Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AC016727.1-205ENST00000605437 569 ntBASIC5.13□□□□□ -1.59
SYNE4Q8N205 AC018816.2-201ENST00000621460 353 ntBASIC5.13□□□□□ -1.59
SYNE4Q8N205 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.13□□□□□ -1.59
SYNE4Q8N205 AC127502.3-201ENST00000636170 1206 ntBASIC5.13□□□□□ -1.59
SYNE4Q8N205 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SYNE4Q8N205 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SYNE4Q8N205 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SYNE4Q8N205 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
SYNE4Q8N205 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SYNE4Q8N205 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SYNE4Q8N205 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SYNE4Q8N205 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SYNE4Q8N205 RNF6P1-201ENST00000444889 1784 ntBASIC5.12□□□□□ -1.59
SYNE4Q8N205 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SYNE4Q8N205 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.12□□□□□ -1.59
SYNE4Q8N205 RNY3P10-201ENST00000384764 102 ntBASIC5.12□□□□□ -1.59
SYNE4Q8N205 SNORD65.1-201ENST00000390889 71 ntBASIC5.12□□□□□ -1.59
SYNE4Q8N205 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.12□□□□□ -1.59
SYNE4Q8N205 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SYNE4Q8N205 AC245052.5-201ENST00000416320 649 ntBASIC5.12□□□□□ -1.59
SYNE4Q8N205 CCDC58P2-201ENST00000417131 366 ntBASIC5.12□□□□□ -1.59
SYNE4Q8N205 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.12□□□□□ -1.59
SYNE4Q8N205 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.12□□□□□ -1.59
SYNE4Q8N205 AL691449.1-201ENST00000426570 421 ntBASIC5.12□□□□□ -1.59
SYNE4Q8N205 USP9YP31-201ENST00000431405 881 ntBASIC5.12□□□□□ -1.59
SYNE4Q8N205 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC5.12□□□□□ -1.59
SYNE4Q8N205 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.12□□□□□ -1.59
SYNE4Q8N205 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SYNE4Q8N205 FGF7P6-202ENST00000451282 293 ntBASIC5.12□□□□□ -1.59
SYNE4Q8N205 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.12□□□□□ -1.59
SYNE4Q8N205 AL591473.1-201ENST00000464297 313 ntBASIC5.12□□□□□ -1.59
SYNE4Q8N205 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC5.12□□□□□ -1.59
SYNE4Q8N205 AC072039.1-201ENST00000477611 581 ntBASIC5.12□□□□□ -1.59
SYNE4Q8N205 AC116337.2-201ENST00000477662 156 ntBASIC5.12□□□□□ -1.59
SYNE4Q8N205 AC110792.1-201ENST00000491826 472 ntBASIC5.12□□□□□ -1.59
SYNE4Q8N205 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.12□□□□□ -1.59
SYNE4Q8N205 ARL2BPP4-201ENST00000506854 471 ntBASIC5.12□□□□□ -1.59
SYNE4Q8N205 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.12□□□□□ -1.59
SYNE4Q8N205 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.12□□□□□ -1.59
SYNE4Q8N205 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SYNE4Q8N205 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.12□□□□□ -1.59
SYNE4Q8N205 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC5.12□□□□□ -1.59
SYNE4Q8N205 MIR7973-1-201ENST00000614683 76 ntBASIC5.12□□□□□ -1.59
SYNE4Q8N205 AC090517.2-201ENST00000614966 680 ntBASIC5.12□□□□□ -1.59
SYNE4Q8N205 OR5AK4P-201ENST00000635912 903 ntBASIC5.12□□□□□ -1.59
SYNE4Q8N205 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
SYNE4Q8N205 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
SYNE4Q8N205 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
SYNE4Q8N205 AC005539.1-201ENST00000443768 1479 ntBASIC5.12□□□□□ -1.59
SYNE4Q8N205 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SYNE4Q8N205 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
SYNE4Q8N205 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SYNE4Q8N205 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
SYNE4Q8N205 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
SYNE4Q8N205 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SYNE4Q8N205 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.11□□□□□ -1.59
SYNE4Q8N205 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SYNE4Q8N205 BTF3P7-201ENST00000407097 488 ntBASIC5.11□□□□□ -1.59
SYNE4Q8N205 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.11□□□□□ -1.59
SYNE4Q8N205 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.11□□□□□ -1.59
SYNE4Q8N205 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC5.11□□□□□ -1.59
SYNE4Q8N205 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.11□□□□□ -1.59
SYNE4Q8N205 MTND4P28-201ENST00000426217 387 ntBASIC5.11□□□□□ -1.59
SYNE4Q8N205 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.11□□□□□ -1.59
SYNE4Q8N205 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC5.11□□□□□ -1.59
SYNE4Q8N205 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.11□□□□□ -1.59
SYNE4Q8N205 MTND1P28-201ENST00000435623 950 ntBASIC5.11□□□□□ -1.59
SYNE4Q8N205 SNRPEP8-201ENST00000442866 260 ntBASIC5.11□□□□□ -1.59
SYNE4Q8N205 EEF1E1P1-201ENST00000446998 430 ntBASIC5.11□□□□□ -1.59
SYNE4Q8N205 COX6CP18-201ENST00000448769 222 ntBASIC5.11□□□□□ -1.59
SYNE4Q8N205 AL591363.1-201ENST00000450091 483 ntBASIC5.11□□□□□ -1.59
SYNE4Q8N205 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC5.11□□□□□ -1.59
SYNE4Q8N205 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
SYNE4Q8N205 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC5.11□□□□□ -1.59
SYNE4Q8N205 AC109445.1-201ENST00000512356 383 ntBASIC5.11□□□□□ -1.59
SYNE4Q8N205 AC005832.3-201ENST00000537929 631 ntBASIC5.11□□□□□ -1.59
SYNE4Q8N205 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC5.11□□□□□ -1.59
SYNE4Q8N205 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SYNE4Q8N205 AC009852.2-201ENST00000567898 485 ntBASIC5.11□□□□□ -1.59
SYNE4Q8N205 MIR548AB-201ENST00000584917 84 ntBASIC5.11□□□□□ -1.59
SYNE4Q8N205 AC069545.1-201ENST00000605671 358 ntBASIC5.11□□□□□ -1.59
SYNE4Q8N205 AC004067.1-201ENST00000608733 700 ntBASIC5.11□□□□□ -1.59
SYNE4Q8N205 AC106028.5-201ENST00000610332 395 ntBASIC5.11□□□□□ -1.59
SYNE4Q8N205 AC084757.4-201ENST00000616350 526 ntBASIC5.11□□□□□ -1.59
SYNE4Q8N205 AC104985.2-201ENST00000620598 500 ntBASIC5.11□□□□□ -1.59
SYNE4Q8N205 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC5.11□□□□□ -1.59
SYNE4Q8N205 AC138965.3-201ENST00000623875 498 ntBASIC5.11□□□□□ -1.59
SYNE4Q8N205 AL356596.1-201ENST00000624230 379 ntBASIC5.11□□□□□ -1.59
SYNE4Q8N205 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.11□□□□□ -1.59
SYNE4Q8N205 AC099063.3-201ENST00000642066 185 ntBASIC5.11□□□□□ -1.59
SYNE4Q8N205 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC5.11□□□□□ -1.59
SYNE4Q8N205 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
SYNE4Q8N205 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.11□□□□□ -1.59
SYNE4Q8N205 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
SYNE4Q8N205 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.11□□□□□ -1.59
SYNE4Q8N205 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SYNE4Q8N205 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SYNE4Q8N205 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SYNE4Q8N205 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.11□□□□□ -1.59
SYNE4Q8N205 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms