Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC002064.3-201ENST00000623448 346 ntBASIC2.67□□□□□ -1.98
CCDC58Q4VC31 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.67□□□□□ -1.98
CCDC58Q4VC31 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
CCDC58Q4VC31 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CCDC58Q4VC31 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CCDC58Q4VC31 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CCDC58Q4VC31 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CCDC58Q4VC31 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CCDC58Q4VC31 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC2.66□□□□□ -1.98
CCDC58Q4VC31 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CCDC58Q4VC31 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CCDC58Q4VC31 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CCDC58Q4VC31 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CCDC58Q4VC31 RNA5SP393-201ENST00000363423 117 ntBASIC2.66□□□□□ -1.98
CCDC58Q4VC31 RNU1-33P-201ENST00000364249 162 ntBASIC2.66□□□□□ -1.98
CCDC58Q4VC31 AL356057.2-201ENST00000403318 432 ntBASIC2.66□□□□□ -1.98
CCDC58Q4VC31 RNU4-65P-201ENST00000410473 140 ntBASIC2.66□□□□□ -1.98
CCDC58Q4VC31 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC58Q4VC31 EIF2S2P3-201ENST00000428356 999 ntBASIC2.66□□□□□ -1.98
CCDC58Q4VC31 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.66□□□□□ -1.98
CCDC58Q4VC31 AC127537.2-201ENST00000439258 465 ntBASIC2.66□□□□□ -1.98
CCDC58Q4VC31 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC58Q4VC31 H2AFZP6-201ENST00000444403 394 ntBASIC2.66□□□□□ -1.98
CCDC58Q4VC31 AL590399.6-201ENST00000446396 307 ntBASIC2.66□□□□□ -1.98
CCDC58Q4VC31 AL133547.1-201ENST00000448546 220 ntBASIC2.66□□□□□ -1.98
CCDC58Q4VC31 AC109925.1-201ENST00000478069 331 ntBASIC2.66□□□□□ -1.98
CCDC58Q4VC31 AC090525.1-201ENST00000479116 478 ntBASIC2.66□□□□□ -1.98
CCDC58Q4VC31 RN7SL297P-201ENST00000483161 293 ntBASIC2.66□□□□□ -1.98
CCDC58Q4VC31 AL024509.2-201ENST00000493462 493 ntBASIC2.66□□□□□ -1.98
CCDC58Q4VC31 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2.66□□□□□ -1.98
CCDC58Q4VC31 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CCDC58Q4VC31 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC58Q4VC31 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.66□□□□□ -1.98
CCDC58Q4VC31 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.66□□□□□ -1.98
CCDC58Q4VC31 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.66□□□□□ -1.98
CCDC58Q4VC31 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC58Q4VC31 SNORA31.1-201ENST00000515993 133 ntBASIC2.66□□□□□ -1.98
CCDC58Q4VC31 SNORA31.5-201ENST00000516190 133 ntBASIC2.66□□□□□ -1.98
CCDC58Q4VC31 RNA5SP468-201ENST00000516782 93 ntBASIC2.66□□□□□ -1.98
CCDC58Q4VC31 AC019227.1-201ENST00000526902 510 ntBASIC2.66□□□□□ -1.98
CCDC58Q4VC31 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC2.66□□□□□ -1.98
CCDC58Q4VC31 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.66□□□□□ -1.98
CCDC58Q4VC31 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC2.66□□□□□ -1.98
CCDC58Q4VC31 DUXAP3-201ENST00000603616 594 ntBASIC2.66□□□□□ -1.98
CCDC58Q4VC31 PRELID3BP8-201ENST00000604148 295 ntBASIC2.66□□□□□ -1.98
CCDC58Q4VC31 AC008962.1-201ENST00000605729 304 ntBASIC2.66□□□□□ -1.98
CCDC58Q4VC31 AC140725.3-201ENST00000616193 880 ntBASIC2.66□□□□□ -1.98
CCDC58Q4VC31 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.66□□□□□ -1.98
CCDC58Q4VC31 CYCSP41-201ENST00000616920 296 ntBASIC2.66□□□□□ -1.98
CCDC58Q4VC31 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CCDC58Q4VC31 AC099506.2-201ENST00000623074 221 ntBASIC2.66□□□□□ -1.98
CCDC58Q4VC31 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.66□□□□□ -1.98
CCDC58Q4VC31 AC010297.1-201ENST00000623948 149 ntBASIC2.66□□□□□ -1.98
CCDC58Q4VC31 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CCDC58Q4VC31 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CCDC58Q4VC31 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.66□□□□□ -1.98
CCDC58Q4VC31 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
CCDC58Q4VC31 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
CCDC58Q4VC31 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
CCDC58Q4VC31 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.65□□□□□ -1.98
CCDC58Q4VC31 AC073325.2-201ENST00000339545 159 ntBASIC2.65□□□□□ -1.99
CCDC58Q4VC31 RNU6-1180P-201ENST00000364935 107 ntBASIC2.65□□□□□ -1.99
CCDC58Q4VC31 RNU4-47P-201ENST00000410876 114 ntBASIC2.65□□□□□ -1.99
CCDC58Q4VC31 AC063979.1-201ENST00000415539 377 ntBASIC2.65□□□□□ -1.99
CCDC58Q4VC31 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC2.65□□□□□ -1.99
CCDC58Q4VC31 AC129850.1-201ENST00000436203 508 ntBASIC2.65□□□□□ -1.99
CCDC58Q4VC31 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
CCDC58Q4VC31 AL031663.1-201ENST00000437445 219 ntBASIC2.65□□□□□ -1.99
CCDC58Q4VC31 RPS29P6-201ENST00000438196 145 ntBASIC2.65□□□□□ -1.99
CCDC58Q4VC31 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC58Q4VC31 MTND2P8-201ENST00000450555 1025 ntBASIC2.65□□□□□ -1.99
CCDC58Q4VC31 HMGB1P25-201ENST00000468402 607 ntBASIC2.65□□□□□ -1.99
CCDC58Q4VC31 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC58Q4VC31 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC58Q4VC31 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.65□□□□□ -1.99
CCDC58Q4VC31 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC58Q4VC31 OSBPL9P3-201ENST00000534523 595 ntBASIC2.65□□□□□ -1.99
CCDC58Q4VC31 AC008083.2-201ENST00000546707 476 ntBASIC2.65□□□□□ -1.99
CCDC58Q4VC31 AC011611.1-201ENST00000552179 197 ntBASIC2.65□□□□□ -1.99
CCDC58Q4VC31 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.65□□□□□ -1.99
CCDC58Q4VC31 MIR4446-201ENST00000578505 67 ntBASIC2.65□□□□□ -1.99
CCDC58Q4VC31 AC007448.1-201ENST00000582714 234 ntBASIC2.65□□□□□ -1.99
CCDC58Q4VC31 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.65□□□□□ -1.99
CCDC58Q4VC31 AL049779.4-201ENST00000604500 156 ntBASIC2.65□□□□□ -1.99
CCDC58Q4VC31 AC100793.4-201ENST00000613683 429 ntBASIC2.65□□□□□ -1.99
CCDC58Q4VC31 AC002076.2-201ENST00000617362 122 ntBASIC2.65□□□□□ -1.99
CCDC58Q4VC31 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
CCDC58Q4VC31 AC138915.1-201ENST00000565427 1685 ntBASIC2.65□□□□□ -1.99
CCDC58Q4VC31 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.65□□□□□ -1.99
CCDC58Q4VC31 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
CCDC58Q4VC31 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.65□□□□□ -1.99
CCDC58Q4VC31 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
CCDC58Q4VC31 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC58Q4VC31 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
CCDC58Q4VC31 RNU6-799P-201ENST00000363567 107 ntBASIC2.64□□□□□ -1.99
CCDC58Q4VC31 RNU1-138P-201ENST00000384093 164 ntBASIC2.64□□□□□ -1.99
CCDC58Q4VC31 ARF4P3-201ENST00000397387 509 ntBASIC2.64□□□□□ -1.99
CCDC58Q4VC31 GSTA8P-201ENST00000404253 637 ntBASIC2.64□□□□□ -1.99
CCDC58Q4VC31 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC58Q4VC31 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms