Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RTP1P59025 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.5□□□□□ -1.53
RTP1P59025 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.5□□□□□ -1.53
RTP1P59025 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
RTP1P59025 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RTP1P59025 AC104260.2-201ENST00000623551 3497 ntBASIC5.5□□□□□ -1.53
RTP1P59025 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
RTP1P59025 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
RTP1P59025 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RTP1P59025 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
RTP1P59025 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.5□□□□□ -1.53
RTP1P59025 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RTP1P59025 RNA5SP447-201ENST00000363749 119 ntBASIC5.5□□□□□ -1.53
RTP1P59025 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.5□□□□□ -1.53
RTP1P59025 RNU6-1227P-201ENST00000383981 107 ntBASIC5.5□□□□□ -1.53
RTP1P59025 RNU6-1151P-201ENST00000384684 107 ntBASIC5.5□□□□□ -1.53
RTP1P59025 SNORD115.1-201ENST00000391109 76 ntBASIC5.5□□□□□ -1.53
RTP1P59025 AL590004.1-201ENST00000405321 300 ntBASIC5.5□□□□□ -1.53
RTP1P59025 CTSL3P-202ENST00000412179 788 ntBASIC5.5□□□□□ -1.53
RTP1P59025 RSU1P3-201ENST00000412878 835 ntBASIC5.5□□□□□ -1.53
RTP1P59025 AC007738.1-201ENST00000413892 348 ntBASIC5.5□□□□□ -1.53
RTP1P59025 AL354751.2-201ENST00000415471 210 ntBASIC5.5□□□□□ -1.53
RTP1P59025 AC023347.2-201ENST00000433994 462 ntBASIC5.5□□□□□ -1.53
RTP1P59025 RPL23AP16-201ENST00000441715 421 ntBASIC5.5□□□□□ -1.53
RTP1P59025 CALM1P1-201ENST00000442082 433 ntBASIC5.5□□□□□ -1.53
RTP1P59025 AC132479.1-201ENST00000449160 144 ntBASIC5.5□□□□□ -1.53
RTP1P59025 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC5.5□□□□□ -1.53
RTP1P59025 AC099563.1-201ENST00000456086 418 ntBASIC5.5□□□□□ -1.53
RTP1P59025 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
RTP1P59025 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC5.5□□□□□ -1.53
RTP1P59025 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.5□□□□□ -1.53
RTP1P59025 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.5□□□□□ -1.53
RTP1P59025 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.5□□□□□ -1.53
RTP1P59025 FGF7P4-201ENST00000509595 295 ntBASIC5.5□□□□□ -1.53
RTP1P59025 RNA5SP464-201ENST00000516251 108 ntBASIC5.5□□□□□ -1.53
RTP1P59025 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.5□□□□□ -1.53
RTP1P59025 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC5.5□□□□□ -1.53
RTP1P59025 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC5.5□□□□□ -1.53
RTP1P59025 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC5.5□□□□□ -1.53
RTP1P59025 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC5.5□□□□□ -1.53
RTP1P59025 AC107954.1-201ENST00000565906 727 ntBASIC5.5□□□□□ -1.53
RTP1P59025 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC5.5□□□□□ -1.53
RTP1P59025 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.5□□□□□ -1.53
RTP1P59025 AL050343.2-201ENST00000607338 280 ntBASIC5.5□□□□□ -1.53
RTP1P59025 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC5.5□□□□□ -1.53
RTP1P59025 AL161637.1-201ENST00000622380 412 ntBASIC5.5□□□□□ -1.53
RTP1P59025 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.5□□□□□ -1.53
RTP1P59025 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
RTP1P59025 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
RTP1P59025 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RTP1P59025 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
RTP1P59025 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
RTP1P59025 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RTP1P59025 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RTP1P59025 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RTP1P59025 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.49□□□□□ -1.53
RTP1P59025 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
RTP1P59025 GVINP1-202ENST00000531871 7271 ntBASIC5.49□□□□□ -1.53
RTP1P59025 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
RTP1P59025 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.49□□□□□ -1.53
RTP1P59025 RNU6-769P-201ENST00000384407 104 ntBASIC5.49□□□□□ -1.53
RTP1P59025 MIR137-201ENST00000385223 102 ntBASIC5.49□□□□□ -1.53
RTP1P59025 SNORA57.1-201ENST00000391227 145 ntBASIC5.49□□□□□ -1.53
RTP1P59025 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
RTP1P59025 AL121972.1-201ENST00000402023 252 ntBASIC5.49□□□□□ -1.53
RTP1P59025 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RTP1P59025 MIR320C1-201ENST00000408566 88 ntBASIC5.49□□□□□ -1.53
RTP1P59025 RNU6-908P-201ENST00000410160 94 ntBASIC5.49□□□□□ -1.53
RTP1P59025 RNU2-6P-201ENST00000411404 190 ntBASIC5.49□□□□□ -1.53
RTP1P59025 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.49□□□□□ -1.53
RTP1P59025 BTF3L4P3-201ENST00000418879 476 ntBASIC5.49□□□□□ -1.53
RTP1P59025 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC5.49□□□□□ -1.53
RTP1P59025 SNRPEP10-201ENST00000420249 274 ntBASIC5.49□□□□□ -1.53
RTP1P59025 AL353193.1-201ENST00000421444 268 ntBASIC5.49□□□□□ -1.53
RTP1P59025 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC5.49□□□□□ -1.53
RTP1P59025 AL589872.1-201ENST00000426602 288 ntBASIC5.49□□□□□ -1.53
RTP1P59025 DYNLL1P7-201ENST00000429273 258 ntBASIC5.49□□□□□ -1.53
RTP1P59025 HMGB3P10-201ENST00000434734 572 ntBASIC5.49□□□□□ -1.53
RTP1P59025 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.49□□□□□ -1.53
RTP1P59025 AL691482.1-201ENST00000453255 87 ntBASIC5.49□□□□□ -1.53
RTP1P59025 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC5.49□□□□□ -1.53
RTP1P59025 RPL23AP56-201ENST00000460778 453 ntBASIC5.49□□□□□ -1.53
RTP1P59025 AC006390.1-201ENST00000508068 283 ntBASIC5.49□□□□□ -1.53
RTP1P59025 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC5.49□□□□□ -1.53
RTP1P59025 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.49□□□□□ -1.53
RTP1P59025 AC093840.1-201ENST00000511599 336 ntBASIC5.49□□□□□ -1.53
RTP1P59025 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.49□□□□□ -1.53
RTP1P59025 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC5.49□□□□□ -1.53
RTP1P59025 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.49□□□□□ -1.53
RTP1P59025 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.49□□□□□ -1.53
RTP1P59025 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC5.49□□□□□ -1.53
RTP1P59025 AC090502.2-201ENST00000549267 280 ntBASIC5.49□□□□□ -1.53
RTP1P59025 AC093591.2-201ENST00000565254 3843 ntBASIC5.49□□□□□ -1.53
RTP1P59025 AC023575.1-201ENST00000580510 358 ntBASIC5.49□□□□□ -1.53
RTP1P59025 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.49□□□□□ -1.53
RTP1P59025 AC010928.3-201ENST00000587712 541 ntBASIC5.49□□□□□ -1.53
RTP1P59025 CKS1BP3-201ENST00000600888 237 ntBASIC5.49□□□□□ -1.53
RTP1P59025 AL162413.1-201ENST00000603198 110 ntBASIC5.49□□□□□ -1.53
RTP1P59025 AC090948.2-201ENST00000607363 564 ntBASIC5.49□□□□□ -1.53
RTP1P59025 AC093788.1-201ENST00000609356 927 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms