Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC1.74□□□□□ -2.13
VPS13DQ5THJ4 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC1.74□□□□□ -2.13
VPS13DQ5THJ4 SNORA36C-201ENST00000384289 132 ntBASIC1.74□□□□□ -2.13
VPS13DQ5THJ4 MIR181B1-201ENST00000385240 110 ntBASIC1.74□□□□□ -2.13
VPS13DQ5THJ4 AL137014.1-201ENST00000420490 1226 ntBASIC1.74□□□□□ -2.13
VPS13DQ5THJ4 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC1.74□□□□□ -2.13
VPS13DQ5THJ4 AC006539.3-201ENST00000454258 129 ntBASIC1.74□□□□□ -2.13
VPS13DQ5THJ4 AC078785.3-201ENST00000476607 425 ntBASIC1.74□□□□□ -2.13
VPS13DQ5THJ4 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC1.74□□□□□ -2.13
VPS13DQ5THJ4 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC1.74□□□□□ -2.13
VPS13DQ5THJ4 ZNF861P-201ENST00000588126 639 ntBASIC1.74□□□□□ -2.13
VPS13DQ5THJ4 AC067747.1-201ENST00000608026 250 ntBASIC1.74□□□□□ -2.13
VPS13DQ5THJ4 PISRT1-201ENST00000626175 531 ntBASIC1.74□□□□□ -2.13
VPS13DQ5THJ4 METTL8-218ENST00000638989 876 ntTSL 5 BASIC1.74□□□□□ -2.13
VPS13DQ5THJ4 METTL8-219ENST00000640734 726 ntTSL 2 BASIC1.74□□□□□ -2.13
VPS13DQ5THJ4 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
VPS13DQ5THJ4 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
VPS13DQ5THJ4 Y_RNA.4-201ENST00000362333 112 ntBASIC1.74□□□□□ -2.13
VPS13DQ5THJ4 FCF1P1-201ENST00000432690 571 ntBASIC1.74□□□□□ -2.13
VPS13DQ5THJ4 AC010881.1-201ENST00000433830 235 ntBASIC1.74□□□□□ -2.13
VPS13DQ5THJ4 AP000893.1-201ENST00000474462 794 ntBASIC1.74□□□□□ -2.13
VPS13DQ5THJ4 RN7SL636P-201ENST00000497504 294 ntBASIC1.74□□□□□ -2.13
VPS13DQ5THJ4 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC1.74□□□□□ -2.13
VPS13DQ5THJ4 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC1.74□□□□□ -2.13
VPS13DQ5THJ4 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
VPS13DQ5THJ4 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
VPS13DQ5THJ4 RNU6-805P-201ENST00000365643 106 ntBASIC1.74□□□□□ -2.13
VPS13DQ5THJ4 BTF3P7-201ENST00000407097 488 ntBASIC1.74□□□□□ -2.13
VPS13DQ5THJ4 RNU4-26P-201ENST00000410270 107 ntBASIC1.74□□□□□ -2.13
VPS13DQ5THJ4 RN7SKP192-201ENST00000411291 327 ntBASIC1.74□□□□□ -2.13
VPS13DQ5THJ4 FAR1P1-201ENST00000427163 934 ntBASIC1.74□□□□□ -2.13
VPS13DQ5THJ4 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC1.74□□□□□ -2.13
VPS13DQ5THJ4 RN7SKP272-201ENST00000516988 232 ntBASIC1.74□□□□□ -2.13
VPS13DQ5THJ4 HPRT1P3-201ENST00000539521 576 ntBASIC1.74□□□□□ -2.13
VPS13DQ5THJ4 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC1.74□□□□□ -2.13
VPS13DQ5THJ4 GMCL1P2-201ENST00000605230 823 ntBASIC1.74□□□□□ -2.13
VPS13DQ5THJ4 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
VPS13DQ5THJ4 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 MIR1183-201ENST00000408856 89 ntBASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 MTCO1P39-201ENST00000426148 480 ntBASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 AL391156.1-201ENST00000554965 554 ntBASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 AL590004.2-201ENST00000404787 371 ntBASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 MTCO1P51-201ENST00000427672 1060 ntBASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 RPL9P6-201ENST00000492764 598 ntBASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 LINC01355-201ENST00000566551 5444 ntBASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 SNORA80E-201ENST00000384744 137 ntBASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 MIR3074-201ENST00000384885 81 ntBASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 SNORA17.3-201ENST00000391159 129 ntBASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 MIR1287-201ENST00000408492 90 ntBASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 AMD1P2-201ENST00000412936 992 ntBASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 RPS15AP6-201ENST00000420703 385 ntBASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 AC008264.2-201ENST00000610193 3731 ntBASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 AL023284.1-201ENST00000403956 276 ntBASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 RANP7-201ENST00000418085 644 ntBASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 AL590639.1-201ENST00000456484 337 ntBASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 AC011492.1-201ENST00000600023 315 ntBASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 MIR1291-201ENST00000627649 87 ntBASIC1.73□□□□□ -2.13
VPS13DQ5THJ4 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
VPS13DQ5THJ4 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
VPS13DQ5THJ4 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC1.72□□□□□ -2.13
VPS13DQ5THJ4 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC1.72□□□□□ -2.13
VPS13DQ5THJ4 RFX3-203ENST00000381984 364 ntTSL 3 BASIC1.72□□□□□ -2.13
VPS13DQ5THJ4 RPL7P10-201ENST00000417407 739 ntBASIC1.72□□□□□ -2.13
VPS13DQ5THJ4 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.72□□□□□ -2.13
VPS13DQ5THJ4 Z98742.2-201ENST00000431564 187 ntBASIC1.72□□□□□ -2.13
VPS13DQ5THJ4 AC096638.1-201ENST00000444678 216 ntBASIC1.72□□□□□ -2.13
VPS13DQ5THJ4 UBE2V2P4-201ENST00000447495 259 ntBASIC1.72□□□□□ -2.13
VPS13DQ5THJ4 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC1.72□□□□□ -2.13
VPS13DQ5THJ4 RNA5SP76-201ENST00000516277 87 ntBASIC1.72□□□□□ -2.13
VPS13DQ5THJ4 HMGB3P26-201ENST00000560051 582 ntBASIC1.72□□□□□ -2.13
VPS13DQ5THJ4 AC016727.1-205ENST00000605437 569 ntBASIC1.72□□□□□ -2.13
VPS13DQ5THJ4 AC046143.2-201ENST00000609789 160 ntBASIC1.72□□□□□ -2.13
VPS13DQ5THJ4 MIR6733-201ENST00000635723 61 ntBASIC1.72□□□□□ -2.13
VPS13DQ5THJ4 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
VPS13DQ5THJ4 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.72□□□□□ -2.13
VPS13DQ5THJ4 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms