Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 RSL24D1P11-201ENST00000591045 491 ntBASIC4.61□□□□□ -1.67
COPAP53621 AC119751.7-201ENST00000600494 245 ntBASIC4.61□□□□□ -1.67
COPAP53621 YWHAQP7-201ENST00000603536 658 ntBASIC4.61□□□□□ -1.67
COPAP53621 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.61□□□□□ -1.67
COPAP53621 AL713922.2-201ENST00000619384 716 ntBASIC4.61□□□□□ -1.67
COPAP53621 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
COPAP53621 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.61□□□□□ -1.67
COPAP53621 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
COPAP53621 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
COPAP53621 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.61□□□□□ -1.67
COPAP53621 CR383658.2-201ENST00000547576 1525 ntBASIC4.61□□□□□ -1.67
COPAP53621 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
COPAP53621 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
COPAP53621 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.61□□□□□ -1.67
COPAP53621 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.61□□□□□ -1.67
COPAP53621 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.61□□□□□ -1.67
COPAP53621 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
COPAP53621 NOL8P1-201ENST00000508336 3529 ntBASIC4.6□□□□□ -1.67
COPAP53621 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
COPAP53621 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
COPAP53621 AL136164.3-201ENST00000624429 3978 ntBASIC4.6□□□□□ -1.67
COPAP53621 RNU6-433P-201ENST00000363216 104 ntBASIC4.6□□□□□ -1.67
COPAP53621 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
COPAP53621 SNORA70E-201ENST00000384492 135 ntBASIC4.6□□□□□ -1.67
COPAP53621 HMGB1P17-201ENST00000403495 628 ntBASIC4.6□□□□□ -1.67
COPAP53621 VN1R8P-201ENST00000407739 893 ntBASIC4.6□□□□□ -1.67
COPAP53621 TMSB10P2-201ENST00000416049 131 ntBASIC4.6□□□□□ -1.67
COPAP53621 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.6□□□□□ -1.67
COPAP53621 RPL23AP74-201ENST00000437246 471 ntBASIC4.6□□□□□ -1.67
COPAP53621 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.6□□□□□ -1.67
COPAP53621 AL831737.1-201ENST00000441288 271 ntBASIC4.6□□□□□ -1.67
COPAP53621 AP000936.2-201ENST00000447151 681 ntBASIC4.6□□□□□ -1.67
COPAP53621 AC009963.2-201ENST00000453431 138 ntBASIC4.6□□□□□ -1.67
COPAP53621 ISCUP1-201ENST00000454451 448 ntBASIC4.6□□□□□ -1.67
COPAP53621 FGF7P3-201ENST00000454645 303 ntBASIC4.6□□□□□ -1.67
COPAP53621 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.6□□□□□ -1.67
COPAP53621 HMGB3P30-201ENST00000457863 606 ntBASIC4.6□□□□□ -1.67
COPAP53621 RPL30P9-201ENST00000465586 330 ntBASIC4.6□□□□□ -1.67
COPAP53621 PLGLA-201ENST00000465668 449 ntBASIC4.6□□□□□ -1.67
COPAP53621 AC012158.1-204ENST00000483430 465 ntBASIC4.6□□□□□ -1.67
COPAP53621 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.6□□□□□ -1.67
COPAP53621 AC093767.1-201ENST00000504523 156 ntBASIC4.6□□□□□ -1.67
COPAP53621 AC006499.5-201ENST00000505037 514 ntBASIC4.6□□□□□ -1.67
COPAP53621 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.6□□□□□ -1.67
COPAP53621 VWA8P1-201ENST00000510889 176 ntBASIC4.6□□□□□ -1.67
COPAP53621 FTH1P9-201ENST00000513251 355 ntBASIC4.6□□□□□ -1.67
COPAP53621 MTND5P4-201ENST00000514978 288 ntBASIC4.6□□□□□ -1.67
COPAP53621 RN7SKP21-201ENST00000516503 220 ntBASIC4.6□□□□□ -1.67
COPAP53621 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.6□□□□□ -1.67
COPAP53621 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.6□□□□□ -1.67
COPAP53621 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.6□□□□□ -1.67
COPAP53621 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.6□□□□□ -1.67
COPAP53621 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.6□□□□□ -1.67
COPAP53621 AC100770.1-201ENST00000532310 322 ntBASIC4.6□□□□□ -1.67
COPAP53621 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.6□□□□□ -1.67
COPAP53621 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.6□□□□□ -1.67
COPAP53621 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.6□□□□□ -1.67
COPAP53621 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.6□□□□□ -1.67
COPAP53621 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.6□□□□□ -1.67
COPAP53621 AC012213.3-201ENST00000577199 777 ntBASIC4.6□□□□□ -1.67
COPAP53621 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.6□□□□□ -1.67
COPAP53621 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.6□□□□□ -1.67
COPAP53621 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.6□□□□□ -1.67
COPAP53621 MIR3939-201ENST00000582614 106 ntBASIC4.6□□□□□ -1.67
COPAP53621 MIR3138-201ENST00000585238 82 ntBASIC4.6□□□□□ -1.67
COPAP53621 AC008507.1-201ENST00000587506 734 ntBASIC4.6□□□□□ -1.67
COPAP53621 RPL7P50-201ENST00000600588 727 ntBASIC4.6□□□□□ -1.67
COPAP53621 AC025165.5-201ENST00000602802 578 ntBASIC4.6□□□□□ -1.67
COPAP53621 AL031775.1-201ENST00000607014 887 ntBASIC4.6□□□□□ -1.67
COPAP53621 AL513477.2-201ENST00000607858 568 ntBASIC4.6□□□□□ -1.67
COPAP53621 AC107214.2-201ENST00000608204 634 ntBASIC4.6□□□□□ -1.67
COPAP53621 AL391497.1-201ENST00000608671 547 ntBASIC4.6□□□□□ -1.67
COPAP53621 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.6□□□□□ -1.67
COPAP53621 AC012360.2-201ENST00000609349 391 ntBASIC4.6□□□□□ -1.67
COPAP53621 AC090116.1-201ENST00000615679 446 ntBASIC4.6□□□□□ -1.67
COPAP53621 SNX18P1Y-201ENST00000616231 511 ntBASIC4.6□□□□□ -1.67
COPAP53621 AC009237.17-201ENST00000618111 748 ntBASIC4.6□□□□□ -1.67
COPAP53621 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.6□□□□□ -1.67
COPAP53621 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
COPAP53621 DCAF13P1-201ENST00000495256 1330 ntBASIC4.6□□□□□ -1.67
COPAP53621 AC095050.2-201ENST00000510748 1458 ntBASIC4.6□□□□□ -1.67
COPAP53621 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
COPAP53621 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
COPAP53621 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.59□□□□□ -1.67
COPAP53621 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
COPAP53621 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.67
COPAP53621 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
COPAP53621 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
COPAP53621 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
COPAP53621 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
COPAP53621 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
COPAP53621 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
COPAP53621 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
COPAP53621 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
COPAP53621 U3.4-201ENST00000363352 213 ntBASIC4.59□□□□□ -1.67
COPAP53621 RNA5SP479-201ENST00000364858 117 ntBASIC4.59□□□□□ -1.67
COPAP53621 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.59□□□□□ -1.67
COPAP53621 Y_RNA.553-201ENST00000384670 102 ntBASIC4.59□□□□□ -1.67
COPAP53621 OR6C69P-201ENST00000394268 893 ntBASIC4.59□□□□□ -1.67
COPAP53621 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms