Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.16□□□□□ -1.9
VSX2P58304 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.16□□□□□ -1.9
VSX2P58304 YWHAQP7-201ENST00000603536 658 ntBASIC3.16□□□□□ -1.9
VSX2P58304 KATNBL1P5-201ENST00000605015 517 ntBASIC3.16□□□□□ -1.9
VSX2P58304 STMN1P1-201ENST00000617809 440 ntBASIC3.16□□□□□ -1.9
VSX2P58304 FRG1HP-204ENST00000617940 757 ntBASIC3.16□□□□□ -1.9
VSX2P58304 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.16□□□□□ -1.9
VSX2P58304 AC006065.5-201ENST00000623427 349 ntBASIC3.16□□□□□ -1.9
VSX2P58304 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.16□□□□□ -1.9
VSX2P58304 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
VSX2P58304 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
VSX2P58304 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
VSX2P58304 AC004972.1-201ENST00000623934 2209 ntBASIC3.16□□□□□ -1.9
VSX2P58304 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
VSX2P58304 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
VSX2P58304 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
VSX2P58304 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
VSX2P58304 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
VSX2P58304 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
VSX2P58304 RNU6-650P-201ENST00000365658 111 ntBASIC3.15□□□□□ -1.91
VSX2P58304 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
VSX2P58304 SNORA70E-201ENST00000384492 135 ntBASIC3.15□□□□□ -1.91
VSX2P58304 RNU4-27P-201ENST00000410889 139 ntBASIC3.15□□□□□ -1.91
VSX2P58304 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
VSX2P58304 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.15□□□□□ -1.91
VSX2P58304 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
VSX2P58304 AL512661.1-201ENST00000434586 1253 ntBASIC3.15□□□□□ -1.91
VSX2P58304 AC091862.1-201ENST00000438016 1100 ntBASIC3.15□□□□□ -1.91
VSX2P58304 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.15□□□□□ -1.91
VSX2P58304 RAB11AP1-201ENST00000442978 646 ntBASIC3.15□□□□□ -1.91
VSX2P58304 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.15□□□□□ -1.91
VSX2P58304 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.15□□□□□ -1.91
VSX2P58304 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.15□□□□□ -1.91
VSX2P58304 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.15□□□□□ -1.91
VSX2P58304 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.15□□□□□ -1.91
VSX2P58304 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.15□□□□□ -1.91
VSX2P58304 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.15□□□□□ -1.91
VSX2P58304 AC005351.1-201ENST00000511152 786 ntBASIC3.15□□□□□ -1.91
VSX2P58304 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.15□□□□□ -1.91
VSX2P58304 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.15□□□□□ -1.91
VSX2P58304 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.15□□□□□ -1.91
VSX2P58304 HIGD1AP1-201ENST00000550979 275 ntBASIC3.15□□□□□ -1.91
VSX2P58304 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.15□□□□□ -1.91
VSX2P58304 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.15□□□□□ -1.91
VSX2P58304 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.15□□□□□ -1.91
VSX2P58304 MIR3200-201ENST00000580767 85 ntBASIC3.15□□□□□ -1.91
VSX2P58304 AC008507.1-201ENST00000587506 734 ntBASIC3.15□□□□□ -1.91
VSX2P58304 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.15□□□□□ -1.91
VSX2P58304 CKS1BP3-201ENST00000600888 237 ntBASIC3.15□□□□□ -1.91
VSX2P58304 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.15□□□□□ -1.91
VSX2P58304 AL606834.2-201ENST00000602954 668 ntBASIC3.15□□□□□ -1.91
VSX2P58304 LLPHP1-201ENST00000603571 367 ntBASIC3.15□□□□□ -1.91
VSX2P58304 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.15□□□□□ -1.91
VSX2P58304 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.15□□□□□ -1.91
VSX2P58304 AC107308.1-201ENST00000615897 301 ntBASIC3.15□□□□□ -1.91
VSX2P58304 RMST_10.1-201ENST00000616309 154 ntBASIC3.15□□□□□ -1.91
VSX2P58304 AC073569.3-201ENST00000619055 682 ntBASIC3.15□□□□□ -1.91
VSX2P58304 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.15□□□□□ -1.91
VSX2P58304 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.15□□□□□ -1.91
VSX2P58304 AC024341.1-201ENST00000526444 1552 ntBASIC3.15□□□□□ -1.91
VSX2P58304 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
VSX2P58304 MFSD8-213ENST00000641134 1327 ntBASIC3.15□□□□□ -1.91
VSX2P58304 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.14□□□□□ -1.91
VSX2P58304 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
VSX2P58304 MTCO1P18-201ENST00000455518 1419 ntBASIC3.14□□□□□ -1.91
VSX2P58304 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.14□□□□□ -1.91
VSX2P58304 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
VSX2P58304 RNU1-70P-201ENST00000362618 164 ntBASIC3.14□□□□□ -1.91
VSX2P58304 RNU6-792P-201ENST00000363490 107 ntBASIC3.14□□□□□ -1.91
VSX2P58304 SNORA48.8-201ENST00000391324 134 ntBASIC3.14□□□□□ -1.91
VSX2P58304 DNAJC19P6-201ENST00000401853 280 ntBASIC3.14□□□□□ -1.91
VSX2P58304 AC073310.1-201ENST00000423226 1033 ntBASIC3.14□□□□□ -1.91
VSX2P58304 FAM204CP-201ENST00000424489 642 ntBASIC3.14□□□□□ -1.91
VSX2P58304 ETF1P3-201ENST00000430422 1160 ntBASIC3.14□□□□□ -1.91
VSX2P58304 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.14□□□□□ -1.91
VSX2P58304 HMGB1P45-201ENST00000435986 653 ntBASIC3.14□□□□□ -1.91
VSX2P58304 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.14□□□□□ -1.91
VSX2P58304 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.14□□□□□ -1.91
VSX2P58304 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
VSX2P58304 RPL23AP15-201ENST00000450202 459 ntBASIC3.14□□□□□ -1.91
VSX2P58304 PTGES3P5-201ENST00000455109 434 ntBASIC3.14□□□□□ -1.91
VSX2P58304 AC008280.2-201ENST00000455473 307 ntBASIC3.14□□□□□ -1.91
VSX2P58304 RPS27P29-201ENST00000463110 252 ntBASIC3.14□□□□□ -1.91
VSX2P58304 RN7SL807P-201ENST00000470923 297 ntBASIC3.14□□□□□ -1.91
VSX2P58304 RPL7L1P13-201ENST00000511702 739 ntBASIC3.14□□□□□ -1.91
VSX2P58304 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.14□□□□□ -1.91
VSX2P58304 AC016065.2-201ENST00000514530 444 ntBASIC3.14□□□□□ -1.91
VSX2P58304 MIR2276-201ENST00000516886 89 ntBASIC3.14□□□□□ -1.91
VSX2P58304 RN7SKP289-201ENST00000517244 295 ntBASIC3.14□□□□□ -1.91
VSX2P58304 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.14□□□□□ -1.91
VSX2P58304 AP001636.2-201ENST00000525517 696 ntBASIC3.14□□□□□ -1.91
VSX2P58304 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.14□□□□□ -1.91
VSX2P58304 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.14□□□□□ -1.91
VSX2P58304 AC010198.2-201ENST00000550612 259 ntBASIC3.14□□□□□ -1.91
VSX2P58304 SNRPGP1-201ENST00000553864 222 ntBASIC3.14□□□□□ -1.91
VSX2P58304 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.14□□□□□ -1.91
VSX2P58304 ZNF415P1-201ENST00000582279 1166 ntBASIC3.14□□□□□ -1.91
VSX2P58304 AC009948.4-201ENST00000604692 675 ntBASIC3.14□□□□□ -1.91
VSX2P58304 AC021851.1-201ENST00000608537 1082 ntBASIC3.14□□□□□ -1.91
VSX2P58304 uc_338.1-201ENST00000612113 180 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms