Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 MTND4P34-201ENST00000572715 1371 ntBASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 RNA5SP295-201ENST00000362655 121 ntBASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 RNA5SP197-201ENST00000363357 119 ntBASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 RNU6-444P-201ENST00000383988 108 ntBASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 U8.11-201ENST00000384699 133 ntBASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 U8.12-201ENST00000384701 133 ntBASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 AL583834.1-201ENST00000406943 343 ntBASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 AC007899.1-201ENST00000412776 775 ntBASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 CRYBB2P1-203ENST00000415709 538 ntBASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 MOB1AP2-201ENST00000446060 614 ntBASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 Z99127.3-201ENST00000448158 395 ntBASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 AC115115.1-201ENST00000449927 248 ntBASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 Z99714.1-201ENST00000450463 807 ntBASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 SNORD105B-201ENST00000458770 79 ntBASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 U8.18-201ENST00000459285 133 ntBASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 AC008379.1-201ENST00000463655 464 ntBASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 AC091564.1-201ENST00000464563 479 ntBASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 MTCO2P9-201ENST00000503214 694 ntBASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 AC008628.1-201ENST00000508663 265 ntBASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 AC010265.1-201ENST00000513509 211 ntBASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 SCARNA20.6-201ENST00000517251 106 ntBASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 AC245166.1-201ENST00000521012 253 ntBASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 AC124283.4-201ENST00000581815 456 ntBASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 OR4G1P-201ENST00000588632 938 ntBASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 AC020914.6-201ENST00000594327 272 ntBASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 AC092474.3-201ENST00000603022 568 ntBASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 AL391497.1-201ENST00000608671 547 ntBASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 AP004247.3-201ENST00000608682 624 ntBASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 uc_338.1-201ENST00000612113 180 ntBASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 SNORD39.4-201ENST00000620099 78 ntBASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 AL356321.1-201ENST00000621360 228 ntBASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.3□□□□□ -1.88
NUDCD3Q8IVD9 AL359893.1-201ENST00000447628 1580 ntBASIC3.29□□□□□ -1.88
NUDCD3Q8IVD9 ZNF849P-201ENST00000594711 1566 ntBASIC3.29□□□□□ -1.88
NUDCD3Q8IVD9 PABPC1P7-201ENST00000413177 1513 ntBASIC3.29□□□□□ -1.88
NUDCD3Q8IVD9 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NUDCD3Q8IVD9 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NUDCD3Q8IVD9 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
NUDCD3Q8IVD9 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NUDCD3Q8IVD9 Y_RNA.110-201ENST00000363220 99 ntBASIC3.29□□□□□ -1.88
NUDCD3Q8IVD9 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.29□□□□□ -1.88
NUDCD3Q8IVD9 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
NUDCD3Q8IVD9 RNU2-72P-201ENST00000411175 163 ntBASIC3.29□□□□□ -1.88
NUDCD3Q8IVD9 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NUDCD3Q8IVD9 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.29□□□□□ -1.88
NUDCD3Q8IVD9 AL035423.1-201ENST00000420331 213 ntBASIC3.29□□□□□ -1.88
NUDCD3Q8IVD9 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.29□□□□□ -1.88
NUDCD3Q8IVD9 AL158053.1-201ENST00000441503 453 ntBASIC3.29□□□□□ -1.88
NUDCD3Q8IVD9 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.29□□□□□ -1.88
NUDCD3Q8IVD9 NF1P3-201ENST00000457709 450 ntBASIC3.29□□□□□ -1.88
NUDCD3Q8IVD9 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.29□□□□□ -1.88
NUDCD3Q8IVD9 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.29□□□□□ -1.88
NUDCD3Q8IVD9 RNU6-334P-201ENST00000517072 102 ntBASIC3.29□□□□□ -1.88
NUDCD3Q8IVD9 AP001207.2-201ENST00000519490 539 ntBASIC3.29□□□□□ -1.88
NUDCD3Q8IVD9 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.29□□□□□ -1.88
NUDCD3Q8IVD9 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.29□□□□□ -1.88
NUDCD3Q8IVD9 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
NUDCD3Q8IVD9 TRAV37-201ENST00000553906 342 ntBASIC3.29□□□□□ -1.88
NUDCD3Q8IVD9 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.29□□□□□ -1.88
NUDCD3Q8IVD9 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.29□□□□□ -1.88
NUDCD3Q8IVD9 AC107982.3-201ENST00000584957 985 ntBASIC3.29□□□□□ -1.88
NUDCD3Q8IVD9 VN1R85P-201ENST00000601587 426 ntBASIC3.29□□□□□ -1.88
NUDCD3Q8IVD9 AC133794.1-201ENST00000602731 914 ntBASIC3.29□□□□□ -1.88
NUDCD3Q8IVD9 AL009028.1-201ENST00000604895 802 ntBASIC3.29□□□□□ -1.88
NUDCD3Q8IVD9 AC016877.3-201ENST00000606778 504 ntBASIC3.29□□□□□ -1.88
NUDCD3Q8IVD9 MIR7851-201ENST00000610611 160 ntBASIC3.29□□□□□ -1.88
NUDCD3Q8IVD9 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.29□□□□□ -1.88
NUDCD3Q8IVD9 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
NUDCD3Q8IVD9 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.29□□□□□ -1.88
NUDCD3Q8IVD9 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.29□□□□□ -1.88
NUDCD3Q8IVD9 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.29□□□□□ -1.88
NUDCD3Q8IVD9 AC118273.1-201ENST00000525324 3006 ntBASIC3.29□□□□□ -1.88
NUDCD3Q8IVD9 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
NUDCD3Q8IVD9 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.29□□□□□ -1.88
NUDCD3Q8IVD9 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NUDCD3Q8IVD9 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.28□□□□□ -1.88
NUDCD3Q8IVD9 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
NUDCD3Q8IVD9 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms