Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDH11P55287 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDH11P55287 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.72□□□□□ -1.81
CDH11P55287 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDH11P55287 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDH11P55287 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.72□□□□□ -1.81
CDH11P55287 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CDH11P55287 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDH11P55287 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CDH11P55287 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.72□□□□□ -1.81
CDH11P55287 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDH11P55287 RNU6-1226P-201ENST00000384317 107 ntBASIC3.72□□□□□ -1.81
CDH11P55287 SNORA57.1-201ENST00000391227 145 ntBASIC3.72□□□□□ -1.81
CDH11P55287 MIR1284-201ENST00000408337 120 ntBASIC3.72□□□□□ -1.81
CDH11P55287 RNA5SP36-201ENST00000410197 133 ntBASIC3.72□□□□□ -1.81
CDH11P55287 RNU2-28P-201ENST00000410457 189 ntBASIC3.72□□□□□ -1.81
CDH11P55287 RN7SKP56-201ENST00000410513 331 ntBASIC3.72□□□□□ -1.81
CDH11P55287 RNU6-628P-201ENST00000410675 107 ntBASIC3.72□□□□□ -1.81
CDH11P55287 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.72□□□□□ -1.81
CDH11P55287 MTND4P20-201ENST00000424125 869 ntBASIC3.72□□□□□ -1.81
CDH11P55287 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.72□□□□□ -1.81
CDH11P55287 AC096638.2-201ENST00000434965 711 ntBASIC3.72□□□□□ -1.81
CDH11P55287 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CDH11P55287 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CDH11P55287 RPL23AP46-201ENST00000438548 490 ntBASIC3.72□□□□□ -1.81
CDH11P55287 MTCYBP34-201ENST00000439552 670 ntBASIC3.72□□□□□ -1.81
CDH11P55287 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.72□□□□□ -1.81
CDH11P55287 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.72□□□□□ -1.81
CDH11P55287 RNU7-125P-201ENST00000458760 62 ntBASIC3.72□□□□□ -1.81
CDH11P55287 RPS7P7-201ENST00000463499 571 ntBASIC3.72□□□□□ -1.81
CDH11P55287 LINC00888-204ENST00000487386 421 ntBASIC3.72□□□□□ -1.81
CDH11P55287 AC092045.1-201ENST00000495716 1231 ntBASIC3.72□□□□□ -1.81
CDH11P55287 RPL5P23-201ENST00000496040 868 ntBASIC3.72□□□□□ -1.81
CDH11P55287 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.72□□□□□ -1.81
CDH11P55287 AC020593.1-201ENST00000507399 299 ntBASIC3.72□□□□□ -1.81
CDH11P55287 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.72□□□□□ -1.81
CDH11P55287 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.72□□□□□ -1.81
CDH11P55287 RNA5SP49-201ENST00000516450 115 ntBASIC3.72□□□□□ -1.81
CDH11P55287 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.72□□□□□ -1.81
CDH11P55287 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.72□□□□□ -1.81
CDH11P55287 AC091515.1-201ENST00000548110 679 ntBASIC3.72□□□□□ -1.81
CDH11P55287 AC025884.1-201ENST00000556034 378 ntBASIC3.72□□□□□ -1.81
CDH11P55287 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.72□□□□□ -1.81
CDH11P55287 MIR4504-201ENST00000577413 92 ntBASIC3.72□□□□□ -1.81
CDH11P55287 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.72□□□□□ -1.81
CDH11P55287 VN1R85P-201ENST00000601587 426 ntBASIC3.72□□□□□ -1.81
CDH11P55287 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CDH11P55287 AC067959.1-201ENST00000604334 379 ntBASIC3.72□□□□□ -1.81
CDH11P55287 AL591034.3-201ENST00000605511 685 ntBASIC3.72□□□□□ -1.81
CDH11P55287 AL136981.2-201ENST00000617319 734 ntBASIC3.72□□□□□ -1.81
CDH11P55287 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.72□□□□□ -1.81
CDH11P55287 MIR8059-201ENST00000620427 81 ntBASIC3.72□□□□□ -1.81
CDH11P55287 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.72□□□□□ -1.81
CDH11P55287 LINC00561-201ENST00000565815 2738 ntBASIC3.72□□□□□ -1.81
CDH11P55287 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.72□□□□□ -1.81
CDH11P55287 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDH11P55287 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CDH11P55287 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
CDH11P55287 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CDH11P55287 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
CDH11P55287 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDH11P55287 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
CDH11P55287 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDH11P55287 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.81
CDH11P55287 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
CDH11P55287 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
CDH11P55287 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.71□□□□□ -1.82
CDH11P55287 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CDH11P55287 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
CDH11P55287 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CDH11P55287 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CDH11P55287 RNU1-85P-201ENST00000364127 164 ntBASIC3.71□□□□□ -1.82
CDH11P55287 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CDH11P55287 SNORD116-2-201ENST00000384274 95 ntBASIC3.71□□□□□ -1.82
CDH11P55287 RNU1-89P-201ENST00000384592 164 ntBASIC3.71□□□□□ -1.82
CDH11P55287 SNORD116-6-201ENST00000384711 96 ntBASIC3.71□□□□□ -1.82
CDH11P55287 AL138878.1-201ENST00000405131 347 ntBASIC3.71□□□□□ -1.82
CDH11P55287 RNA5SP317-201ENST00000410176 116 ntBASIC3.71□□□□□ -1.82
CDH11P55287 RNA5SP239-201ENST00000410218 129 ntBASIC3.71□□□□□ -1.82
CDH11P55287 RNA5SP311-201ENST00000411290 116 ntBASIC3.71□□□□□ -1.82
CDH11P55287 AL133384.1-201ENST00000412744 351 ntBASIC3.71□□□□□ -1.82
CDH11P55287 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.71□□□□□ -1.82
CDH11P55287 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.71□□□□□ -1.82
CDH11P55287 AL022400.1-201ENST00000423946 935 ntBASIC3.71□□□□□ -1.82
CDH11P55287 AC096632.1-201ENST00000427395 310 ntBASIC3.71□□□□□ -1.82
CDH11P55287 NPM1P34-201ENST00000428821 893 ntBASIC3.71□□□□□ -1.82
CDH11P55287 BTF3P10-201ENST00000433415 495 ntBASIC3.71□□□□□ -1.82
CDH11P55287 AF228730.2-201ENST00000438784 848 ntBASIC3.71□□□□□ -1.82
CDH11P55287 RPL23AP16-201ENST00000441715 421 ntBASIC3.71□□□□□ -1.82
CDH11P55287 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH11P55287 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH11P55287 RPL26P28-201ENST00000451325 435 ntBASIC3.71□□□□□ -1.82
CDH11P55287 AC104073.1-201ENST00000451988 151 ntBASIC3.71□□□□□ -1.82
CDH11P55287 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH11P55287 RPL37P6-202ENST00000464216 403 ntBASIC3.71□□□□□ -1.82
CDH11P55287 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH11P55287 MTCYBP17-201ENST00000503579 789 ntBASIC3.71□□□□□ -1.82
CDH11P55287 AC006499.2-201ENST00000513470 337 ntBASIC3.71□□□□□ -1.82
CDH11P55287 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.71□□□□□ -1.82
CDH11P55287 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 166.9 ms