Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
TRIM47Q96LD4 AC073850.1-201ENST00000449243 255 ntBASIC6.65□□□□□ -1.34
TRIM47Q96LD4 SDC4P-201ENST00000453285 601 ntBASIC6.65□□□□□ -1.34
TRIM47Q96LD4 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC6.65□□□□□ -1.34
TRIM47Q96LD4 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC6.65□□□□□ -1.34
TRIM47Q96LD4 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC6.65□□□□□ -1.34
TRIM47Q96LD4 RPL32P33-201ENST00000487023 394 ntBASIC6.65□□□□□ -1.34
TRIM47Q96LD4 RPS21P4-201ENST00000487122 248 ntBASIC6.65□□□□□ -1.34
TRIM47Q96LD4 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.65□□□□□ -1.34
TRIM47Q96LD4 TOMM22P4-201ENST00000511318 336 ntBASIC6.65□□□□□ -1.34
TRIM47Q96LD4 RN7SKP288-201ENST00000516227 268 ntBASIC6.65□□□□□ -1.34
TRIM47Q96LD4 RN7SKP66-201ENST00000516681 231 ntBASIC6.65□□□□□ -1.34
TRIM47Q96LD4 AP001922.4-201ENST00000526967 290 ntBASIC6.65□□□□□ -1.34
TRIM47Q96LD4 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.65□□□□□ -1.34
TRIM47Q96LD4 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.65□□□□□ -1.34
TRIM47Q96LD4 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC6.65□□□□□ -1.34
TRIM47Q96LD4 AC130289.1-201ENST00000577321 73 ntBASIC6.65□□□□□ -1.34
TRIM47Q96LD4 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC6.65□□□□□ -1.34
TRIM47Q96LD4 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC6.65□□□□□ -1.34
TRIM47Q96LD4 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC6.65□□□□□ -1.34
TRIM47Q96LD4 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
TRIM47Q96LD4 AP002512.4-202ENST00000641599 4530 ntBASIC6.65□□□□□ -1.34
TRIM47Q96LD4 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
TRIM47Q96LD4 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.65□□□□□ -1.34
TRIM47Q96LD4 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.65□□□□□ -1.34
TRIM47Q96LD4 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
TRIM47Q96LD4 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
TRIM47Q96LD4 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
TRIM47Q96LD4 THAP12P9-201ENST00000503971 2360 ntBASIC6.65□□□□□ -1.35
TRIM47Q96LD4 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
TRIM47Q96LD4 API5-210ENST00000534600 1760 ntTSL 5 BASIC6.64□□□□□ -1.35
TRIM47Q96LD4 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.64□□□□□ -1.35
TRIM47Q96LD4 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.64□□□□□ -1.35
TRIM47Q96LD4 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM47Q96LD4 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM47Q96LD4 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM47Q96LD4 ZNF402P-201ENST00000404435 3100 ntBASIC6.64□□□□□ -1.35
TRIM47Q96LD4 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM47Q96LD4 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM47Q96LD4 AC239868.2-201ENST00000564237 4527 ntBASIC6.64□□□□□ -1.35
TRIM47Q96LD4 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.64□□□□□ -1.35
TRIM47Q96LD4 AL137141.1-201ENST00000624622 4836 ntBASIC6.64□□□□□ -1.35
TRIM47Q96LD4 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
TRIM47Q96LD4 AL159987.1-201ENST00000347911 293 ntBASIC6.64□□□□□ -1.35
TRIM47Q96LD4 U8.4-201ENST00000363626 134 ntBASIC6.64□□□□□ -1.35
TRIM47Q96LD4 Y_RNA.376-201ENST00000365638 108 ntBASIC6.64□□□□□ -1.35
TRIM47Q96LD4 Y_RNA.485-201ENST00000384395 102 ntBASIC6.64□□□□□ -1.35
TRIM47Q96LD4 AL121972.1-201ENST00000402023 252 ntBASIC6.64□□□□□ -1.35
TRIM47Q96LD4 AL357752.1-201ENST00000412817 349 ntBASIC6.64□□□□□ -1.35
TRIM47Q96LD4 UBE2FP1-201ENST00000416536 447 ntBASIC6.64□□□□□ -1.35
TRIM47Q96LD4 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM47Q96LD4 AL133173.1-201ENST00000423458 397 ntBASIC6.64□□□□□ -1.35
TRIM47Q96LD4 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC6.64□□□□□ -1.35
TRIM47Q96LD4 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.64□□□□□ -1.35
TRIM47Q96LD4 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.64□□□□□ -1.35
TRIM47Q96LD4 AC073410.1-201ENST00000435125 589 ntBASIC6.64□□□□□ -1.35
TRIM47Q96LD4 PSMD10P3-201ENST00000437000 448 ntBASIC6.64□□□□□ -1.35
TRIM47Q96LD4 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.64□□□□□ -1.35
TRIM47Q96LD4 AC011816.1-201ENST00000441346 546 ntBASIC6.64□□□□□ -1.35
TRIM47Q96LD4 TRAPPC2P3-201ENST00000443200 321 ntBASIC6.64□□□□□ -1.35
TRIM47Q96LD4 AC079781.2-201ENST00000446424 169 ntBASIC6.64□□□□□ -1.35
TRIM47Q96LD4 RPS3AP46-201ENST00000448352 682 ntBASIC6.64□□□□□ -1.35
TRIM47Q96LD4 GAPDHP14-201ENST00000450472 937 ntBASIC6.64□□□□□ -1.35
TRIM47Q96LD4 TRGVB-201ENST00000453257 471 ntBASIC6.64□□□□□ -1.35
TRIM47Q96LD4 snoU13.29-201ENST00000459370 104 ntBASIC6.64□□□□□ -1.35
TRIM47Q96LD4 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
TRIM47Q96LD4 RN7SL97P-201ENST00000486780 299 ntBASIC6.64□□□□□ -1.35
TRIM47Q96LD4 AC006499.2-201ENST00000513470 337 ntBASIC6.64□□□□□ -1.35
TRIM47Q96LD4 RNA5SP228-201ENST00000516232 133 ntBASIC6.64□□□□□ -1.35
TRIM47Q96LD4 RNU7-51P-201ENST00000516560 62 ntBASIC6.64□□□□□ -1.35
TRIM47Q96LD4 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC6.64□□□□□ -1.35
TRIM47Q96LD4 AC068993.1-201ENST00000546724 589 ntBASIC6.64□□□□□ -1.35
TRIM47Q96LD4 NPM1P42-201ENST00000560329 862 ntBASIC6.64□□□□□ -1.35
TRIM47Q96LD4 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.64□□□□□ -1.35
TRIM47Q96LD4 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.64□□□□□ -1.35
TRIM47Q96LD4 AL354984.3-201ENST00000604803 325 ntBASIC6.64□□□□□ -1.35
TRIM47Q96LD4 AC145207.9-201ENST00000623802 325 ntBASIC6.64□□□□□ -1.35
TRIM47Q96LD4 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.64□□□□□ -1.35
TRIM47Q96LD4 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM47Q96LD4 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.64□□□□□ -1.35
TRIM47Q96LD4 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.64□□□□□ -1.35
TRIM47Q96LD4 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM47Q96LD4 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM47Q96LD4 AC005224.3-201ENST00000584683 2140 ntBASIC6.64□□□□□ -1.35
TRIM47Q96LD4 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.63□□□□□ -1.35
TRIM47Q96LD4 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM47Q96LD4 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.63□□□□□ -1.35
TRIM47Q96LD4 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM47Q96LD4 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
TRIM47Q96LD4 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.63□□□□□ -1.35
TRIM47Q96LD4 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM47Q96LD4 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
TRIM47Q96LD4 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM47Q96LD4 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
TRIM47Q96LD4 RNU6-1290P-201ENST00000362957 109 ntBASIC6.63□□□□□ -1.35
TRIM47Q96LD4 Y_RNA.106-201ENST00000363189 100 ntBASIC6.63□□□□□ -1.35
TRIM47Q96LD4 RNA5SP211-201ENST00000365516 117 ntBASIC6.63□□□□□ -1.35
TRIM47Q96LD4 MIR765-201ENST00000390226 114 ntBASIC6.63□□□□□ -1.35
TRIM47Q96LD4 MYL6P5-201ENST00000412707 459 ntBASIC6.63□□□□□ -1.35
TRIM47Q96LD4 AL590806.1-201ENST00000415818 853 ntBASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms