Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.28□□□□□ -1.88
CDKL3Q8IVW4 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.28□□□□□ -1.88
CDKL3Q8IVW4 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.28□□□□□ -1.88
CDKL3Q8IVW4 AC004972.1-201ENST00000623934 2209 ntBASIC3.28□□□□□ -1.88
CDKL3Q8IVW4 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDKL3Q8IVW4 MTND5P24-201ENST00000438892 1767 ntBASIC3.28□□□□□ -1.89
CDKL3Q8IVW4 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CDKL3Q8IVW4 U3.6-201ENST00000363622 211 ntBASIC3.27□□□□□ -1.89
CDKL3Q8IVW4 SNORD115-48-201ENST00000364764 76 ntBASIC3.27□□□□□ -1.89
CDKL3Q8IVW4 SAR1AP2-201ENST00000392696 594 ntBASIC3.27□□□□□ -1.89
CDKL3Q8IVW4 AL354719.1-201ENST00000406535 843 ntBASIC3.27□□□□□ -1.89
CDKL3Q8IVW4 AC063979.1-201ENST00000415539 377 ntBASIC3.27□□□□□ -1.89
CDKL3Q8IVW4 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CDKL3Q8IVW4 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.27□□□□□ -1.89
CDKL3Q8IVW4 LINC01347-201ENST00000417964 355 ntBASIC3.27□□□□□ -1.89
CDKL3Q8IVW4 FO393419.3-201ENST00000428741 282 ntBASIC3.27□□□□□ -1.89
CDKL3Q8IVW4 HMGB3P6-201ENST00000444896 598 ntBASIC3.27□□□□□ -1.89
CDKL3Q8IVW4 ELOCP23-201ENST00000452014 332 ntBASIC3.27□□□□□ -1.89
CDKL3Q8IVW4 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.27□□□□□ -1.89
CDKL3Q8IVW4 AC008155.2-201ENST00000464337 397 ntBASIC3.27□□□□□ -1.89
CDKL3Q8IVW4 RN7SL293P-201ENST00000481765 281 ntBASIC3.27□□□□□ -1.89
CDKL3Q8IVW4 AC110794.1-201ENST00000505816 425 ntBASIC3.27□□□□□ -1.89
CDKL3Q8IVW4 MTCO2P32-201ENST00000514865 403 ntBASIC3.27□□□□□ -1.89
CDKL3Q8IVW4 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.27□□□□□ -1.89
CDKL3Q8IVW4 SNORA31.13-201ENST00000516624 135 ntBASIC3.27□□□□□ -1.89
CDKL3Q8IVW4 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.27□□□□□ -1.89
CDKL3Q8IVW4 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.27□□□□□ -1.89
CDKL3Q8IVW4 NCAPGP2-201ENST00000557911 754 ntBASIC3.27□□□□□ -1.89
CDKL3Q8IVW4 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.27□□□□□ -1.89
CDKL3Q8IVW4 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.27□□□□□ -1.89
CDKL3Q8IVW4 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.27□□□□□ -1.89
CDKL3Q8IVW4 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.27□□□□□ -1.89
CDKL3Q8IVW4 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
CDKL3Q8IVW4 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.27□□□□□ -1.89
CDKL3Q8IVW4 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
CDKL3Q8IVW4 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDKL3Q8IVW4 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDKL3Q8IVW4 SNORA70.4-201ENST00000365509 134 ntBASIC3.26□□□□□ -1.89
CDKL3Q8IVW4 TAF9BP1-201ENST00000396646 746 ntBASIC3.26□□□□□ -1.89
CDKL3Q8IVW4 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
CDKL3Q8IVW4 RNU2-21P-201ENST00000410368 188 ntBASIC3.26□□□□□ -1.89
CDKL3Q8IVW4 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.26□□□□□ -1.89
CDKL3Q8IVW4 AC069157.1-201ENST00000421749 137 ntBASIC3.26□□□□□ -1.89
CDKL3Q8IVW4 MTND4P24-201ENST00000424002 397 ntBASIC3.26□□□□□ -1.89
CDKL3Q8IVW4 RPL21P66-201ENST00000426566 466 ntBASIC3.26□□□□□ -1.89
CDKL3Q8IVW4 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.26□□□□□ -1.89
CDKL3Q8IVW4 OR51AB1P-201ENST00000429046 620 ntBASIC3.26□□□□□ -1.89
CDKL3Q8IVW4 ZNF965P-201ENST00000432501 817 ntBASIC3.26□□□□□ -1.89
CDKL3Q8IVW4 ZFAND6P1-201ENST00000434138 605 ntBASIC3.26□□□□□ -1.89
CDKL3Q8IVW4 AC097499.1-201ENST00000444277 208 ntBASIC3.26□□□□□ -1.89
CDKL3Q8IVW4 RPL6P5-201ENST00000445678 828 ntBASIC3.26□□□□□ -1.89
CDKL3Q8IVW4 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.26□□□□□ -1.89
CDKL3Q8IVW4 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.26□□□□□ -1.89
CDKL3Q8IVW4 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.26□□□□□ -1.89
CDKL3Q8IVW4 OR52A4P-202ENST00000481634 799 ntBASIC3.26□□□□□ -1.89
CDKL3Q8IVW4 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.26□□□□□ -1.89
CDKL3Q8IVW4 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.26□□□□□ -1.89
CDKL3Q8IVW4 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.26□□□□□ -1.89
CDKL3Q8IVW4 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.26□□□□□ -1.89
CDKL3Q8IVW4 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.26□□□□□ -1.89
CDKL3Q8IVW4 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.26□□□□□ -1.89
CDKL3Q8IVW4 RPL21P12-201ENST00000559810 515 ntBASIC3.26□□□□□ -1.89
CDKL3Q8IVW4 MIR3944-201ENST00000581277 108 ntBASIC3.26□□□□□ -1.89
CDKL3Q8IVW4 CKS1BP3-201ENST00000600888 237 ntBASIC3.26□□□□□ -1.89
CDKL3Q8IVW4 AC003001.2-201ENST00000616294 831 ntBASIC3.26□□□□□ -1.89
CDKL3Q8IVW4 AC025016.1-201ENST00000616746 682 ntBASIC3.26□□□□□ -1.89
CDKL3Q8IVW4 AC004777.1-201ENST00000624317 287 ntBASIC3.26□□□□□ -1.89
CDKL3Q8IVW4 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CDKL3Q8IVW4 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CDKL3Q8IVW4 AC011978.2-201ENST00000569835 2054 ntBASIC3.26□□□□□ -1.89
CDKL3Q8IVW4 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
CDKL3Q8IVW4 OR1S2-201ENST00000302592 978 ntBASIC3.25□□□□□ -1.89
CDKL3Q8IVW4 SNORD51.1-201ENST00000365405 77 ntBASIC3.25□□□□□ -1.89
CDKL3Q8IVW4 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CDKL3Q8IVW4 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CDKL3Q8IVW4 MIR23A-201ENST00000385245 73 ntBASIC3.25□□□□□ -1.89
CDKL3Q8IVW4 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CDKL3Q8IVW4 AL583834.1-201ENST00000406943 343 ntBASIC3.25□□□□□ -1.89
CDKL3Q8IVW4 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.25□□□□□ -1.89
CDKL3Q8IVW4 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.25□□□□□ -1.89
CDKL3Q8IVW4 AL691517.1-201ENST00000440833 1235 ntBASIC3.25□□□□□ -1.89
CDKL3Q8IVW4 HMGB1P48-201ENST00000446155 598 ntBASIC3.25□□□□□ -1.89
CDKL3Q8IVW4 AC069540.1-201ENST00000446320 988 ntBASIC3.25□□□□□ -1.89
CDKL3Q8IVW4 AC092685.1-201ENST00000447960 1243 ntBASIC3.25□□□□□ -1.89
CDKL3Q8IVW4 AC093278.1-201ENST00000494700 600 ntBASIC3.25□□□□□ -1.89
CDKL3Q8IVW4 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.25□□□□□ -1.89
CDKL3Q8IVW4 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.25□□□□□ -1.89
CDKL3Q8IVW4 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CDKL3Q8IVW4 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.25□□□□□ -1.89
CDKL3Q8IVW4 MTND2P26-201ENST00000528255 1029 ntBASIC3.25□□□□□ -1.89
CDKL3Q8IVW4 AC004923.2-201ENST00000529649 369 ntBASIC3.25□□□□□ -1.89
CDKL3Q8IVW4 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.25□□□□□ -1.89
CDKL3Q8IVW4 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.25□□□□□ -1.89
CDKL3Q8IVW4 CKS1BP1-201ENST00000555221 240 ntBASIC3.25□□□□□ -1.89
CDKL3Q8IVW4 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.25□□□□□ -1.89
CDKL3Q8IVW4 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.25□□□□□ -1.89
CDKL3Q8IVW4 ZNF415P1-201ENST00000582279 1166 ntBASIC3.25□□□□□ -1.89
CDKL3Q8IVW4 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.25□□□□□ -1.89
CDKL3Q8IVW4 NTAN1P1-201ENST00000603150 646 ntBASIC3.25□□□□□ -1.89
CDKL3Q8IVW4 AC015849.2-201ENST00000605738 409 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms