Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 RPL23AP11-201ENST00000475260 469 ntBASIC2.72□□□□□ -1.97
LRRC28Q86X40 AC109925.1-201ENST00000478069 331 ntBASIC2.72□□□□□ -1.97
LRRC28Q86X40 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC2.72□□□□□ -1.97
LRRC28Q86X40 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC2.72□□□□□ -1.97
LRRC28Q86X40 RNU6-319P-201ENST00000516025 108 ntBASIC2.72□□□□□ -1.97
LRRC28Q86X40 RN7SKP57-201ENST00000517248 293 ntBASIC2.72□□□□□ -1.97
LRRC28Q86X40 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.72□□□□□ -1.97
LRRC28Q86X40 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.72□□□□□ -1.97
LRRC28Q86X40 CENPUP2-201ENST00000555897 1186 ntBASIC2.72□□□□□ -1.97
LRRC28Q86X40 RPL21P12-201ENST00000559810 515 ntBASIC2.72□□□□□ -1.97
LRRC28Q86X40 MTCO3P13-201ENST00000577757 781 ntBASIC2.72□□□□□ -1.97
LRRC28Q86X40 MIR5004-201ENST00000579078 107 ntBASIC2.72□□□□□ -1.97
LRRC28Q86X40 AC017100.2-201ENST00000584628 355 ntBASIC2.72□□□□□ -1.97
LRRC28Q86X40 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.72□□□□□ -1.97
LRRC28Q86X40 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.72□□□□□ -1.97
LRRC28Q86X40 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC2.72□□□□□ -1.97
LRRC28Q86X40 AL391834.1-201ENST00000609609 560 ntBASIC2.72□□□□□ -1.97
LRRC28Q86X40 AC117490.2-201ENST00000610042 594 ntBASIC2.72□□□□□ -1.97
LRRC28Q86X40 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
LRRC28Q86X40 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC2.72□□□□□ -1.97
LRRC28Q86X40 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.72□□□□□ -1.97
LRRC28Q86X40 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
LRRC28Q86X40 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
LRRC28Q86X40 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.72□□□□□ -1.97
LRRC28Q86X40 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
LRRC28Q86X40 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
LRRC28Q86X40 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.97
LRRC28Q86X40 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.97
LRRC28Q86X40 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
LRRC28Q86X40 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
LRRC28Q86X40 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
LRRC28Q86X40 RNU6-670P-201ENST00000364312 104 ntBASIC2.71□□□□□ -1.98
LRRC28Q86X40 RNU6-1251P-201ENST00000364502 107 ntBASIC2.71□□□□□ -1.98
LRRC28Q86X40 AC240504.1-201ENST00000395709 845 ntBASIC2.71□□□□□ -1.98
LRRC28Q86X40 RNU2-71P-201ENST00000411395 189 ntBASIC2.71□□□□□ -1.98
LRRC28Q86X40 RFESDP1-201ENST00000422350 461 ntBASIC2.71□□□□□ -1.98
LRRC28Q86X40 AL353678.1-201ENST00000422735 741 ntBASIC2.71□□□□□ -1.98
LRRC28Q86X40 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.71□□□□□ -1.98
LRRC28Q86X40 RPL7P52-201ENST00000449200 742 ntBASIC2.71□□□□□ -1.98
LRRC28Q86X40 GSTA11P-201ENST00000452866 669 ntBASIC2.71□□□□□ -1.98
LRRC28Q86X40 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.71□□□□□ -1.98
LRRC28Q86X40 AC017015.1-201ENST00000477387 286 ntBASIC2.71□□□□□ -1.98
LRRC28Q86X40 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
LRRC28Q86X40 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
LRRC28Q86X40 AC093755.1-201ENST00000512950 1023 ntBASIC2.71□□□□□ -1.98
LRRC28Q86X40 RNA5SP76-201ENST00000516277 87 ntBASIC2.71□□□□□ -1.98
LRRC28Q86X40 RNU6-711P-201ENST00000517255 106 ntBASIC2.71□□□□□ -1.98
LRRC28Q86X40 AC025857.1-201ENST00000525252 377 ntBASIC2.71□□□□□ -1.98
LRRC28Q86X40 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.71□□□□□ -1.98
LRRC28Q86X40 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.71□□□□□ -1.98
LRRC28Q86X40 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC2.71□□□□□ -1.98
LRRC28Q86X40 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.71□□□□□ -1.98
LRRC28Q86X40 ZNF415P1-201ENST00000582279 1166 ntBASIC2.71□□□□□ -1.98
LRRC28Q86X40 AC083760.1-201ENST00000589621 670 ntBASIC2.71□□□□□ -1.98
LRRC28Q86X40 AC138473.1-201ENST00000605717 526 ntBASIC2.71□□□□□ -1.98
LRRC28Q86X40 AC107871.2-201ENST00000612894 502 ntBASIC2.71□□□□□ -1.98
LRRC28Q86X40 AC231759.1-201ENST00000616455 597 ntBASIC2.71□□□□□ -1.98
LRRC28Q86X40 MIR8057-201ENST00000620957 69 ntBASIC2.71□□□□□ -1.98
LRRC28Q86X40 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
LRRC28Q86X40 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
LRRC28Q86X40 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
LRRC28Q86X40 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.71□□□□□ -1.98
LRRC28Q86X40 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.71□□□□□ -1.98
LRRC28Q86X40 CNOT6LP1-201ENST00000559681 1462 ntBASIC2.71□□□□□ -1.98
LRRC28Q86X40 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
LRRC28Q86X40 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.7□□□□□ -1.98
LRRC28Q86X40 MIR181B1-201ENST00000385240 110 ntBASIC2.7□□□□□ -1.98
LRRC28Q86X40 MIR320B1-201ENST00000390209 79 ntBASIC2.7□□□□□ -1.98
LRRC28Q86X40 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.7□□□□□ -1.98
LRRC28Q86X40 RPL7P10-201ENST00000417407 739 ntBASIC2.7□□□□□ -1.98
LRRC28Q86X40 VDAC1P3-201ENST00000434069 851 ntBASIC2.7□□□□□ -1.98
LRRC28Q86X40 AL592437.1-201ENST00000443781 492 ntBASIC2.7□□□□□ -1.98
LRRC28Q86X40 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC2.7□□□□□ -1.98
LRRC28Q86X40 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.7□□□□□ -1.98
LRRC28Q86X40 RN7SL504P-201ENST00000494496 287 ntBASIC2.7□□□□□ -1.98
LRRC28Q86X40 AP000926.3-201ENST00000497201 299 ntBASIC2.7□□□□□ -1.98
LRRC28Q86X40 KLHL2P1-201ENST00000508691 521 ntBASIC2.7□□□□□ -1.98
LRRC28Q86X40 RNU6-56P-201ENST00000516986 93 ntBASIC2.7□□□□□ -1.98
LRRC28Q86X40 AC104986.1-201ENST00000517978 436 ntBASIC2.7□□□□□ -1.98
LRRC28Q86X40 AC022616.2-201ENST00000523185 300 ntBASIC2.7□□□□□ -1.98
LRRC28Q86X40 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.7□□□□□ -1.98
LRRC28Q86X40 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.7□□□□□ -1.98
LRRC28Q86X40 MIR2682-201ENST00000580305 110 ntBASIC2.7□□□□□ -1.98
LRRC28Q86X40 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.7□□□□□ -1.98
LRRC28Q86X40 AC006504.3-201ENST00000586818 523 ntBASIC2.7□□□□□ -1.98
LRRC28Q86X40 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC2.7□□□□□ -1.98
LRRC28Q86X40 AC015849.2-201ENST00000605738 409 ntBASIC2.7□□□□□ -1.98
LRRC28Q86X40 AL137246.1-201ENST00000607072 977 ntBASIC2.7□□□□□ -1.98
LRRC28Q86X40 AC138932.5-201ENST00000617759 563 ntBASIC2.7□□□□□ -1.98
LRRC28Q86X40 Z99129.2-201ENST00000619967 314 ntBASIC2.7□□□□□ -1.98
LRRC28Q86X40 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LRRC28Q86X40 AC092447.7-201ENST00000422212 1621 ntBASIC2.7□□□□□ -1.98
LRRC28Q86X40 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.7□□□□□ -1.98
LRRC28Q86X40 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
LRRC28Q86X40 AP002907.1-201ENST00000606361 1430 ntBASIC2.69□□□□□ -1.98
LRRC28Q86X40 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.69□□□□□ -1.98
LRRC28Q86X40 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
LRRC28Q86X40 RNA5SP129-201ENST00000410276 118 ntBASIC2.69□□□□□ -1.98
LRRC28Q86X40 RNU2-6P-201ENST00000411404 190 ntBASIC2.69□□□□□ -1.98
LRRC28Q86X40 AL451074.5-201ENST00000415894 435 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms