Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC5.01□□□□□ -1.61
LONRF3Q496Y0 UBE2V1P3-201ENST00000439651 417 ntBASIC5.01□□□□□ -1.61
LONRF3Q496Y0 AL162591.2-201ENST00000449634 317 ntBASIC5.01□□□□□ -1.61
LONRF3Q496Y0 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC5.01□□□□□ -1.61
LONRF3Q496Y0 MTCO3P16-201ENST00000454456 754 ntBASIC5.01□□□□□ -1.61
LONRF3Q496Y0 AL672167.3-201ENST00000465951 960 ntBASIC5.01□□□□□ -1.61
LONRF3Q496Y0 SETP11-201ENST00000473027 690 ntBASIC5.01□□□□□ -1.61
LONRF3Q496Y0 AC068587.1-201ENST00000483613 781 ntBASIC5.01□□□□□ -1.61
LONRF3Q496Y0 DSTNP2-201ENST00000504533 515 ntBASIC5.01□□□□□ -1.61
LONRF3Q496Y0 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.01□□□□□ -1.61
LONRF3Q496Y0 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC5.01□□□□□ -1.61
LONRF3Q496Y0 AC090281.1-201ENST00000523019 276 ntBASIC5.01□□□□□ -1.61
LONRF3Q496Y0 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LONRF3Q496Y0 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC5.01□□□□□ -1.61
LONRF3Q496Y0 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC5.01□□□□□ -1.61
LONRF3Q496Y0 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC5.01□□□□□ -1.61
LONRF3Q496Y0 RN7SL176P-201ENST00000580352 264 ntBASIC5.01□□□□□ -1.61
LONRF3Q496Y0 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC5.01□□□□□ -1.61
LONRF3Q496Y0 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC5.01□□□□□ -1.61
LONRF3Q496Y0 RN7SKP299-201ENST00000606679 301 ntBASIC5.01□□□□□ -1.61
LONRF3Q496Y0 Z98200.1-201ENST00000607298 470 ntBASIC5.01□□□□□ -1.61
LONRF3Q496Y0 AC020634.1-201ENST00000608701 549 ntBASIC5.01□□□□□ -1.61
LONRF3Q496Y0 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.01□□□□□ -1.61
LONRF3Q496Y0 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC5.01□□□□□ -1.61
LONRF3Q496Y0 AL138721.1-201ENST00000616756 179 ntBASIC5.01□□□□□ -1.61
LONRF3Q496Y0 AC006065.6-201ENST00000625201 545 ntBASIC5.01□□□□□ -1.61
LONRF3Q496Y0 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
LONRF3Q496Y0 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC5.01□□□□□ -1.61
LONRF3Q496Y0 ZNF37BP-203ENST00000452306 1352 ntBASIC5.01□□□□□ -1.61
LONRF3Q496Y0 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC5.01□□□□□ -1.61
LONRF3Q496Y0 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5□□□□□ -1.61
LONRF3Q496Y0 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
LONRF3Q496Y0 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5□□□□□ -1.61
LONRF3Q496Y0 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5□□□□□ -1.61
LONRF3Q496Y0 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5□□□□□ -1.61
LONRF3Q496Y0 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5□□□□□ -1.61
LONRF3Q496Y0 SNORA4.1-201ENST00000364263 144 ntBASIC5□□□□□ -1.61
LONRF3Q496Y0 SNORA7.2-201ENST00000364446 145 ntBASIC5□□□□□ -1.61
LONRF3Q496Y0 SNORA70.2-201ENST00000364506 135 ntBASIC5□□□□□ -1.61
LONRF3Q496Y0 RNU6-339P-201ENST00000384310 107 ntBASIC5□□□□□ -1.61
LONRF3Q496Y0 RNU6-1122P-201ENST00000384449 107 ntBASIC5□□□□□ -1.61
LONRF3Q496Y0 MT-TH-201ENST00000387441 69 ntBASIC5□□□□□ -1.61
LONRF3Q496Y0 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5□□□□□ -1.61
LONRF3Q496Y0 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5□□□□□ -1.61
LONRF3Q496Y0 SNORA74C-2-201ENST00000411179 201 ntBASIC5□□□□□ -1.61
LONRF3Q496Y0 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5□□□□□ -1.61
LONRF3Q496Y0 AC068533.2-201ENST00000411872 306 ntBASIC5□□□□□ -1.61
LONRF3Q496Y0 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5□□□□□ -1.61
LONRF3Q496Y0 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC5□□□□□ -1.61
LONRF3Q496Y0 NPM1P49-201ENST00000448027 714 ntBASIC5□□□□□ -1.61
LONRF3Q496Y0 AC108078.3-201ENST00000502633 489 ntBASIC5□□□□□ -1.61
LONRF3Q496Y0 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5□□□□□ -1.61
LONRF3Q496Y0 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5□□□□□ -1.61
LONRF3Q496Y0 ATP1B1P1-201ENST00000509767 915 ntBASIC5□□□□□ -1.61
LONRF3Q496Y0 MTCO3P7-201ENST00000510008 774 ntBASIC5□□□□□ -1.61
LONRF3Q496Y0 AC026412.2-201ENST00000512270 1075 ntBASIC5□□□□□ -1.61
LONRF3Q496Y0 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC5□□□□□ -1.61
LONRF3Q496Y0 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5□□□□□ -1.61
LONRF3Q496Y0 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5□□□□□ -1.61
LONRF3Q496Y0 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC5□□□□□ -1.61
LONRF3Q496Y0 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5□□□□□ -1.61
LONRF3Q496Y0 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC5□□□□□ -1.61
LONRF3Q496Y0 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC5□□□□□ -1.61
LONRF3Q496Y0 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC5□□□□□ -1.61
LONRF3Q496Y0 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5□□□□□ -1.61
LONRF3Q496Y0 ARF4P1-201ENST00000605447 541 ntBASIC5□□□□□ -1.61
LONRF3Q496Y0 AC005962.2-201ENST00000611427 652 ntBASIC5□□□□□ -1.61
LONRF3Q496Y0 AC023043.4-201ENST00000612081 449 ntBASIC5□□□□□ -1.61
LONRF3Q496Y0 AP005019.3-201ENST00000620418 560 ntBASIC5□□□□□ -1.61
LONRF3Q496Y0 AC008443.7-201ENST00000622195 246 ntBASIC5□□□□□ -1.61
LONRF3Q496Y0 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC5□□□□□ -1.61
LONRF3Q496Y0 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC5□□□□□ -1.61
LONRF3Q496Y0 AC055839.1-201ENST00000634467 498 ntBASIC5□□□□□ -1.61
LONRF3Q496Y0 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC5□□□□□ -1.61
LONRF3Q496Y0 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LONRF3Q496Y0 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC5□□□□□ -1.61
LONRF3Q496Y0 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LONRF3Q496Y0 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LONRF3Q496Y0 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
LONRF3Q496Y0 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LONRF3Q496Y0 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LONRF3Q496Y0 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LONRF3Q496Y0 IQCB2P-201ENST00000401788 1633 ntBASIC4.99□□□□□ -1.61
LONRF3Q496Y0 RNA5SP479-201ENST00000364858 117 ntBASIC4.99□□□□□ -1.61
LONRF3Q496Y0 Y_RNA.505-201ENST00000384489 102 ntBASIC4.99□□□□□ -1.61
LONRF3Q496Y0 SNORA26.8-201ENST00000391306 124 ntBASIC4.99□□□□□ -1.61
LONRF3Q496Y0 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.99□□□□□ -1.61
LONRF3Q496Y0 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.99□□□□□ -1.61
LONRF3Q496Y0 AL031779.1-201ENST00000415663 330 ntBASIC4.99□□□□□ -1.61
LONRF3Q496Y0 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.99□□□□□ -1.61
LONRF3Q496Y0 AL139095.3-201ENST00000419672 1203 ntBASIC4.99□□□□□ -1.61
LONRF3Q496Y0 USP9YP28-201ENST00000435142 589 ntBASIC4.99□□□□□ -1.61
LONRF3Q496Y0 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LONRF3Q496Y0 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.99□□□□□ -1.61
LONRF3Q496Y0 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.99□□□□□ -1.61
LONRF3Q496Y0 VN1R32P-201ENST00000452234 905 ntBASIC4.99□□□□□ -1.61
LONRF3Q496Y0 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.99□□□□□ -1.61
LONRF3Q496Y0 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.99□□□□□ -1.61
LONRF3Q496Y0 AC079804.1-201ENST00000461922 436 ntBASIC4.99□□□□□ -1.61
LONRF3Q496Y0 RPS27AP17-201ENST00000463344 455 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 189 ms