Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 AL357520.1-201ENST00000441557 453 ntBASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 NUTF2P3-201ENST00000448540 384 ntBASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 ZNF114P1-201ENST00000453500 292 ntBASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 FGF7P3-201ENST00000454645 303 ntBASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 DHFRP3-201ENST00000455595 559 ntBASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 RNU7-136P-201ENST00000458819 69 ntBASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 AC053481.1-201ENST00000467217 306 ntBASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 AC087312.1-201ENST00000471411 480 ntBASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 SETP11-201ENST00000473027 690 ntBASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 PRELID3BP7-201ENST00000503606 469 ntBASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 MTND5P13-201ENST00000513046 1079 ntBASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 HSPA8P13-201ENST00000523715 472 ntBASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 TRAV8-5-201ENST00000537369 341 ntBASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 LYZ-203ENST00000549690 669 ntTSL 2 BASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 NDUFAF4P1-201ENST00000559425 519 ntBASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 AC011260.1-201ENST00000578420 472 ntBASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 OR4G1P-201ENST00000588632 938 ntBASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 AL354984.3-201ENST00000604803 325 ntBASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 AC025588.4-201ENST00000615802 908 ntBASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 MIR7844-201ENST00000616161 122 ntBASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 AC009237.17-201ENST00000618111 748 ntBASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 AC019278.1-201ENST00000623516 479 ntBASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 AC091965.5-201ENST00000624785 342 ntBASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 EIF2AP4-201ENST00000424793 1781 ntBASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CHMP4CQ96CF2 AC091046.3-201ENST00000631455 1574 ntBASIC5.17□□□□□ -1.58
CHMP4CQ96CF2 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHMP4CQ96CF2 RPL23AP57-201ENST00000332361 466 ntBASIC5.17□□□□□ -1.58
CHMP4CQ96CF2 AC067945.1-201ENST00000342609 618 ntBASIC5.17□□□□□ -1.58
CHMP4CQ96CF2 SNORD82-201ENST00000365530 70 ntBASIC5.17□□□□□ -1.58
CHMP4CQ96CF2 MIR1250-201ENST00000408098 113 ntBASIC5.17□□□□□ -1.58
CHMP4CQ96CF2 TPMTP3-201ENST00000411928 735 ntBASIC5.17□□□□□ -1.58
CHMP4CQ96CF2 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.17□□□□□ -1.58
CHMP4CQ96CF2 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.17□□□□□ -1.58
CHMP4CQ96CF2 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CHMP4CQ96CF2 RPEP2-201ENST00000432149 701 ntBASIC5.17□□□□□ -1.58
CHMP4CQ96CF2 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.17□□□□□ -1.58
CHMP4CQ96CF2 RPL35AP15-201ENST00000468042 339 ntBASIC5.17□□□□□ -1.58
CHMP4CQ96CF2 PABPC1P3-201ENST00000469174 459 ntBASIC5.17□□□□□ -1.58
CHMP4CQ96CF2 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.17□□□□□ -1.58
CHMP4CQ96CF2 AC090453.1-201ENST00000495560 436 ntBASIC5.17□□□□□ -1.58
CHMP4CQ96CF2 AC082651.2-201ENST00000496833 166 ntBASIC5.17□□□□□ -1.58
CHMP4CQ96CF2 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.17□□□□□ -1.58
CHMP4CQ96CF2 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.17□□□□□ -1.58
CHMP4CQ96CF2 MTND5P4-201ENST00000514978 288 ntBASIC5.17□□□□□ -1.58
CHMP4CQ96CF2 RN7SKP122-201ENST00000515923 296 ntBASIC5.17□□□□□ -1.58
CHMP4CQ96CF2 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.17□□□□□ -1.58
CHMP4CQ96CF2 AC087276.1-201ENST00000529659 480 ntBASIC5.17□□□□□ -1.58
CHMP4CQ96CF2 AC136618.2-201ENST00000575091 400 ntBASIC5.17□□□□□ -1.58
CHMP4CQ96CF2 RPL23AP92-201ENST00000603609 255 ntBASIC5.17□□□□□ -1.58
CHMP4CQ96CF2 AC079587.1-201ENST00000603846 277 ntBASIC5.17□□□□□ -1.58
CHMP4CQ96CF2 AL022161.1-201ENST00000604390 213 ntBASIC5.17□□□□□ -1.58
CHMP4CQ96CF2 AC115621.1-201ENST00000604653 858 ntBASIC5.17□□□□□ -1.58
CHMP4CQ96CF2 AC135507.1-201ENST00000607214 561 ntBASIC5.17□□□□□ -1.58
CHMP4CQ96CF2 AC106028.5-201ENST00000610332 395 ntBASIC5.17□□□□□ -1.58
CHMP4CQ96CF2 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CHMP4CQ96CF2 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.17□□□□□ -1.58
CHMP4CQ96CF2 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.17□□□□□ -1.58
CHMP4CQ96CF2 AC006927.3-201ENST00000638789 384 ntBASIC5.17□□□□□ -1.58
CHMP4CQ96CF2 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHMP4CQ96CF2 ZNF833P-201ENST00000424938 1494 ntBASIC5.17□□□□□ -1.58
CHMP4CQ96CF2 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CHMP4CQ96CF2 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CHMP4CQ96CF2 AL139811.1-201ENST00000424779 2299 ntBASIC5.17□□□□□ -1.58
CHMP4CQ96CF2 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHMP4CQ96CF2 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHMP4CQ96CF2 NOL8P1-201ENST00000508336 3529 ntBASIC5.17□□□□□ -1.58
CHMP4CQ96CF2 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 AL356473.1-201ENST00000406203 1408 ntBASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 AC021755.1-201ENST00000559747 1447 ntBASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 AL121657.1-201ENST00000327215 531 ntBASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 SLC9B1P2-201ENST00000398120 1184 ntBASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 AC097374.1-203ENST00000400783 485 ntBASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 DHFRP6-201ENST00000401776 268 ntBASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 RPL7P8-201ENST00000411964 730 ntBASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 RPS23P10-201ENST00000416185 486 ntBASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 AC092647.1-201ENST00000420654 287 ntBASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms