Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC114947.2-201ENST00000565748 2125 ntBASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 AL078621.3-201ENST00000623707 2042 ntBASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 AC091953.2-201ENST00000623979 160 ntBASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 AC239868.2-201ENST00000564237 4527 ntBASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 AC009962.1-201ENST00000567327 3813 ntBASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 AC006600.2-201ENST00000624834 2506 ntBASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 MTND5P10-201ENST00000603719 1809 ntBASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 AC004656.1-201ENST00000568479 4951 ntBASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 AC105074.1-201ENST00000623380 3095 ntBASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 OR52E6-202ENST00000379946 954 ntBASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 RNU6-1032P-201ENST00000384100 107 ntBASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 AL035666.1-201ENST00000446195 348 ntBASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 ELOCP24-201ENST00000456370 334 ntBASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 SNORD125-201ENST00000459538 96 ntBASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 APOOP2-201ENST00000461561 539 ntBASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 RNU4-29P-201ENST00000515943 174 ntBASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 Y_RNA.682-201ENST00000516457 100 ntBASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 RN7SKP66-201ENST00000516681 231 ntBASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 AP000676.2-201ENST00000529711 301 ntBASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 AC114546.3-201ENST00000623582 1734 ntBASIC5.6□□□□□ -1.51
SHKBP1Q8TBC3 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
SHKBP1Q8TBC3 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SHKBP1Q8TBC3 VPS35P1-201ENST00000563400 1518 ntBASIC5.59□□□□□ -1.51
SHKBP1Q8TBC3 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.59□□□□□ -1.51
SHKBP1Q8TBC3 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.59□□□□□ -1.51
SHKBP1Q8TBC3 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
SHKBP1Q8TBC3 AL121839.2-201ENST00000565058 6943 ntBASIC5.59□□□□□ -1.51
SHKBP1Q8TBC3 ZNF652P1-201ENST00000442420 1309 ntBASIC5.59□□□□□ -1.51
SHKBP1Q8TBC3 RNU6-26P-201ENST00000383985 107 ntBASIC5.59□□□□□ -1.51
SHKBP1Q8TBC3 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.59□□□□□ -1.51
SHKBP1Q8TBC3 MIR548F5-201ENST00000408421 86 ntBASIC5.59□□□□□ -1.51
SHKBP1Q8TBC3 RNU2-28P-201ENST00000410457 189 ntBASIC5.59□□□□□ -1.51
SHKBP1Q8TBC3 RN7SKP126-201ENST00000411143 300 ntBASIC5.59□□□□□ -1.51
SHKBP1Q8TBC3 AC078974.1-201ENST00000411597 223 ntBASIC5.59□□□□□ -1.51
SHKBP1Q8TBC3 AC093162.1-201ENST00000419682 124 ntBASIC5.59□□□□□ -1.51
SHKBP1Q8TBC3 RPL31P12-201ENST00000422587 358 ntBASIC5.59□□□□□ -1.51
SHKBP1Q8TBC3 AC007283.2-201ENST00000424739 197 ntBASIC5.59□□□□□ -1.51
SHKBP1Q8TBC3 AL669831.1-202ENST00000428504 417 ntBASIC5.59□□□□□ -1.51
SHKBP1Q8TBC3 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.59□□□□□ -1.51
SHKBP1Q8TBC3 HMGB3P10-201ENST00000434734 572 ntBASIC5.59□□□□□ -1.51
SHKBP1Q8TBC3 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.59□□□□□ -1.51
SHKBP1Q8TBC3 TXNP1-201ENST00000441872 371 ntBASIC5.59□□□□□ -1.51
SHKBP1Q8TBC3 H2AFZP6-201ENST00000444403 394 ntBASIC5.59□□□□□ -1.51
SHKBP1Q8TBC3 DDX3P2-201ENST00000446138 111 ntBASIC5.59□□□□□ -1.51
SHKBP1Q8TBC3 SLC25A18P1-201ENST00000449385 454 ntBASIC5.59□□□□□ -1.51
SHKBP1Q8TBC3 Z92846.1-201ENST00000456203 268 ntBASIC5.59□□□□□ -1.51
SHKBP1Q8TBC3 RN7SL197P-201ENST00000466981 299 ntBASIC5.59□□□□□ -1.51
SHKBP1Q8TBC3 AC009127.1-201ENST00000467090 155 ntBASIC5.59□□□□□ -1.51
SHKBP1Q8TBC3 AC092754.1-201ENST00000472975 479 ntBASIC5.59□□□□□ -1.51
SHKBP1Q8TBC3 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.59□□□□□ -1.51
SHKBP1Q8TBC3 MTCYBP40-201ENST00000509390 1135 ntBASIC5.59□□□□□ -1.51
SHKBP1Q8TBC3 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC5.59□□□□□ -1.51
SHKBP1Q8TBC3 GAPDHP62-201ENST00000515313 990 ntBASIC5.59□□□□□ -1.51
SHKBP1Q8TBC3 RNU6-864P-201ENST00000516256 108 ntBASIC5.59□□□□□ -1.51
SHKBP1Q8TBC3 RNU6-714P-201ENST00000516963 103 ntBASIC5.59□□□□□ -1.51
SHKBP1Q8TBC3 AC009812.2-201ENST00000517657 457 ntBASIC5.59□□□□□ -1.51
SHKBP1Q8TBC3 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.59□□□□□ -1.51
SHKBP1Q8TBC3 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.59□□□□□ -1.51
SHKBP1Q8TBC3 AC024940.3-201ENST00000538551 316 ntBASIC5.59□□□□□ -1.51
SHKBP1Q8TBC3 OR4T1P-201ENST00000554933 911 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms