Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 SDHCP3-201ENST00000445371 506 ntBASIC6.01□□□□□ -1.45
HPS1Q92902 RPLP0P1-201ENST00000457002 361 ntBASIC6.01□□□□□ -1.45
HPS1Q92902 AC019084.1-201ENST00000457337 432 ntBASIC6.01□□□□□ -1.45
HPS1Q92902 AC087477.1-201ENST00000465747 340 ntBASIC6.01□□□□□ -1.45
HPS1Q92902 AC091982.1-202ENST00000473923 343 ntBASIC6.01□□□□□ -1.45
HPS1Q92902 RPL7P47-201ENST00000497299 556 ntBASIC6.01□□□□□ -1.45
HPS1Q92902 SNORA58-201ENST00000505219 137 ntBASIC6.01□□□□□ -1.45
HPS1Q92902 AC112484.3-201ENST00000505910 329 ntBASIC6.01□□□□□ -1.45
HPS1Q92902 NDUFB4P9-201ENST00000511646 388 ntBASIC6.01□□□□□ -1.45
HPS1Q92902 RN7SKP96-201ENST00000516948 297 ntBASIC6.01□□□□□ -1.45
HPS1Q92902 AC131935.1-201ENST00000524621 333 ntBASIC6.01□□□□□ -1.45
HPS1Q92902 HMGN2P47-201ENST00000559378 272 ntBASIC6.01□□□□□ -1.45
HPS1Q92902 RN7SL32P-201ENST00000580514 281 ntBASIC6.01□□□□□ -1.45
HPS1Q92902 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC6.01□□□□□ -1.45
HPS1Q92902 AL078605.1-201ENST00000603529 500 ntBASIC6.01□□□□□ -1.45
HPS1Q92902 MIR1244-1-201ENST00000612829 85 ntBASIC6.01□□□□□ -1.45
HPS1Q92902 U1.25-201ENST00000614085 162 ntBASIC6.01□□□□□ -1.45
HPS1Q92902 U1.34-201ENST00000618578 162 ntBASIC6.01□□□□□ -1.45
HPS1Q92902 U1.31-201ENST00000620022 160 ntBASIC6.01□□□□□ -1.45
HPS1Q92902 MIR1244-3-201ENST00000635744 85 ntBASIC6.01□□□□□ -1.45
HPS1Q92902 MIR1244-2-201ENST00000636449 85 ntBASIC6.01□□□□□ -1.45
HPS1Q92902 MIR1244-4-202ENST00000636813 85 ntBASIC6.01□□□□□ -1.45
HPS1Q92902 AC140479.2-201ENST00000421567 3130 ntBASIC6.01□□□□□ -1.45
HPS1Q92902 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HPS1Q92902 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HPS1Q92902 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC6.01□□□□□ -1.45
HPS1Q92902 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.01□□□□□ -1.45
HPS1Q92902 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HPS1Q92902 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
HPS1Q92902 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
HPS1Q92902 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
HPS1Q92902 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HPS1Q92902 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
HPS1Q92902 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
HPS1Q92902 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6□□□□□ -1.45
HPS1Q92902 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HPS1Q92902 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
HPS1Q92902 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HPS1Q92902 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
HPS1Q92902 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
HPS1Q92902 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6□□□□□ -1.45
HPS1Q92902 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
HPS1Q92902 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6□□□□□ -1.45
HPS1Q92902 AC107081.3-201ENST00000612715 2034 ntBASIC6□□□□□ -1.45
HPS1Q92902 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC6□□□□□ -1.45
HPS1Q92902 SNORA70.5-201ENST00000365519 135 ntBASIC6□□□□□ -1.45
HPS1Q92902 LCN1P2-201ENST00000372030 223 ntBASIC6□□□□□ -1.45
HPS1Q92902 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6□□□□□ -1.45
HPS1Q92902 RNU6ATAC15P-201ENST00000408279 121 ntBASIC6□□□□□ -1.45
HPS1Q92902 U3.39-201ENST00000408569 239 ntBASIC6□□□□□ -1.45
HPS1Q92902 RNA5SP280-201ENST00000411230 115 ntBASIC6□□□□□ -1.45
HPS1Q92902 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC6□□□□□ -1.45
HPS1Q92902 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC6□□□□□ -1.45
HPS1Q92902 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6□□□□□ -1.45
HPS1Q92902 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6□□□□□ -1.45
HPS1Q92902 AL513124.1-201ENST00000450410 614 ntBASIC6□□□□□ -1.45
HPS1Q92902 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC6□□□□□ -1.45
HPS1Q92902 AC005517.1-201ENST00000452091 489 ntBASIC6□□□□□ -1.45
HPS1Q92902 SNORD121B-201ENST00000458838 81 ntBASIC6□□□□□ -1.45
HPS1Q92902 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC6□□□□□ -1.45
HPS1Q92902 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6□□□□□ -1.45
HPS1Q92902 RPS27P26-201ENST00000494583 239 ntBASIC6□□□□□ -1.45
HPS1Q92902 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC6□□□□□ -1.45
HPS1Q92902 SCARNA6-201ENST00000515982 265 ntBASIC6□□□□□ -1.45
HPS1Q92902 RNU6-64P-201ENST00000517119 105 ntBASIC6□□□□□ -1.45
HPS1Q92902 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC6□□□□□ -1.45
HPS1Q92902 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6□□□□□ -1.45
HPS1Q92902 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6□□□□□ -1.45
HPS1Q92902 AP006587.5-201ENST00000532033 739 ntBASIC6□□□□□ -1.45
HPS1Q92902 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6□□□□□ -1.45
HPS1Q92902 AC007494.1-201ENST00000562293 760 ntBASIC6□□□□□ -1.45
HPS1Q92902 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6□□□□□ -1.45
HPS1Q92902 uc_338.9-201ENST00000617424 182 ntBASIC6□□□□□ -1.45
HPS1Q92902 AC087894.3-201ENST00000623682 349 ntBASIC6□□□□□ -1.45
HPS1Q92902 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HPS1Q92902 GABPAP-201ENST00000419271 1356 ntBASIC6□□□□□ -1.45
HPS1Q92902 EEF1A1P36-201ENST00000427807 1351 ntBASIC6□□□□□ -1.45
HPS1Q92902 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6□□□□□ -1.45
HPS1Q92902 AL121768.1-201ENST00000613917 2544 ntBASIC6□□□□□ -1.45
HPS1Q92902 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HPS1Q92902 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
HPS1Q92902 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
HPS1Q92902 AC093671.1-201ENST00000624981 2929 ntBASIC6□□□□□ -1.45
HPS1Q92902 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC6□□□□□ -1.45
HPS1Q92902 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6□□□□□ -1.45
HPS1Q92902 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6□□□□□ -1.45
HPS1Q92902 AC079753.1-201ENST00000623243 3868 ntBASIC5.99□□□□□ -1.45
HPS1Q92902 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
HPS1Q92902 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HPS1Q92902 AP000560.1-201ENST00000624150 1937 ntBASIC5.99□□□□□ -1.45
HPS1Q92902 AC025470.1-201ENST00000510053 2032 ntBASIC5.99□□□□□ -1.45
HPS1Q92902 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
HPS1Q92902 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.99□□□□□ -1.45
HPS1Q92902 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.99□□□□□ -1.45
HPS1Q92902 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.99□□□□□ -1.45
HPS1Q92902 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HPS1Q92902 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HPS1Q92902 AL355834.1-201ENST00000556602 3965 ntBASIC5.99□□□□□ -1.45
HPS1Q92902 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.99□□□□□ -1.45
HPS1Q92902 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms