Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC1.63□□□□□ -2.15
HSPG2P98160 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC1.63□□□□□ -2.15
HSPG2P98160 MIR4781-201ENST00000585250 76 ntBASIC1.63□□□□□ -2.15
HSPG2P98160 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC1.63□□□□□ -2.15
HSPG2P98160 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
HSPG2P98160 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
HSPG2P98160 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
HSPG2P98160 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
HSPG2P98160 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
HSPG2P98160 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
HSPG2P98160 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
HSPG2P98160 CACYBPP2-201ENST00000453625 678 ntBASIC1.63□□□□□ -2.15
HSPG2P98160 HMGN1P18-201ENST00000457642 277 ntBASIC1.63□□□□□ -2.15
HSPG2P98160 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC1.63□□□□□ -2.15
HSPG2P98160 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC1.63□□□□□ -2.15
HSPG2P98160 AC018630.1-201ENST00000541376 925 ntBASIC1.63□□□□□ -2.15
HSPG2P98160 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.63□□□□□ -2.15
HSPG2P98160 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.63□□□□□ -2.15
HSPG2P98160 AL031985.3-201ENST00000565390 2449 ntBASIC1.63□□□□□ -2.15
HSPG2P98160 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC1.63□□□□□ -2.15
HSPG2P98160 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
HSPG2P98160 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC1.63□□□□□ -2.15
HSPG2P98160 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
HSPG2P98160 MIR30E-201ENST00000362104 92 ntBASIC1.63□□□□□ -2.15
HSPG2P98160 Y_RNA.116-201ENST00000363292 103 ntBASIC1.63□□□□□ -2.15
HSPG2P98160 AC108860.1-201ENST00000484521 383 ntBASIC1.63□□□□□ -2.15
HSPG2P98160 RN7SL636P-201ENST00000497504 294 ntBASIC1.63□□□□□ -2.15
HSPG2P98160 TRAV11-201ENST00000539512 339 ntBASIC1.63□□□□□ -2.15
HSPG2P98160 AC010928.3-201ENST00000587712 541 ntBASIC1.63□□□□□ -2.15
HSPG2P98160 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
HSPG2P98160 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC1.62□□□□□ -2.15
HSPG2P98160 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.62□□□□□ -2.15
HSPG2P98160 AC131280.1-202ENST00000624067 4211 ntBASIC1.62□□□□□ -2.15
HSPG2P98160 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC1.62□□□□□ -2.15
HSPG2P98160 RNA5SP88-201ENST00000365560 109 ntBASIC1.62□□□□□ -2.15
HSPG2P98160 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.62□□□□□ -2.15
HSPG2P98160 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC1.62□□□□□ -2.15
HSPG2P98160 RPL30P9-201ENST00000465586 330 ntBASIC1.62□□□□□ -2.15
HSPG2P98160 AC092045.1-201ENST00000495716 1231 ntBASIC1.62□□□□□ -2.15
HSPG2P98160 AC021146.1-201ENST00000511202 716 ntBASIC1.62□□□□□ -2.15
HSPG2P98160 RN7SKP219-201ENST00000516825 296 ntBASIC1.62□□□□□ -2.15
HSPG2P98160 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.62□□□□□ -2.15
HSPG2P98160 MTND5P28-201ENST00000438005 1594 ntBASIC1.62□□□□□ -2.15
HSPG2P98160 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC1.62□□□□□ -2.15
HSPG2P98160 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
HSPG2P98160 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
HSPG2P98160 SNORD114-1-201ENST00000362705 72 ntBASIC1.62□□□□□ -2.15
HSPG2P98160 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
HSPG2P98160 AL590290.1-201ENST00000405336 380 ntBASIC1.62□□□□□ -2.15
HSPG2P98160 AC009414.1-201ENST00000427200 443 ntBASIC1.62□□□□□ -2.15
HSPG2P98160 AC112220.1-201ENST00000434628 355 ntBASIC1.62□□□□□ -2.15
HSPG2P98160 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.62□□□□□ -2.15
HSPG2P98160 AC007677.1-201ENST00000445757 515 ntBASIC1.62□□□□□ -2.15
HSPG2P98160 AC006539.3-201ENST00000454258 129 ntBASIC1.62□□□□□ -2.15
HSPG2P98160 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
HSPG2P98160 AL122125.1-201ENST00000616999 600 ntBASIC1.62□□□□□ -2.15
HSPG2P98160 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
HSPG2P98160 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC1.62□□□□□ -2.15
HSPG2P98160 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
HSPG2P98160 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
HSPG2P98160 U8.13-201ENST00000390842 128 ntBASIC1.62□□□□□ -2.15
HSPG2P98160 AL135786.1-201ENST00000415892 214 ntBASIC1.62□□□□□ -2.15
HSPG2P98160 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC1.62□□□□□ -2.15
HSPG2P98160 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.62□□□□□ -2.15
HSPG2P98160 GTF2IP23-201ENST00000423746 351 ntBASIC1.62□□□□□ -2.15
HSPG2P98160 Z98742.2-201ENST00000431564 187 ntBASIC1.62□□□□□ -2.15
HSPG2P98160 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC1.62□□□□□ -2.15
HSPG2P98160 ENSA-210ENST00000503241 574 ntTSL 3 BASIC1.62□□□□□ -2.15
HSPG2P98160 PRELID3BP7-201ENST00000503606 469 ntBASIC1.62□□□□□ -2.15
HSPG2P98160 Y_RNA.670-201ENST00000516255 105 ntBASIC1.62□□□□□ -2.15
HSPG2P98160 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC1.62□□□□□ -2.15
HSPG2P98160 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
HSPG2P98160 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
HSPG2P98160 MTND5P6-201ENST00000422338 1798 ntBASIC1.62□□□□□ -2.15
HSPG2P98160 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
HSPG2P98160 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
HSPG2P98160 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
HSPG2P98160 AL024474.1-201ENST00000404655 591 ntBASIC1.61□□□□□ -2.15
HSPG2P98160 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC1.61□□□□□ -2.15
HSPG2P98160 AC245291.1-201ENST00000419501 328 ntBASIC1.61□□□□□ -2.15
HSPG2P98160 FCF1P1-201ENST00000432690 571 ntBASIC1.61□□□□□ -2.15
HSPG2P98160 TAF9P1-201ENST00000445421 515 ntBASIC1.61□□□□□ -2.15
HSPG2P98160 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC1.61□□□□□ -2.15
HSPG2P98160 TAF9P2-201ENST00000454958 515 ntBASIC1.61□□□□□ -2.15
HSPG2P98160 AC068587.2-201ENST00000478386 781 ntBASIC1.61□□□□□ -2.15
HSPG2P98160 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
HSPG2P98160 MTHFD2P4-201ENST00000515074 1025 ntBASIC1.61□□□□□ -2.15
HSPG2P98160 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC1.61□□□□□ -2.15
HSPG2P98160 TRAV37-201ENST00000553906 342 ntBASIC1.61□□□□□ -2.15
HSPG2P98160 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.61□□□□□ -2.15
HSPG2P98160 MIR6845-201ENST00000613182 61 ntBASIC1.61□□□□□ -2.15
HSPG2P98160 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
HSPG2P98160 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC1.61□□□□□ -2.15
HSPG2P98160 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
HSPG2P98160 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC1.61□□□□□ -2.15
HSPG2P98160 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
HSPG2P98160 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
HSPG2P98160 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.61□□□□□ -2.15
HSPG2P98160 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC1.61□□□□□ -2.15
HSPG2P98160 OR2AS1P-201ENST00000427827 319 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms