Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.65□□□□□ -1.67
SMOQ99835 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.65□□□□□ -1.67
SMOQ99835 BNIP3P8-201ENST00000597863 560 ntBASIC4.65□□□□□ -1.67
SMOQ99835 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.65□□□□□ -1.67
SMOQ99835 AC091834.1-201ENST00000614543 472 ntBASIC4.65□□□□□ -1.67
SMOQ99835 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.65□□□□□ -1.67
SMOQ99835 OR5AK4P-201ENST00000635912 903 ntBASIC4.65□□□□□ -1.67
SMOQ99835 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.65□□□□□ -1.67
SMOQ99835 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.65□□□□□ -1.67
SMOQ99835 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.65□□□□□ -1.67
SMOQ99835 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SMOQ99835 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.65□□□□□ -1.67
SMOQ99835 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.65□□□□□ -1.67
SMOQ99835 DDX18P3-201ENST00000404856 2007 ntBASIC4.65□□□□□ -1.67
SMOQ99835 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SMOQ99835 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SMOQ99835 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SMOQ99835 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.65□□□□□ -1.67
SMOQ99835 AL022578.1-201ENST00000439330 1433 ntBASIC4.64□□□□□ -1.67
SMOQ99835 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.64□□□□□ -1.67
SMOQ99835 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SMOQ99835 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SMOQ99835 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.64□□□□□ -1.67
SMOQ99835 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SMOQ99835 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.64□□□□□ -1.67
SMOQ99835 OR11H4-201ENST00000315409 1082 ntBASIC4.64□□□□□ -1.67
SMOQ99835 RN7SKP226-201ENST00000364912 300 ntBASIC4.64□□□□□ -1.67
SMOQ99835 SNORA51.6-201ENST00000384151 125 ntBASIC4.64□□□□□ -1.67
SMOQ99835 AC016769.3-201ENST00000396562 315 ntBASIC4.64□□□□□ -1.67
SMOQ99835 ZNF603P-201ENST00000405613 487 ntBASIC4.64□□□□□ -1.67
SMOQ99835 RN7SKP266-201ENST00000410232 287 ntBASIC4.64□□□□□ -1.67
SMOQ99835 Y_RNA.604-201ENST00000410574 102 ntBASIC4.64□□□□□ -1.67
SMOQ99835 RN7SKP167-201ENST00000411047 285 ntBASIC4.64□□□□□ -1.67
SMOQ99835 RNU6-603P-201ENST00000411403 107 ntBASIC4.64□□□□□ -1.67
SMOQ99835 AL133384.1-201ENST00000412744 351 ntBASIC4.64□□□□□ -1.67
SMOQ99835 Z97055.1-201ENST00000419730 712 ntBASIC4.64□□□□□ -1.67
SMOQ99835 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.64□□□□□ -1.67
SMOQ99835 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.64□□□□□ -1.67
SMOQ99835 RPEP2-201ENST00000432149 701 ntBASIC4.64□□□□□ -1.67
SMOQ99835 AC109583.1-201ENST00000432156 268 ntBASIC4.64□□□□□ -1.67
SMOQ99835 AC011998.1-201ENST00000433403 117 ntBASIC4.64□□□□□ -1.67
SMOQ99835 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SMOQ99835 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.64□□□□□ -1.67
SMOQ99835 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.64□□□□□ -1.67
SMOQ99835 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.64□□□□□ -1.67
SMOQ99835 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC4.64□□□□□ -1.67
SMOQ99835 OR6K1P-201ENST00000456766 971 ntBASIC4.64□□□□□ -1.67
SMOQ99835 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.64□□□□□ -1.67
SMOQ99835 FTH1P2-201ENST00000466086 412 ntBASIC4.64□□□□□ -1.67
SMOQ99835 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
SMOQ99835 AC106872.3-201ENST00000495104 446 ntBASIC4.64□□□□□ -1.67
SMOQ99835 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.64□□□□□ -1.67
SMOQ99835 MTND4LP18-201ENST00000526864 291 ntBASIC4.64□□□□□ -1.67
SMOQ99835 ZNF705CP-201ENST00000530515 889 ntBASIC4.64□□□□□ -1.67
SMOQ99835 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.64□□□□□ -1.67
SMOQ99835 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.64□□□□□ -1.67
SMOQ99835 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.64□□□□□ -1.67
SMOQ99835 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.64□□□□□ -1.67
SMOQ99835 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.64□□□□□ -1.67
SMOQ99835 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.64□□□□□ -1.67
SMOQ99835 MIR3936-201ENST00000584304 110 ntBASIC4.64□□□□□ -1.67
SMOQ99835 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.64□□□□□ -1.67
SMOQ99835 RPL7P50-201ENST00000600588 727 ntBASIC4.64□□□□□ -1.67
SMOQ99835 AC113403.1-201ENST00000604910 193 ntBASIC4.64□□□□□ -1.67
SMOQ99835 BCRP9-201ENST00000605312 388 ntBASIC4.64□□□□□ -1.67
SMOQ99835 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.64□□□□□ -1.67
SMOQ99835 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.64□□□□□ -1.67
SMOQ99835 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.64□□□□□ -1.67
SMOQ99835 AC116447.1-201ENST00000613153 453 ntBASIC4.64□□□□□ -1.67
SMOQ99835 uc_338.13-201ENST00000618243 179 ntBASIC4.64□□□□□ -1.67
SMOQ99835 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.64□□□□□ -1.67
SMOQ99835 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SMOQ99835 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.64□□□□□ -1.67
SMOQ99835 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SMOQ99835 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.64□□□□□ -1.67
SMOQ99835 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SMOQ99835 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SMOQ99835 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
SMOQ99835 EIF2AP4-201ENST00000424793 1781 ntBASIC4.63□□□□□ -1.67
SMOQ99835 MAPK10-286ENST00000641208 8747 ntBASIC4.63□□□□□ -1.67
SMOQ99835 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SMOQ99835 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
SMOQ99835 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SMOQ99835 RNA5SP307-201ENST00000362863 116 ntBASIC4.63□□□□□ -1.67
SMOQ99835 SNORA62-201ENST00000365493 153 ntBASIC4.63□□□□□ -1.67
SMOQ99835 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC4.63□□□□□ -1.67
SMOQ99835 AC068538.1-201ENST00000376856 336 ntBASIC4.63□□□□□ -1.67
SMOQ99835 RNU6-533P-201ENST00000384144 107 ntBASIC4.63□□□□□ -1.67
SMOQ99835 RNU6-769P-201ENST00000384407 104 ntBASIC4.63□□□□□ -1.67
SMOQ99835 AL583835.1-201ENST00000399570 407 ntBASIC4.63□□□□□ -1.67
SMOQ99835 AL359643.1-201ENST00000404109 423 ntBASIC4.63□□□□□ -1.67
SMOQ99835 AL023807.1-201ENST00000407932 359 ntBASIC4.63□□□□□ -1.67
SMOQ99835 SNORA11F-201ENST00000408237 128 ntBASIC4.63□□□□□ -1.67
SMOQ99835 TPMTP2-201ENST00000414372 726 ntBASIC4.63□□□□□ -1.67
SMOQ99835 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.63□□□□□ -1.67
SMOQ99835 AL513174.1-201ENST00000423182 629 ntBASIC4.63□□□□□ -1.67
SMOQ99835 AC234779.1-201ENST00000425910 285 ntBASIC4.63□□□□□ -1.67
SMOQ99835 RPL23AP25-201ENST00000430973 463 ntBASIC4.63□□□□□ -1.67
SMOQ99835 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.63□□□□□ -1.67
SMOQ99835 RPL23AP52-201ENST00000439311 478 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms