Protein–RNA interactions for Protein: Q8NEV1

CSNK2A3, Casein kinase II subunit alpha 3, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A3Q8NEV1 CYP4A43P-201ENST00000568156 121 ntBASIC3.81□□□□□ -1.8
CSNK2A3Q8NEV1 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.81□□□□□ -1.8
CSNK2A3Q8NEV1 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.81□□□□□ -1.8
CSNK2A3Q8NEV1 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.81□□□□□ -1.8
CSNK2A3Q8NEV1 AC040904.1-201ENST00000590850 223 ntBASIC3.81□□□□□ -1.8
CSNK2A3Q8NEV1 AL031985.2-201ENST00000600955 480 ntBASIC3.81□□□□□ -1.8
CSNK2A3Q8NEV1 AP001981.2-201ENST00000603241 418 ntBASIC3.81□□□□□ -1.8
CSNK2A3Q8NEV1 AC092354.1-201ENST00000606057 376 ntBASIC3.81□□□□□ -1.8
CSNK2A3Q8NEV1 AL031775.1-201ENST00000607014 887 ntBASIC3.81□□□□□ -1.8
CSNK2A3Q8NEV1 Z98200.1-201ENST00000607298 470 ntBASIC3.81□□□□□ -1.8
CSNK2A3Q8NEV1 AC080013.4-201ENST00000607624 649 ntBASIC3.81□□□□□ -1.8
CSNK2A3Q8NEV1 AL391497.1-201ENST00000608671 547 ntBASIC3.81□□□□□ -1.8
CSNK2A3Q8NEV1 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.81□□□□□ -1.8
CSNK2A3Q8NEV1 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.81□□□□□ -1.8
CSNK2A3Q8NEV1 uc_338.32-201ENST00000615087 172 ntBASIC3.81□□□□□ -1.8
CSNK2A3Q8NEV1 AC073968.1-201ENST00000618594 637 ntBASIC3.81□□□□□ -1.8
CSNK2A3Q8NEV1 AC004009.2-201ENST00000623016 728 ntBASIC3.81□□□□□ -1.8
CSNK2A3Q8NEV1 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.81□□□□□ -1.8
CSNK2A3Q8NEV1 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.81□□□□□ -1.8
CSNK2A3Q8NEV1 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CSNK2A3Q8NEV1 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.81□□□□□ -1.8
CSNK2A3Q8NEV1 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.81□□□□□ -1.8
CSNK2A3Q8NEV1 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CSNK2A3Q8NEV1 MARK2P15-201ENST00000432204 2186 ntBASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 AC021755.1-201ENST00000559747 1447 ntBASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 AC011266.1-201ENST00000624119 3569 ntBASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 SNORA58B-201ENST00000364259 136 ntBASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 RNU6-339P-201ENST00000384310 107 ntBASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 RPS3AP23-201ENST00000401762 784 ntBASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 RN7SKP182-201ENST00000410772 298 ntBASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 RPS20P14-201ENST00000412545 360 ntBASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 HMGB1P11-201ENST00000413899 637 ntBASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 FNDC3CP-201ENST00000420795 1155 ntBASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 AC012065.2-201ENST00000421295 375 ntBASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 BX119904.4-201ENST00000424402 301 ntBASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 MTCO2P16-201ENST00000436962 677 ntBASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 HLA-N-201ENST00000437516 135 ntBASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 AL831737.1-201ENST00000441288 271 ntBASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 HSPE1P28-201ENST00000443139 211 ntBASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 ARL2BPP10-201ENST00000446487 531 ntBASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 EPS15P1-201ENST00000448836 336 ntBASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 AC093809.1-201ENST00000509155 340 ntBASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 AC006499.6-201ENST00000511169 607 ntBASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 RNA5SP309-201ENST00000516670 106 ntBASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 AC084824.1-201ENST00000550917 1005 ntBASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 AP001004.1-201ENST00000582468 324 ntBASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 AC008507.1-201ENST00000587506 734 ntBASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 AC103710.4-201ENST00000609301 899 ntBASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 AL121873.1-201ENST00000616013 524 ntBASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 AC006065.5-201ENST00000623427 349 ntBASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 NUP58P1-201ENST00000502546 1738 ntBASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CSNK2A3Q8NEV1 NMD3P1-201ENST00000439704 1488 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 AL356473.1-201ENST00000406203 1408 ntBASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CSNK2A3Q8NEV1 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms