Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC067945.1-201ENST00000342609 618 ntBASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 RNA5SP175-201ENST00000364275 119 ntBASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 HMGB1P11-201ENST00000413899 637 ntBASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 AC245028.1-201ENST00000423259 256 ntBASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 COX6CP12-201ENST00000446748 202 ntBASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 RPS29P33-201ENST00000456717 146 ntBASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 RNU7-136P-201ENST00000458819 69 ntBASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 RPL7AP28-201ENST00000464513 571 ntBASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 MTND5P4-201ENST00000514978 288 ntBASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 CDH12P4-201ENST00000517835 295 ntBASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 CDH12P3-201ENST00000517935 295 ntBASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 CDH12P1-201ENST00000518435 295 ntBASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 AP000873.5-201ENST00000533906 236 ntBASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 RFPL1S-203ENST00000539579 330 ntBASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 CR383656.6-201ENST00000550518 394 ntBASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 CENPUP2-201ENST00000555897 1186 ntBASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 AC141257.3-201ENST00000572906 215 ntBASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 MIR5186-201ENST00000577504 120 ntBASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 AC068790.2-201ENST00000602601 557 ntBASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 AL159169.3-201ENST00000608871 561 ntBASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 BX323046.1-201ENST00000610145 535 ntBASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 MIR6820-201ENST00000611508 62 ntBASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 uc_338.13-201ENST00000618243 179 ntBASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 AC092656.1-203ENST00000624134 423 ntBASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
CDK5RAP3Q96JB5 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 AC092104.1-201ENST00000497346 1441 ntBASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 AL121657.1-201ENST00000327215 531 ntBASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 MIR331-201ENST00000362302 94 ntBASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 RNU4-75P-201ENST00000364621 146 ntBASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 Y_RNA.559-201ENST00000384686 107 ntBASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 PGBD4P8-201ENST00000412993 562 ntBASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 RPL26P29-201ENST00000415623 438 ntBASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 MTCO2P34-201ENST00000421994 607 ntBASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 AC006366.1-201ENST00000422002 759 ntBASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 EIF1P3-201ENST00000423841 334 ntBASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 FTH1P6-201ENST00000430768 320 ntBASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 AL365184.2-201ENST00000431139 435 ntBASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 KCTD10P1-201ENST00000434203 625 ntBASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 BMI1P1-201ENST00000445879 941 ntBASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 AC104073.1-201ENST00000451988 151 ntBASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 AL645939.1-201ENST00000453429 797 ntBASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 AL136126.1-201ENST00000473603 402 ntBASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 AC108941.1-201ENST00000502853 530 ntBASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 AC004069.2-201ENST00000505438 1114 ntBASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 AC008694.2-201ENST00000517591 306 ntBASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 OR4A45P-201ENST00000529954 901 ntBASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 OR8L1P-201ENST00000534005 955 ntBASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 AC113403.1-201ENST00000604910 193 ntBASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 AL139286.2-201ENST00000606838 396 ntBASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 AC091979.2-201ENST00000607514 214 ntBASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 AP000254.1-201ENST00000609934 520 ntBASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 AC004825.2-201ENST00000616634 455 ntBASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms