Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.84□□□□□ -1.79
VPS33AQ96AX1 TMEM251P1-201ENST00000503717 318 ntBASIC3.84□□□□□ -1.79
VPS33AQ96AX1 WBP1LP4-201ENST00000505043 344 ntBASIC3.84□□□□□ -1.79
VPS33AQ96AX1 AC093853.1-201ENST00000515689 483 ntBASIC3.84□□□□□ -1.79
VPS33AQ96AX1 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.84□□□□□ -1.79
VPS33AQ96AX1 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.84□□□□□ -1.79
VPS33AQ96AX1 AC137768.1-201ENST00000549998 553 ntBASIC3.84□□□□□ -1.79
VPS33AQ96AX1 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.84□□□□□ -1.79
VPS33AQ96AX1 AC025627.2-201ENST00000576220 160 ntBASIC3.84□□□□□ -1.79
VPS33AQ96AX1 AC022662.1-201ENST00000580252 331 ntBASIC3.84□□□□□ -1.79
VPS33AQ96AX1 MAGOH2P-202ENST00000584384 429 ntBASIC3.84□□□□□ -1.79
VPS33AQ96AX1 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.84□□□□□ -1.79
VPS33AQ96AX1 CCDC58P3-201ENST00000590792 430 ntBASIC3.84□□□□□ -1.79
VPS33AQ96AX1 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC3.84□□□□□ -1.79
VPS33AQ96AX1 AC004987.4-201ENST00000603383 338 ntBASIC3.84□□□□□ -1.79
VPS33AQ96AX1 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.84□□□□□ -1.79
VPS33AQ96AX1 AL591424.2-201ENST00000617023 128 ntBASIC3.84□□□□□ -1.79
VPS33AQ96AX1 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.84□□□□□ -1.79
VPS33AQ96AX1 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.84□□□□□ -1.79
VPS33AQ96AX1 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
VPS33AQ96AX1 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
VPS33AQ96AX1 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.84□□□□□ -1.8
VPS33AQ96AX1 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.84□□□□□ -1.8
VPS33AQ96AX1 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
VPS33AQ96AX1 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.83□□□□□ -1.8
VPS33AQ96AX1 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
VPS33AQ96AX1 UBE3AP2-201ENST00000429033 2259 ntBASIC3.83□□□□□ -1.8
VPS33AQ96AX1 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.83□□□□□ -1.8
VPS33AQ96AX1 OR11H4-201ENST00000315409 1082 ntBASIC3.83□□□□□ -1.8
VPS33AQ96AX1 Y_RNA.192-201ENST00000363977 102 ntBASIC3.83□□□□□ -1.8
VPS33AQ96AX1 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS33AQ96AX1 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
VPS33AQ96AX1 AL133270.1-201ENST00000402635 279 ntBASIC3.83□□□□□ -1.8
VPS33AQ96AX1 MIR1251-201ENST00000408552 70 ntBASIC3.83□□□□□ -1.8
VPS33AQ96AX1 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS33AQ96AX1 AC092447.6-201ENST00000414578 210 ntBASIC3.83□□□□□ -1.8
VPS33AQ96AX1 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS33AQ96AX1 OR1AA1P-201ENST00000419597 916 ntBASIC3.83□□□□□ -1.8
VPS33AQ96AX1 AC016712.1-201ENST00000431088 378 ntBASIC3.83□□□□□ -1.8
VPS33AQ96AX1 KCTD9P3-201ENST00000434597 1169 ntBASIC3.83□□□□□ -1.8
VPS33AQ96AX1 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.83□□□□□ -1.8
VPS33AQ96AX1 RPS4XP4-201ENST00000443195 763 ntBASIC3.83□□□□□ -1.8
VPS33AQ96AX1 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS33AQ96AX1 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.83□□□□□ -1.8
VPS33AQ96AX1 AL162151.2-201ENST00000448875 158 ntBASIC3.83□□□□□ -1.8
VPS33AQ96AX1 RPL21P134-201ENST00000453468 483 ntBASIC3.83□□□□□ -1.8
VPS33AQ96AX1 snoU13.4-201ENST00000458916 104 ntBASIC3.83□□□□□ -1.8
VPS33AQ96AX1 RPL7L1P8-201ENST00000469911 741 ntBASIC3.83□□□□□ -1.8
VPS33AQ96AX1 AC007537.2-201ENST00000472093 511 ntBASIC3.83□□□□□ -1.8
VPS33AQ96AX1 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS33AQ96AX1 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS33AQ96AX1 BTF3L4P4-201ENST00000506381 449 ntBASIC3.83□□□□□ -1.8
VPS33AQ96AX1 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS33AQ96AX1 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS33AQ96AX1 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.83□□□□□ -1.8
VPS33AQ96AX1 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS33AQ96AX1 AC092593.2-201ENST00000513866 913 ntBASIC3.83□□□□□ -1.8
VPS33AQ96AX1 AC099522.1-202ENST00000514718 367 ntBASIC3.83□□□□□ -1.8
VPS33AQ96AX1 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VPS33AQ96AX1 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.83□□□□□ -1.8
VPS33AQ96AX1 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS33AQ96AX1 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.83□□□□□ -1.8
VPS33AQ96AX1 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.83□□□□□ -1.8
VPS33AQ96AX1 AC051619.2-201ENST00000559063 397 ntBASIC3.83□□□□□ -1.8
VPS33AQ96AX1 AC053481.3-201ENST00000577881 843 ntBASIC3.83□□□□□ -1.8
VPS33AQ96AX1 DUXAP3-201ENST00000603616 594 ntBASIC3.83□□□□□ -1.8
VPS33AQ96AX1 BNIP3P11-201ENST00000603878 563 ntBASIC3.83□□□□□ -1.8
VPS33AQ96AX1 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
VPS33AQ96AX1 AL360181.4-201ENST00000621752 134 ntBASIC3.83□□□□□ -1.8
VPS33AQ96AX1 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.83□□□□□ -1.8
VPS33AQ96AX1 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
VPS33AQ96AX1 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
VPS33AQ96AX1 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
VPS33AQ96AX1 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VPS33AQ96AX1 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.83□□□□□ -1.8
VPS33AQ96AX1 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VPS33AQ96AX1 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.83□□□□□ -1.8
VPS33AQ96AX1 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
VPS33AQ96AX1 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
VPS33AQ96AX1 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.82□□□□□ -1.8
VPS33AQ96AX1 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VPS33AQ96AX1 AL356473.1-201ENST00000406203 1408 ntBASIC3.82□□□□□ -1.8
VPS33AQ96AX1 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VPS33AQ96AX1 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
VPS33AQ96AX1 Y_RNA.311-201ENST00000365068 96 ntBASIC3.82□□□□□ -1.8
VPS33AQ96AX1 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
VPS33AQ96AX1 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
VPS33AQ96AX1 HMGN2P8-201ENST00000391458 268 ntBASIC3.82□□□□□ -1.8
VPS33AQ96AX1 AC011933.1-201ENST00000413334 321 ntBASIC3.82□□□□□ -1.8
VPS33AQ96AX1 AC245052.5-201ENST00000416320 649 ntBASIC3.82□□□□□ -1.8
VPS33AQ96AX1 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.82□□□□□ -1.8
VPS33AQ96AX1 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.82□□□□□ -1.8
VPS33AQ96AX1 CBX1P1-201ENST00000440184 427 ntBASIC3.82□□□□□ -1.8
VPS33AQ96AX1 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.82□□□□□ -1.8
VPS33AQ96AX1 AL500522.2-201ENST00000448562 343 ntBASIC3.82□□□□□ -1.8
VPS33AQ96AX1 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.82□□□□□ -1.8
VPS33AQ96AX1 HMGN2P16-201ENST00000456802 261 ntBASIC3.82□□□□□ -1.8
VPS33AQ96AX1 AC116533.1-201ENST00000459748 321 ntBASIC3.82□□□□□ -1.8
VPS33AQ96AX1 MTND1P16-201ENST00000465177 898 ntBASIC3.82□□□□□ -1.8
VPS33AQ96AX1 RPL7P1-201ENST00000468161 747 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms