Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
LRCH3Q96II8 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC6.76□□□□□ -1.33
LRCH3Q96II8 RNU6-960P-201ENST00000364056 120 ntBASIC6.76□□□□□ -1.33
LRCH3Q96II8 RNU6-1317P-201ENST00000364582 104 ntBASIC6.76□□□□□ -1.33
LRCH3Q96II8 RFX3-203ENST00000381984 364 ntTSL 3 BASIC6.76□□□□□ -1.33
LRCH3Q96II8 FAR2P2-201ENST00000413041 594 ntBASIC6.76□□□□□ -1.33
LRCH3Q96II8 EIF4EP2-201ENST00000422816 654 ntBASIC6.76□□□□□ -1.33
LRCH3Q96II8 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC6.76□□□□□ -1.33
LRCH3Q96II8 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.76□□□□□ -1.33
LRCH3Q96II8 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC6.76□□□□□ -1.33
LRCH3Q96II8 AP001992.1-205ENST00000462248 379 ntBASIC6.76□□□□□ -1.33
LRCH3Q96II8 AP000797.2-201ENST00000475768 606 ntBASIC6.76□□□□□ -1.33
LRCH3Q96II8 AC069499.1-201ENST00000489433 509 ntBASIC6.76□□□□□ -1.33
LRCH3Q96II8 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC6.76□□□□□ -1.33
LRCH3Q96II8 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
LRCH3Q96II8 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.76□□□□□ -1.33
LRCH3Q96II8 AC093853.1-201ENST00000515689 483 ntBASIC6.76□□□□□ -1.33
LRCH3Q96II8 RNU6-1338P-201ENST00000516328 91 ntBASIC6.76□□□□□ -1.33
LRCH3Q96II8 SNORA70.20-201ENST00000516848 126 ntBASIC6.76□□□□□ -1.33
LRCH3Q96II8 RNU6-1092P-201ENST00000516955 87 ntBASIC6.76□□□□□ -1.33
LRCH3Q96II8 Y_RNA.713-201ENST00000517013 96 ntBASIC6.76□□□□□ -1.33
LRCH3Q96II8 AF186190.1-201ENST00000517470 480 ntBASIC6.76□□□□□ -1.33
LRCH3Q96II8 AC144568.1-201ENST00000520139 137 ntBASIC6.76□□□□□ -1.33
LRCH3Q96II8 WBP1LP3-201ENST00000523033 208 ntBASIC6.76□□□□□ -1.33
LRCH3Q96II8 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.76□□□□□ -1.33
LRCH3Q96II8 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC6.76□□□□□ -1.33
LRCH3Q96II8 CYCSP27-201ENST00000527643 293 ntBASIC6.76□□□□□ -1.33
LRCH3Q96II8 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.76□□□□□ -1.33
LRCH3Q96II8 MRPS36P4-201ENST00000534436 298 ntBASIC6.76□□□□□ -1.33
LRCH3Q96II8 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC6.76□□□□□ -1.33
LRCH3Q96II8 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.76□□□□□ -1.33
LRCH3Q96II8 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.76□□□□□ -1.33
LRCH3Q96II8 AL138889.2-201ENST00000603883 242 ntBASIC6.76□□□□□ -1.33
LRCH3Q96II8 AC139493.1-201ENST00000604368 397 ntBASIC6.76□□□□□ -1.33
LRCH3Q96II8 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.76□□□□□ -1.33
LRCH3Q96II8 AP001784.1-201ENST00000624107 428 ntBASIC6.76□□□□□ -1.33
LRCH3Q96II8 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
LRCH3Q96II8 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
LRCH3Q96II8 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
LRCH3Q96II8 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
LRCH3Q96II8 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
LRCH3Q96II8 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.76□□□□□ -1.33
LRCH3Q96II8 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
LRCH3Q96II8 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
LRCH3Q96II8 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
LRCH3Q96II8 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
LRCH3Q96II8 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
LRCH3Q96II8 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
LRCH3Q96II8 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
LRCH3Q96II8 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.75□□□□□ -1.33
LRCH3Q96II8 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
LRCH3Q96II8 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
LRCH3Q96II8 AC090220.1-201ENST00000593078 1699 ntBASIC6.75□□□□□ -1.33
LRCH3Q96II8 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LRCH3Q96II8 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.75□□□□□ -1.33
LRCH3Q96II8 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.75□□□□□ -1.33
LRCH3Q96II8 RNY1P16-201ENST00000363063 111 ntBASIC6.75□□□□□ -1.33
LRCH3Q96II8 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LRCH3Q96II8 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
LRCH3Q96II8 RNU6-434P-201ENST00000384376 107 ntBASIC6.75□□□□□ -1.33
LRCH3Q96II8 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.75□□□□□ -1.33
LRCH3Q96II8 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.75□□□□□ -1.33
LRCH3Q96II8 CYCSP51-201ENST00000443545 318 ntBASIC6.75□□□□□ -1.33
LRCH3Q96II8 RPL21P104-201ENST00000464143 478 ntBASIC6.75□□□□□ -1.33
LRCH3Q96II8 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
LRCH3Q96II8 AL139099.1-201ENST00000497398 403 ntBASIC6.75□□□□□ -1.33
LRCH3Q96II8 RPL23AP55-201ENST00000498163 452 ntBASIC6.75□□□□□ -1.33
LRCH3Q96II8 HMGN2P6-201ENST00000551091 273 ntBASIC6.75□□□□□ -1.33
LRCH3Q96II8 AC009852.2-201ENST00000567898 485 ntBASIC6.75□□□□□ -1.33
LRCH3Q96II8 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
LRCH3Q96II8 RN7SL708P-201ENST00000580952 299 ntBASIC6.75□□□□□ -1.33
LRCH3Q96II8 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC6.75□□□□□ -1.33
LRCH3Q96II8 AC005332.4-201ENST00000592752 579 ntBASIC6.75□□□□□ -1.33
LRCH3Q96II8 FKBP1AP1-201ENST00000594588 318 ntBASIC6.75□□□□□ -1.33
LRCH3Q96II8 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.75□□□□□ -1.33
LRCH3Q96II8 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.75□□□□□ -1.33
LRCH3Q96II8 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LRCH3Q96II8 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.75□□□□□ -1.33
LRCH3Q96II8 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LRCH3Q96II8 AC107081.3-201ENST00000612715 2034 ntBASIC6.75□□□□□ -1.33
LRCH3Q96II8 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.75□□□□□ -1.33
LRCH3Q96II8 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
LRCH3Q96II8 PAPPA-AS1-201ENST00000445861 2450 ntBASIC6.75□□□□□ -1.33
LRCH3Q96II8 AC026951.1-201ENST00000559530 2459 ntBASIC6.75□□□□□ -1.33
LRCH3Q96II8 AP000866.6-201ENST00000638898 3579 ntBASIC6.75□□□□□ -1.33
LRCH3Q96II8 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.75□□□□□ -1.33
LRCH3Q96II8 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
LRCH3Q96II8 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
LRCH3Q96II8 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LRCH3Q96II8 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
LRCH3Q96II8 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
LRCH3Q96II8 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.75□□□□□ -1.33
LRCH3Q96II8 AC105114.1-201ENST00000624795 1862 ntBASIC6.75□□□□□ -1.33
LRCH3Q96II8 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
LRCH3Q96II8 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
LRCH3Q96II8 AL136531.3-201ENST00000624378 3658 ntBASIC6.74□□□□□ -1.33
LRCH3Q96II8 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.74□□□□□ -1.33
LRCH3Q96II8 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
LRCH3Q96II8 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
LRCH3Q96II8 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms