Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 LSM1P1-201ENST00000438629 273 ntBASIC4□□□□□ -1.77
CDH12P55289 AC114495.1-201ENST00000441274 436 ntBASIC4□□□□□ -1.77
CDH12P55289 AL357520.1-201ENST00000441557 453 ntBASIC4□□□□□ -1.77
CDH12P55289 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4□□□□□ -1.77
CDH12P55289 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4□□□□□ -1.77
CDH12P55289 FGF7P3-201ENST00000454645 303 ntBASIC4□□□□□ -1.77
CDH12P55289 RPL35AP15-201ENST00000468042 339 ntBASIC4□□□□□ -1.77
CDH12P55289 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4□□□□□ -1.77
CDH12P55289 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4□□□□□ -1.77
CDH12P55289 AC093809.1-201ENST00000509155 340 ntBASIC4□□□□□ -1.77
CDH12P55289 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4□□□□□ -1.77
CDH12P55289 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4□□□□□ -1.77
CDH12P55289 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4□□□□□ -1.77
CDH12P55289 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4□□□□□ -1.77
CDH12P55289 AL139174.1-201ENST00000531489 886 ntBASIC4□□□□□ -1.77
CDH12P55289 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4□□□□□ -1.77
CDH12P55289 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4□□□□□ -1.77
CDH12P55289 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4□□□□□ -1.77
CDH12P55289 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4□□□□□ -1.77
CDH12P55289 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4□□□□□ -1.77
CDH12P55289 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4□□□□□ -1.77
CDH12P55289 DEFB131E-202ENST00000602581 683 ntBASIC4□□□□□ -1.77
CDH12P55289 AC080078.2-201ENST00000603766 501 ntBASIC4□□□□□ -1.77
CDH12P55289 AC097468.3-201ENST00000607956 456 ntBASIC4□□□□□ -1.77
CDH12P55289 AL049539.1-201ENST00000611964 459 ntBASIC4□□□□□ -1.77
CDH12P55289 AC025588.4-201ENST00000615802 908 ntBASIC4□□□□□ -1.77
CDH12P55289 AC068792.1-201ENST00000621354 417 ntBASIC4□□□□□ -1.77
CDH12P55289 BMS1P21-201ENST00000634565 365 ntBASIC4□□□□□ -1.77
CDH12P55289 AL022578.1-201ENST00000439330 1433 ntBASIC4□□□□□ -1.77
CDH12P55289 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
CDH12P55289 AC114546.3-201ENST00000623582 1734 ntBASIC4□□□□□ -1.77
CDH12P55289 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4□□□□□ -1.77
CDH12P55289 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
CDH12P55289 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
CDH12P55289 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4□□□□□ -1.77
CDH12P55289 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
CDH12P55289 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDH12P55289 ASNSP1-201ENST00000518311 1939 ntBASIC3.99□□□□□ -1.77
CDH12P55289 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.99□□□□□ -1.77
CDH12P55289 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.99□□□□□ -1.77
CDH12P55289 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDH12P55289 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CDH12P55289 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.99□□□□□ -1.77
CDH12P55289 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CDH12P55289 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDH12P55289 RNU5F-7P-201ENST00000363696 115 ntBASIC3.99□□□□□ -1.77
CDH12P55289 RNU1-130P-201ENST00000363930 160 ntBASIC3.99□□□□□ -1.77
CDH12P55289 RNU6-289P-201ENST00000364093 107 ntBASIC3.99□□□□□ -1.77
CDH12P55289 AC025750.1-201ENST00000399891 379 ntBASIC3.99□□□□□ -1.77
CDH12P55289 AC097374.1-203ENST00000400783 485 ntBASIC3.99□□□□□ -1.77
CDH12P55289 RNU2-16P-201ENST00000410712 136 ntBASIC3.99□□□□□ -1.77
CDH12P55289 TPMTP2-201ENST00000414372 726 ntBASIC3.99□□□□□ -1.77
CDH12P55289 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.99□□□□□ -1.77
CDH12P55289 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.99□□□□□ -1.77
CDH12P55289 RPS27AP14-201ENST00000422868 454 ntBASIC3.99□□□□□ -1.77
CDH12P55289 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.99□□□□□ -1.77
CDH12P55289 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.99□□□□□ -1.77
CDH12P55289 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.99□□□□□ -1.77
CDH12P55289 MTND5P14-201ENST00000441481 1267 ntBASIC3.99□□□□□ -1.77
CDH12P55289 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.99□□□□□ -1.77
CDH12P55289 TPT1P7-201ENST00000458300 517 ntBASIC3.99□□□□□ -1.77
CDH12P55289 RPL35AP28-201ENST00000459730 331 ntBASIC3.99□□□□□ -1.77
CDH12P55289 AC053481.1-201ENST00000467217 306 ntBASIC3.99□□□□□ -1.77
CDH12P55289 RN7SL585P-201ENST00000470538 280 ntBASIC3.99□□□□□ -1.77
CDH12P55289 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CDH12P55289 AP000797.1-201ENST00000478870 387 ntBASIC3.99□□□□□ -1.77
CDH12P55289 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.99□□□□□ -1.77
CDH12P55289 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.99□□□□□ -1.77
CDH12P55289 RN7SL812P-201ENST00000493791 279 ntBASIC3.99□□□□□ -1.77
CDH12P55289 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.99□□□□□ -1.77
CDH12P55289 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.99□□□□□ -1.77
CDH12P55289 PGBD4P4-201ENST00000509673 613 ntBASIC3.99□□□□□ -1.77
CDH12P55289 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.99□□□□□ -1.77
CDH12P55289 MTND5P4-201ENST00000514978 288 ntBASIC3.99□□□□□ -1.77
CDH12P55289 AC013828.2-201ENST00000532487 235 ntBASIC3.99□□□□□ -1.77
CDH12P55289 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CDH12P55289 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.99□□□□□ -1.77
CDH12P55289 ZNF415P1-201ENST00000582279 1166 ntBASIC3.99□□□□□ -1.77
CDH12P55289 AC011477.5-201ENST00000586571 259 ntBASIC3.99□□□□□ -1.77
CDH12P55289 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC3.99□□□□□ -1.77
CDH12P55289 AC083760.1-201ENST00000589621 670 ntBASIC3.99□□□□□ -1.77
CDH12P55289 AC087683.1-201ENST00000591187 441 ntBASIC3.99□□□□□ -1.77
CDH12P55289 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CDH12P55289 AC012603.1-201ENST00000606424 528 ntBASIC3.99□□□□□ -1.77
CDH12P55289 AC090948.2-201ENST00000607363 564 ntBASIC3.99□□□□□ -1.77
CDH12P55289 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.99□□□□□ -1.77
CDH12P55289 AC005332.10-201ENST00000612725 619 ntBASIC3.99□□□□□ -1.77
CDH12P55289 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
CDH12P55289 AC000123.2-201ENST00000623124 461 ntBASIC3.99□□□□□ -1.77
CDH12P55289 AC067931.1-201ENST00000624190 671 ntBASIC3.99□□□□□ -1.77
CDH12P55289 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.99□□□□□ -1.77
CDH12P55289 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CDH12P55289 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
CDH12P55289 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.99□□□□□ -1.77
CDH12P55289 MTND4P26-201ENST00000415971 1359 ntBASIC3.99□□□□□ -1.77
CDH12P55289 AC068254.2-201ENST00000623938 3577 ntBASIC3.99□□□□□ -1.77
CDH12P55289 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDH12P55289 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.99□□□□□ -1.77
CDH12P55289 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CDH12P55289 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms