Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC131902.3-201ENST00000611767 581 ntBASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 AL359535.1-201ENST00000612100 1087 ntBASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 AC025588.4-201ENST00000615802 908 ntBASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 AC068722.2-201ENST00000618734 544 ntBASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 AC091953.3-201ENST00000623220 236 ntBASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 SNORD113.2-201ENST00000364166 89 ntBASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 SNORA70F-201ENST00000384142 135 ntBASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 SNORA51.6-201ENST00000384151 125 ntBASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 Y_RNA.582-201ENST00000391023 95 ntBASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 AL583835.1-201ENST00000399570 407 ntBASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 EIF5P1-201ENST00000400019 1231 ntBASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 RPS3AP23-201ENST00000401762 784 ntBASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 Y_RNA.598-201ENST00000410480 95 ntBASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 AC009302.1-201ENST00000417147 390 ntBASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 USP9YP13-201ENST00000417797 480 ntBASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 EIF1P1-201ENST00000421436 341 ntBASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 AC234779.1-201ENST00000425910 285 ntBASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 AC109583.1-201ENST00000432156 268 ntBASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 AC114495.1-201ENST00000441274 436 ntBASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 MTND1P1-201ENST00000445453 368 ntBASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 AC239809.1-201ENST00000450470 217 ntBASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 USP9YP12-201ENST00000450481 570 ntBASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 AC093392.2-201ENST00000450682 337 ntBASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 TRBV26-201ENST00000456572 344 ntBASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 RPL21P126-201ENST00000470049 478 ntBASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 TMED11P-201ENST00000479478 690 ntBASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 LARP1BP2-201ENST00000486594 519 ntBASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 FAM172BP-201ENST00000487497 1089 ntBASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 AC023424.2-201ENST00000493479 777 ntBASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 AC005726.1-201ENST00000494679 427 ntBASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 AC108145.1-201ENST00000503770 153 ntBASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 KCTD9P2-201ENST00000512203 1013 ntBASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 MTCYBP41-201ENST00000528913 1123 ntBASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 OR5BC1P-201ENST00000529327 739 ntBASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 AL352979.3-201ENST00000553515 247 ntBASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 LARP7P2-201ENST00000575306 125 ntBASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 MIR544B-201ENST00000582372 78 ntBASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 MIR4307-201ENST00000582802 84 ntBASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 AC110743.1-201ENST00000584870 478 ntBASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 BNIP3P8-201ENST00000597863 560 ntBASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 AC005191.1-201ENST00000603950 358 ntBASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ATG4AQ8WYN0 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 AC097504.1-201ENST00000515103 2415 ntBASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 RPL23AP57-201ENST00000332361 466 ntBASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 DHFRP6-201ENST00000401776 268 ntBASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 RPL31P52-201ENST00000407532 367 ntBASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 MIR1305-201ENST00000408300 86 ntBASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.49□□□□□ -1.69
ATG4AQ8WYN0 UQCRBP1-201ENST00000421129 336 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms