Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RNF44Q7L0R7 PCAT14-202ENST00000627127 3935 ntBASIC4.41□□□□□ -1.7
RNF44Q7L0R7 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.41□□□□□ -1.7
RNF44Q7L0R7 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.41□□□□□ -1.7
RNF44Q7L0R7 AC009951.1-201ENST00000623674 2614 ntBASIC4.41□□□□□ -1.7
RNF44Q7L0R7 AC108467.2-201ENST00000617640 1597 ntBASIC4.4□□□□□ -1.7
RNF44Q7L0R7 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
RNF44Q7L0R7 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RNF44Q7L0R7 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
RNF44Q7L0R7 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RNF44Q7L0R7 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.7
RNF44Q7L0R7 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.7
RNF44Q7L0R7 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RNF44Q7L0R7 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
RNF44Q7L0R7 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.4□□□□□ -1.71
RNF44Q7L0R7 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
RNF44Q7L0R7 RNU1-83P-201ENST00000363426 164 ntBASIC4.4□□□□□ -1.71
RNF44Q7L0R7 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RNF44Q7L0R7 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.4□□□□□ -1.71
RNF44Q7L0R7 RNU6-1207P-201ENST00000384343 107 ntBASIC4.4□□□□□ -1.71
RNF44Q7L0R7 RNU6-821P-201ENST00000390995 107 ntBASIC4.4□□□□□ -1.71
RNF44Q7L0R7 Y_RNA.598-201ENST00000410480 95 ntBASIC4.4□□□□□ -1.71
RNF44Q7L0R7 HMGN1P14-201ENST00000412459 517 ntBASIC4.4□□□□□ -1.71
RNF44Q7L0R7 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.4□□□□□ -1.71
RNF44Q7L0R7 RPL36AP10-201ENST00000421785 322 ntBASIC4.4□□□□□ -1.71
RNF44Q7L0R7 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.4□□□□□ -1.71
RNF44Q7L0R7 AC006548.1-201ENST00000427470 102 ntBASIC4.4□□□□□ -1.71
RNF44Q7L0R7 USP9YP14-201ENST00000430663 563 ntBASIC4.4□□□□□ -1.71
RNF44Q7L0R7 SKP1P1-201ENST00000438081 489 ntBASIC4.4□□□□□ -1.71
RNF44Q7L0R7 Z95327.1-201ENST00000446082 482 ntBASIC4.4□□□□□ -1.71
RNF44Q7L0R7 PDSS1P2-201ENST00000449397 678 ntBASIC4.4□□□□□ -1.71
RNF44Q7L0R7 PPIAP3-201ENST00000450588 505 ntBASIC4.4□□□□□ -1.71
RNF44Q7L0R7 ISCUP1-201ENST00000454451 448 ntBASIC4.4□□□□□ -1.71
RNF44Q7L0R7 SNORD42A-201ENST00000459584 64 ntBASIC4.4□□□□□ -1.71
RNF44Q7L0R7 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RNF44Q7L0R7 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RNF44Q7L0R7 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.4□□□□□ -1.71
RNF44Q7L0R7 AC108064.1-201ENST00000513791 460 ntBASIC4.4□□□□□ -1.71
RNF44Q7L0R7 RNU6-1003P-201ENST00000517099 105 ntBASIC4.4□□□□□ -1.71
RNF44Q7L0R7 PAICSP4-201ENST00000517543 1253 ntBASIC4.4□□□□□ -1.71
RNF44Q7L0R7 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.4□□□□□ -1.71
RNF44Q7L0R7 AC022878.1-201ENST00000530684 149 ntBASIC4.4□□□□□ -1.71
RNF44Q7L0R7 AP001781.1-201ENST00000530977 207 ntBASIC4.4□□□□□ -1.71
RNF44Q7L0R7 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.4□□□□□ -1.71
RNF44Q7L0R7 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.4□□□□□ -1.71
RNF44Q7L0R7 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.4□□□□□ -1.71
RNF44Q7L0R7 LSM3P2-201ENST00000551246 273 ntBASIC4.4□□□□□ -1.71
RNF44Q7L0R7 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RNF44Q7L0R7 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.4□□□□□ -1.71
RNF44Q7L0R7 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.4□□□□□ -1.71
RNF44Q7L0R7 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.4□□□□□ -1.71
RNF44Q7L0R7 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.4□□□□□ -1.71
RNF44Q7L0R7 RN7SL52P-201ENST00000584271 284 ntBASIC4.4□□□□□ -1.71
RNF44Q7L0R7 RN7SL435P-201ENST00000584418 282 ntBASIC4.4□□□□□ -1.71
RNF44Q7L0R7 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.4□□□□□ -1.71
RNF44Q7L0R7 AC078795.2-201ENST00000602835 1252 ntBASIC4.4□□□□□ -1.71
RNF44Q7L0R7 AC112191.3-201ENST00000604371 277 ntBASIC4.4□□□□□ -1.71
RNF44Q7L0R7 AL451044.1-201ENST00000604867 238 ntBASIC4.4□□□□□ -1.71
RNF44Q7L0R7 AC004853.1-201ENST00000604902 698 ntBASIC4.4□□□□□ -1.71
RNF44Q7L0R7 AC019193.2-201ENST00000610012 634 ntBASIC4.4□□□□□ -1.71
RNF44Q7L0R7 AC013562.2-201ENST00000611632 603 ntBASIC4.4□□□□□ -1.71
RNF44Q7L0R7 RN7SL722P-201ENST00000617780 284 ntBASIC4.4□□□□□ -1.71
RNF44Q7L0R7 U73479.1-201ENST00000618062 168 ntBASIC4.4□□□□□ -1.71
RNF44Q7L0R7 RN7SL565P-201ENST00000618246 284 ntBASIC4.4□□□□□ -1.71
RNF44Q7L0R7 CR381572.1-201ENST00000625098 102 ntBASIC4.4□□□□□ -1.71
RNF44Q7L0R7 AL392088.2-201ENST00000637607 285 ntBASIC4.4□□□□□ -1.71
RNF44Q7L0R7 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.4□□□□□ -1.71
RNF44Q7L0R7 AC010266.2-201ENST00000564741 3255 ntBASIC4.4□□□□□ -1.71
RNF44Q7L0R7 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RNF44Q7L0R7 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.4□□□□□ -1.71
RNF44Q7L0R7 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RNF44Q7L0R7 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RNF44Q7L0R7 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RNF44Q7L0R7 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
RNF44Q7L0R7 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.39□□□□□ -1.71
RNF44Q7L0R7 OR56B2P-202ENST00000641377 2453 ntBASIC4.39□□□□□ -1.71
RNF44Q7L0R7 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RNF44Q7L0R7 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.39□□□□□ -1.71
RNF44Q7L0R7 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RNF44Q7L0R7 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RNF44Q7L0R7 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RNF44Q7L0R7 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNF44Q7L0R7 RNY4P24-201ENST00000362735 96 ntBASIC4.39□□□□□ -1.71
RNF44Q7L0R7 RNU6-348P-201ENST00000384386 107 ntBASIC4.39□□□□□ -1.71
RNF44Q7L0R7 MIR129-1-201ENST00000384972 72 ntBASIC4.39□□□□□ -1.71
RNF44Q7L0R7 SNORA40.3-201ENST00000390964 122 ntBASIC4.39□□□□□ -1.71
RNF44Q7L0R7 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC4.39□□□□□ -1.71
RNF44Q7L0R7 RNU2-16P-201ENST00000410712 136 ntBASIC4.39□□□□□ -1.71
RNF44Q7L0R7 RNU4-78P-201ENST00000410940 126 ntBASIC4.39□□□□□ -1.71
RNF44Q7L0R7 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.39□□□□□ -1.71
RNF44Q7L0R7 UQCRBP1-201ENST00000421129 336 ntBASIC4.39□□□□□ -1.71
RNF44Q7L0R7 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.39□□□□□ -1.71
RNF44Q7L0R7 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.39□□□□□ -1.71
RNF44Q7L0R7 AL031667.1-201ENST00000440222 725 ntBASIC4.39□□□□□ -1.71
RNF44Q7L0R7 AC092641.1-201ENST00000440229 772 ntBASIC4.39□□□□□ -1.71
RNF44Q7L0R7 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.39□□□□□ -1.71
RNF44Q7L0R7 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.39□□□□□ -1.71
RNF44Q7L0R7 Z82190.1-201ENST00000454534 490 ntBASIC4.39□□□□□ -1.71
RNF44Q7L0R7 TPT1P7-201ENST00000458300 517 ntBASIC4.39□□□□□ -1.71
RNF44Q7L0R7 snoU109.4-201ENST00000458953 143 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms