Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 AC114814.2-201ENST00000419195 485 ntBASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 AC019097.1-201ENST00000424783 735 ntBASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 AL590399.4-201ENST00000436561 601 ntBASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 AC097493.1-201ENST00000463958 372 ntBASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 RPL32P9-201ENST00000487963 407 ntBASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 AC090572.1-201ENST00000519251 160 ntBASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 MIR5690-201ENST00000583739 73 ntBASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 TEX41-238ENST00000604253 709 ntTSL 5 BASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 AC011626.1-201ENST00000604710 562 ntBASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 DNM1P47-203ENST00000571780 12667 ntBASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 BCORP1-203ENST00000513194 5093 ntBASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 TANK-205ENST00000405852 2155 ntTSL 5 BASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 Y_RNA.80-201ENST00000362996 102 ntBASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 Y_RNA.180-201ENST00000363867 113 ntBASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 U3.12-201ENST00000364498 214 ntBASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 Y_RNA.252-201ENST00000364556 101 ntBASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 SNORA20.2-201ENST00000383922 131 ntBASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 RNU6-432P-201ENST00000384196 109 ntBASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 RNU4-31P-201ENST00000384211 141 ntBASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 RNU6-310P-201ENST00000384655 107 ntBASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 MIR105-1-201ENST00000385222 81 ntBASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 MIR765-201ENST00000390226 114 ntBASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 AL445529.1-201ENST00000398713 389 ntBASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 MIR320C1-201ENST00000408566 88 ntBASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 AL136133.1-201ENST00000413694 376 ntBASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 RPL23AP27-201ENST00000415161 451 ntBASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 UQCRBP1-201ENST00000421129 336 ntBASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 MTND5P15-201ENST00000434246 349 ntBASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 AC099670.2-201ENST00000435130 321 ntBASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 FABP5P14-201ENST00000437273 393 ntBASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 PTMAP6-201ENST00000439110 327 ntBASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 AL359672.1-201ENST00000442302 409 ntBASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 AC007967.1-201ENST00000455422 1159 ntBASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 Z92846.1-201ENST00000456203 268 ntBASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 AL356010.1-201ENST00000456364 102 ntBASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 AC079168.1-201ENST00000458741 345 ntBASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 RPL7P15-201ENST00000461190 712 ntBASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 AC008571.1-201ENST00000467232 300 ntBASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 AC093815.1-201ENST00000508637 280 ntBASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 RN7SKP24-201ENST00000515888 284 ntBASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 IMMP1LP2-201ENST00000552954 492 ntBASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 MIR3128-201ENST00000581957 66 ntBASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 AC006157.1-201ENST00000611750 366 ntBASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 AC007546.1-201ENST00000619452 559 ntBASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 ZNF652P1-201ENST00000442420 1309 ntBASIC6.23□□□□□ -1.41
NEDD1Q8NHV4 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.22□□□□□ -1.41
NEDD1Q8NHV4 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
NEDD1Q8NHV4 MSL3P1-202ENST00000440028 1468 ntBASIC6.22□□□□□ -1.41
NEDD1Q8NHV4 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
NEDD1Q8NHV4 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
NEDD1Q8NHV4 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
NEDD1Q8NHV4 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC6.22□□□□□ -1.41
NEDD1Q8NHV4 AC092070.2-203ENST00000598377 3644 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms