Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 AL138878.1-201ENST00000405131 347 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.65□□□□□ -1.83
ERVFC1-1P60608 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ERVFC1-1P60608 RPL7P30-201ENST00000420888 709 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 Z74021.1-201ENST00000423610 407 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 EI24P4-201ENST00000423683 1078 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 AC007742.1-201ENST00000425789 329 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.65□□□□□ -1.83
ERVFC1-1P60608 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC3.65□□□□□ -1.83
ERVFC1-1P60608 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
ERVFC1-1P60608 AC010881.1-201ENST00000433830 235 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 AL451139.1-201ENST00000434718 346 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 ELOCP26-201ENST00000436067 329 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 HMGB1P31-201ENST00000437242 427 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 PGBD4P3-201ENST00000440731 581 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 AL662791.1-201ENST00000441992 928 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 OR7E125P-201ENST00000443450 846 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 CEACAMP7-201ENST00000444105 496 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC3.65□□□□□ -1.83
ERVFC1-1P60608 AL354714.3-201ENST00000447284 493 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 MTCO1P27-201ENST00000448269 226 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 Z92846.1-201ENST00000456203 268 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 AC013267.1-201ENST00000458227 267 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 MEMO1P3-201ENST00000459811 302 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.65□□□□□ -1.83
ERVFC1-1P60608 RPS21P4-201ENST00000487122 248 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 AC005912.1-201ENST00000495392 255 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 FCF1P3-201ENST00000496394 590 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 KLRA1P-201ENST00000503499 986 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 AC024558.1-201ENST00000505008 528 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 AC021678.1-201ENST00000505195 936 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 RPS4XP20-201ENST00000505751 772 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
ERVFC1-1P60608 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.65□□□□□ -1.83
ERVFC1-1P60608 NDUFB4P2-201ENST00000509515 391 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 MIR2114-201ENST00000516645 80 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 RNU6-430P-201ENST00000517078 107 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.65□□□□□ -1.83
ERVFC1-1P60608 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC3.65□□□□□ -1.83
ERVFC1-1P60608 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.65□□□□□ -1.83
ERVFC1-1P60608 AP004247.1-201ENST00000531556 1289 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 AC013828.2-201ENST00000532487 235 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 CBX3P7-201ENST00000532876 502 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.65□□□□□ -1.83
ERVFC1-1P60608 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.65□□□□□ -1.83
ERVFC1-1P60608 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.65□□□□□ -1.83
ERVFC1-1P60608 ADI1P3-201ENST00000549509 470 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.65□□□□□ -1.83
ERVFC1-1P60608 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ERVFC1-1P60608 AC012417.1-201ENST00000582307 1039 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 VN1R79P-201ENST00000593540 513 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC3.65□□□□□ -1.83
ERVFC1-1P60608 AL133338.2-201ENST00000604292 736 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 AC112187.2-201ENST00000604345 283 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 AC090578.1-201ENST00000604955 591 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 HMGB1P50-201ENST00000605814 607 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 AC008966.2-201ENST00000606157 453 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 AC091965.4-201ENST00000607691 587 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.65□□□□□ -1.83
ERVFC1-1P60608 AC097468.3-201ENST00000607956 456 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 AC126915.2-201ENST00000610957 190 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 AC025253.1-201ENST00000613623 543 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.65□□□□□ -1.83
ERVFC1-1P60608 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.65□□□□□ -1.83
ERVFC1-1P60608 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC3.65□□□□□ -1.83
ERVFC1-1P60608 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC3.65□□□□□ -1.83
ERVFC1-1P60608 MIR3688-2-201ENST00000636963 87 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 AC099654.14-201ENST00000638599 341 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.65□□□□□ -1.83
ERVFC1-1P60608 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC3.65□□□□□ -1.83
ERVFC1-1P60608 AL049555.1-201ENST00000562834 1933 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ERVFC1-1P60608 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
ERVFC1-1P60608 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.65□□□□□ -1.83
ERVFC1-1P60608 AC018555.1-201ENST00000567548 1980 ntBASIC3.65□□□□□ -1.83
ERVFC1-1P60608 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
ERVFC1-1P60608 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
ERVFC1-1P60608 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
ERVFC1-1P60608 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
ERVFC1-1P60608 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ERVFC1-1P60608 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
ERVFC1-1P60608 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
ERVFC1-1P60608 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
ERVFC1-1P60608 AC022031.1-201ENST00000585985 2593 ntBASIC3.64□□□□□ -1.83
ERVFC1-1P60608 A2MP1-204ENST00000566278 4130 ntBASIC3.64□□□□□ -1.83
ERVFC1-1P60608 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
ERVFC1-1P60608 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.64□□□□□ -1.83
ERVFC1-1P60608 AC009229.4-201ENST00000623854 1947 ntBASIC3.64□□□□□ -1.83
ERVFC1-1P60608 AC025125.1-201ENST00000624743 1922 ntBASIC3.64□□□□□ -1.83
ERVFC1-1P60608 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
ERVFC1-1P60608 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
ERVFC1-1P60608 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC3.64□□□□□ -1.83
ERVFC1-1P60608 MIR92A2-201ENST00000385299 75 ntBASIC3.64□□□□□ -1.83
ERVFC1-1P60608 AL121972.1-201ENST00000402023 252 ntBASIC3.64□□□□□ -1.83
ERVFC1-1P60608 CIR1P3-201ENST00000405137 479 ntBASIC3.64□□□□□ -1.83
ERVFC1-1P60608 MAST4-207ENST00000407621 559 ntTSL 2 BASIC3.64□□□□□ -1.83
ERVFC1-1P60608 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.64□□□□□ -1.83
ERVFC1-1P60608 RNU2-28P-201ENST00000410457 189 ntBASIC3.64□□□□□ -1.83
ERVFC1-1P60608 RPL35AP24-201ENST00000413846 330 ntBASIC3.64□□□□□ -1.83
ERVFC1-1P60608 AL109913.1-201ENST00000421173 514 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms