Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL139089.1-201ENST00000620372 975 ntBASIC4.33□□□□□ -1.72
SNX18Q96RF0 AC138649.3-201ENST00000622154 254 ntBASIC4.33□□□□□ -1.72
SNX18Q96RF0 MIR4727-201ENST00000622232 55 ntBASIC4.33□□□□□ -1.72
SNX18Q96RF0 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.33□□□□□ -1.72
SNX18Q96RF0 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.33□□□□□ -1.72
SNX18Q96RF0 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.33□□□□□ -1.72
SNX18Q96RF0 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.33□□□□□ -1.72
SNX18Q96RF0 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SNX18Q96RF0 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
SNX18Q96RF0 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.33□□□□□ -1.72
SNX18Q96RF0 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
SNX18Q96RF0 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.33□□□□□ -1.72
SNX18Q96RF0 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SNX18Q96RF0 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SNX18Q96RF0 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.33□□□□□ -1.72
SNX18Q96RF0 AC107027.3-201ENST00000565095 3473 ntBASIC4.33□□□□□ -1.72
SNX18Q96RF0 PHKBP1-201ENST00000450951 1951 ntBASIC4.33□□□□□ -1.72
SNX18Q96RF0 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.33□□□□□ -1.72
SNX18Q96RF0 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.32□□□□□ -1.72
SNX18Q96RF0 AL031119.1-201ENST00000404707 1879 ntBASIC4.32□□□□□ -1.72
SNX18Q96RF0 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
SNX18Q96RF0 AL445487.1-201ENST00000415694 1580 ntBASIC4.32□□□□□ -1.72
SNX18Q96RF0 AC093535.2-201ENST00000624769 2326 ntBASIC4.32□□□□□ -1.72
SNX18Q96RF0 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SNX18Q96RF0 DHFRP6-201ENST00000401776 268 ntBASIC4.32□□□□□ -1.72
SNX18Q96RF0 AC069218.2-201ENST00000411665 344 ntBASIC4.32□□□□□ -1.72
SNX18Q96RF0 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.32□□□□□ -1.72
SNX18Q96RF0 COX6B1P1-201ENST00000415962 213 ntBASIC4.32□□□□□ -1.72
SNX18Q96RF0 AF186996.5-201ENST00000418098 904 ntBASIC4.32□□□□□ -1.72
SNX18Q96RF0 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.32□□□□□ -1.72
SNX18Q96RF0 AL360081.1-201ENST00000428299 555 ntBASIC4.32□□□□□ -1.72
SNX18Q96RF0 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.32□□□□□ -1.72
SNX18Q96RF0 AL049745.1-201ENST00000433953 286 ntBASIC4.32□□□□□ -1.72
SNX18Q96RF0 PRPF38AP2-201ENST00000438179 851 ntBASIC4.32□□□□□ -1.72
SNX18Q96RF0 AC004938.1-201ENST00000438468 308 ntBASIC4.32□□□□□ -1.72
SNX18Q96RF0 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.32□□□□□ -1.72
SNX18Q96RF0 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.32□□□□□ -1.72
SNX18Q96RF0 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.32□□□□□ -1.72
SNX18Q96RF0 AL451050.1-201ENST00000450126 415 ntBASIC4.32□□□□□ -1.72
SNX18Q96RF0 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.32□□□□□ -1.72
SNX18Q96RF0 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.32□□□□□ -1.72
SNX18Q96RF0 OR6K1P-201ENST00000456766 971 ntBASIC4.32□□□□□ -1.72
SNX18Q96RF0 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.32□□□□□ -1.72
SNX18Q96RF0 AC090142.1-201ENST00000465776 462 ntBASIC4.32□□□□□ -1.72
SNX18Q96RF0 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.32□□□□□ -1.72
SNX18Q96RF0 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SNX18Q96RF0 RPL23AP65-201ENST00000475608 468 ntBASIC4.32□□□□□ -1.72
SNX18Q96RF0 RN7SL319P-201ENST00000480656 221 ntBASIC4.32□□□□□ -1.72
SNX18Q96RF0 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
SNX18Q96RF0 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
SNX18Q96RF0 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.32□□□□□ -1.72
SNX18Q96RF0 PGBD4P4-201ENST00000509673 613 ntBASIC4.32□□□□□ -1.72
SNX18Q96RF0 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.32□□□□□ -1.72
SNX18Q96RF0 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.32□□□□□ -1.72
SNX18Q96RF0 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.32□□□□□ -1.72
SNX18Q96RF0 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.32□□□□□ -1.72
SNX18Q96RF0 EDDM3DP-201ENST00000554692 434 ntBASIC4.32□□□□□ -1.72
SNX18Q96RF0 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.32□□□□□ -1.72
SNX18Q96RF0 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.32□□□□□ -1.72
SNX18Q96RF0 ZNF519P2-201ENST00000557032 169 ntBASIC4.32□□□□□ -1.72
SNX18Q96RF0 HMGB3P26-201ENST00000560051 582 ntBASIC4.32□□□□□ -1.72
SNX18Q96RF0 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.32□□□□□ -1.72
SNX18Q96RF0 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.32□□□□□ -1.72
SNX18Q96RF0 AP001180.3-201ENST00000582221 145 ntBASIC4.32□□□□□ -1.72
SNX18Q96RF0 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.32□□□□□ -1.72
SNX18Q96RF0 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.32□□□□□ -1.72
SNX18Q96RF0 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.32□□□□□ -1.72
SNX18Q96RF0 MEMO1P5-201ENST00000604810 406 ntBASIC4.32□□□□□ -1.72
SNX18Q96RF0 AL121932.1-201ENST00000605542 214 ntBASIC4.32□□□□□ -1.72
SNX18Q96RF0 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.32□□□□□ -1.72
SNX18Q96RF0 AP001596.2-201ENST00000608410 312 ntBASIC4.32□□□□□ -1.72
SNX18Q96RF0 AL159169.3-201ENST00000608871 561 ntBASIC4.32□□□□□ -1.72
SNX18Q96RF0 AC104010.1-201ENST00000616889 150 ntBASIC4.32□□□□□ -1.72
SNX18Q96RF0 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
SNX18Q96RF0 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SNX18Q96RF0 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
SNX18Q96RF0 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SNX18Q96RF0 AC006378.2-201ENST00000623178 2476 ntBASIC4.32□□□□□ -1.72
SNX18Q96RF0 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SNX18Q96RF0 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.32□□□□□ -1.72
SNX18Q96RF0 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.32□□□□□ -1.72
SNX18Q96RF0 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
SNX18Q96RF0 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
SNX18Q96RF0 AL022578.1-201ENST00000439330 1433 ntBASIC4.31□□□□□ -1.72
SNX18Q96RF0 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SNX18Q96RF0 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SNX18Q96RF0 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SNX18Q96RF0 RNU6-867P-201ENST00000364956 107 ntBASIC4.31□□□□□ -1.72
SNX18Q96RF0 RNU6-952P-201ENST00000391164 108 ntBASIC4.31□□□□□ -1.72
SNX18Q96RF0 RPL17P50-201ENST00000396131 546 ntBASIC4.31□□□□□ -1.72
SNX18Q96RF0 RPS3AP36-201ENST00000398190 775 ntBASIC4.31□□□□□ -1.72
SNX18Q96RF0 RNA5SP39-201ENST00000411245 120 ntBASIC4.31□□□□□ -1.72
SNX18Q96RF0 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SNX18Q96RF0 TPMTP2-201ENST00000414372 726 ntBASIC4.31□□□□□ -1.72
SNX18Q96RF0 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.31□□□□□ -1.72
SNX18Q96RF0 RAC1P3-201ENST00000416129 580 ntBASIC4.31□□□□□ -1.72
SNX18Q96RF0 AL590609.2-201ENST00000421430 368 ntBASIC4.31□□□□□ -1.72
SNX18Q96RF0 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.31□□□□□ -1.72
SNX18Q96RF0 AL513174.1-201ENST00000423182 629 ntBASIC4.31□□□□□ -1.72
SNX18Q96RF0 AC007742.1-201ENST00000425789 329 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms