP29-201ENST00000533731 318 ntBASIC3.49□□□□□ -1.85
SSX3Q99909 AC005832.3-201ENST00000537929 631 ntBASIC3.49□□□□□ -1.85
SSX3Q99909 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.49□□□□□ -1.85
SSX3Q99909 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.49□□□□□ -1.85
SSX3Q99909 AC023813.2-201ENST00000564321 469 ntBASIC3.49□□□□□ -1.85
SSX3Q99909 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.49□□□□□ -1.85
SSX3Q99909 AC079171.1-201ENST00000568788 914 ntBASIC3.49□□□□□ -1.85
SSX3Q99909 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.49□□□□□ -1.85
SSX3Q99909 AC006254.3-201ENST00000603353 884 ntBASIC3.49□□□□□ -1.85
SSX3Q99909 MTND3P19-201ENST00000603825 345 ntBASIC3.49□□□□□ -1.85
SSX3Q99909 AP003392.5-201ENST00000607857 415 ntBASIC3.49□□□□□ -1.85
SSX3Q99909 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.49□□□□□ -1.85
SSX3Q99909 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
SSX3Q99909 AC092650.2-201ENST00000619984 902 ntBASIC3.49□□□□□ -1.85
SSX3Q99909 FP325313.1-201ENST00000638228 703 ntBASIC3.49□□□□□ -1.85
SSX3Q99909 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SSX3Q99909 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
SSX3Q99909 AL365440.1-201ENST00000436135 2167 ntBASIC3.49□□□□□ -1.85
SSX3Q99909 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
SSX3Q99909 AC138915.3-201ENST00000562908 1389 ntBASIC3.49□□□□□ -1.85
SSX3Q99909 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SSX3Q99909 CDR1-202ENST00000625883 1485 ntBASIC3.48□□□□□ -1.85
SSX3Q99909 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SSX3Q99909 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SSX3Q99909 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SSX3Q99909 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SSX3Q99909 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
SSX3Q99909 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.48□□□□□ -1.85
SSX3Q99909 RNA5SP295-201ENST00000362655 121 ntBASIC3.48□□□□□ -1.85
SSX3Q99909 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.48□□□□□ -1.85
SSX3Q99909 SNORA70C-201ENST00000384538 135 ntBASIC3.48□□□□□ -1.85
SSX3Q99909 AC016769.3-201ENST00000396562 315 ntBASIC3.48□□□□□ -1.85
SSX3Q99909 AC097374.1-203ENST00000400783 485 ntBASIC3.48□□□□□ -1.85
SSX3Q99909 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SSX3Q99909 MTHFD2P2-201ENST00000407725 247 ntBASIC3.48□□□□□ -1.85
SSX3Q99909 RNU6-712P-201ENST00000410558 100 ntBASIC3.48□□□□□ -1.85
SSX3Q99909 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SSX3Q99909 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.48□□□□□ -1.85
SSX3Q99909 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SSX3Q99909 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.48□□□□□ -1.85
SSX3Q99909 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.48□□□□□ -1.85
SSX3Q99909 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SSX3Q99909 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SSX3Q99909 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.48□□□□□ -1.85
SSX3Q99909 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.48□□□□□ -1.85
SSX3Q99909 AL356535.1-201ENST00000440335 398 ntBASIC3.48□□□□□ -1.85
SSX3Q99909 RABEPKP1-201ENST00000440529 1026 ntBASIC3.48□□□□□ -1.85
SSX3Q99909 RPL23AP76-201ENST00000441860 458 ntBASIC3.48□□□□□ -1.85
SSX3Q99909 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SSX3Q99909 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.48□□□□□ -1.85
SSX3Q99909 RPS27AP1-201ENST00000475545 471 ntBASIC3.48□□□□□ -1.85
SSX3Q99909 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SSX3Q99909 AC041039.1-201ENST00000485656 536 ntBASIC3.48□□□□□ -1.85
SSX3Q99909 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.48□□□□□ -1.85
SSX3Q99909 AC114322.1-201ENST00000506771 926 ntBASIC3.48□□□□□ -1.85
SSX3Q99909 AC008837.2-201ENST00000513076 418 ntBASIC3.48□□□□□ -1.85
SSX3Q99909 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.48□□□□□ -1.85
SSX3Q99909 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.48□□□□□ -1.85
SSX3Q99909 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.48□□□□□ -1.85
SSX3Q99909 AP000619.3-201ENST00000535634 1127 ntBASIC3.48□□□□□ -1.85
SSX3Q99909 TRAV8-5-201ENST00000537369 341 ntBASIC3.48□□□□□ -1.85
SSX3Q99909 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
SSX3Q99909 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.48□□□□□ -1.85
SSX3Q99909 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.48□□□□□ -1.85
SSX3Q99909 AC010198.2-201ENST00000550612 259 ntBASIC3.48□□□□□ -1.85
SSX3Q99909 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.48□□□□□ -1.85
SSX3Q99909 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.48□□□□□ -1.85
SSX3Q99909 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.48□□□□□ -1.85
SSX3Q99909 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.48□□□□□ -1.85
SSX3Q99909 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.48□□□□□ -1.85
SSX3Q99909 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SSX3Q99909 AL132657.2-201ENST00000564417 358 ntBASIC3.48□□□□□ -1.85
SSX3Q99909 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SSX3Q99909 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.48□□□□□ -1.85
SSX3Q99909 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.48□□□□□ -1.85
SSX3Q99909 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.48□□□□□ -1.85
SSX3Q99909 AP001269.3-201ENST00000588718 329 ntBASIC3.48□□□□□ -1.85
SSX3Q99909 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.48□□□□□ -1.85
SSX3Q99909 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.48□□□□□ -1.85
SSX3Q99909 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.48□□□□□ -1.85
SSX3Q99909 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.48□□□□□ -1.85
SSX3Q99909 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SSX3Q99909 AF117829.1-206ENST00000621883 3802 ntBASIC3.48□□□□□ -1.85
SSX3Q99909 MFSD8-236ENST00000641509 4050 ntBASIC3.48□□□□□ -1.85
SSX3Q99909 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
SSX3Q99909 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
SSX3Q99909 GDI2P1-201ENST00000429312 1336 ntBASIC3.47□□□□□ -1.85
SSX3Q99909 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SSX3Q99909 AC244517.1-201ENST00000606030 2086 ntBASIC3.47□□□□□ -1.85
SSX3Q99909 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.47□□□□□ -1.85
SSX3Q99909 RNU6-216P-201ENST00000363282 104 ntBASIC3.47□□□□□ -1.85
SSX3Q99909 RNU6-560P-201ENST00000364007 108 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms