Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC069218.2-201ENST00000411665 344 ntBASIC3.82□□□□□ -1.8
PDX1P52945 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.82□□□□□ -1.8
PDX1P52945 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.82□□□□□ -1.8
PDX1P52945 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.82□□□□□ -1.8
PDX1P52945 HIGD1AP4-201ENST00000430194 280 ntBASIC3.82□□□□□ -1.8
PDX1P52945 CETN4P-201ENST00000432407 469 ntBASIC3.82□□□□□ -1.8
PDX1P52945 MTND3P1-201ENST00000441336 220 ntBASIC3.82□□□□□ -1.8
PDX1P52945 AL133477.1-201ENST00000457472 514 ntBASIC3.82□□□□□ -1.8
PDX1P52945 RPL7P15-201ENST00000461190 712 ntBASIC3.82□□□□□ -1.8
PDX1P52945 AC004263.1-201ENST00000479327 332 ntBASIC3.82□□□□□ -1.8
PDX1P52945 AC013828.1-201ENST00000481845 158 ntBASIC3.82□□□□□ -1.8
PDX1P52945 RPS6P4-201ENST00000494693 758 ntBASIC3.82□□□□□ -1.8
PDX1P52945 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.82□□□□□ -1.8
PDX1P52945 SETP14-201ENST00000497538 873 ntBASIC3.82□□□□□ -1.8
PDX1P52945 HMGB1P21-201ENST00000502313 581 ntBASIC3.82□□□□□ -1.8
PDX1P52945 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.82□□□□□ -1.8
PDX1P52945 SNX5P1-201ENST00000505757 1041 ntBASIC3.82□□□□□ -1.8
PDX1P52945 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.82□□□□□ -1.8
PDX1P52945 MTCO1P30-201ENST00000515244 580 ntBASIC3.82□□□□□ -1.8
PDX1P52945 RN7SKP82-201ENST00000516786 223 ntBASIC3.82□□□□□ -1.8
PDX1P52945 RN7SKP277-201ENST00000516895 283 ntBASIC3.82□□□□□ -1.8
PDX1P52945 SCARNA14-201ENST00000516903 136 ntBASIC3.82□□□□□ -1.8
PDX1P52945 RNA5SP179-201ENST00000517284 121 ntBASIC3.82□□□□□ -1.8
PDX1P52945 AC007991.1-201ENST00000522680 631 ntBASIC3.82□□□□□ -1.8
PDX1P52945 AC022790.1-201ENST00000522872 204 ntBASIC3.82□□□□□ -1.8
PDX1P52945 AC090281.1-201ENST00000523019 276 ntBASIC3.82□□□□□ -1.8
PDX1P52945 PTP4A1P6-201ENST00000531034 478 ntBASIC3.82□□□□□ -1.8
PDX1P52945 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.82□□□□□ -1.8
PDX1P52945 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.82□□□□□ -1.8
PDX1P52945 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.82□□□□□ -1.8
PDX1P52945 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.82□□□□□ -1.8
PDX1P52945 AC090502.2-201ENST00000549267 280 ntBASIC3.82□□□□□ -1.8
PDX1P52945 AL161713.1-201ENST00000555538 145 ntBASIC3.82□□□□□ -1.8
PDX1P52945 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.82□□□□□ -1.8
PDX1P52945 AC087465.1-201ENST00000560574 245 ntBASIC3.82□□□□□ -1.8
PDX1P52945 AC079171.1-201ENST00000568788 914 ntBASIC3.82□□□□□ -1.8
PDX1P52945 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
PDX1P52945 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.82□□□□□ -1.8
PDX1P52945 AL161756.2-201ENST00000604597 246 ntBASIC3.82□□□□□ -1.8
PDX1P52945 AC091167.4-201ENST00000605079 184 ntBASIC3.82□□□□□ -1.8
PDX1P52945 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.82□□□□□ -1.8
PDX1P52945 AL450489.1-201ENST00000612071 468 ntBASIC3.82□□□□□ -1.8
PDX1P52945 AL139418.1-201ENST00000613613 177 ntBASIC3.82□□□□□ -1.8
PDX1P52945 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.82□□□□□ -1.8
PDX1P52945 MIR1322-201ENST00000638013 71 ntBASIC3.82□□□□□ -1.8
PDX1P52945 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PDX1P52945 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PDX1P52945 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
PDX1P52945 AC097504.1-201ENST00000515103 2415 ntBASIC3.82□□□□□ -1.8
PDX1P52945 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PDX1P52945 AL049555.1-201ENST00000562834 1933 ntBASIC3.82□□□□□ -1.8
PDX1P52945 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PDX1P52945 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PDX1P52945 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.81□□□□□ -1.8
PDX1P52945 AC012020.1-201ENST00000624541 1728 ntBASIC3.81□□□□□ -1.8
PDX1P52945 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PDX1P52945 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PDX1P52945 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.81□□□□□ -1.8
PDX1P52945 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PDX1P52945 LINC02471-203ENST00000641941 4752 ntBASIC3.81□□□□□ -1.8
PDX1P52945 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PDX1P52945 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PDX1P52945 Y_RNA.25-201ENST00000362528 102 ntBASIC3.81□□□□□ -1.8
PDX1P52945 SNORD35B-201ENST00000363660 87 ntBASIC3.81□□□□□ -1.8
PDX1P52945 SNORA5A-201ENST00000384111 134 ntBASIC3.81□□□□□ -1.8
PDX1P52945 RPL17P50-201ENST00000396131 546 ntBASIC3.81□□□□□ -1.8
PDX1P52945 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.81□□□□□ -1.8
PDX1P52945 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.81□□□□□ -1.8
PDX1P52945 RNU2-28P-201ENST00000410457 189 ntBASIC3.81□□□□□ -1.8
PDX1P52945 RNA5SP104-201ENST00000410989 118 ntBASIC3.81□□□□□ -1.8
PDX1P52945 SYF2P2-201ENST00000417620 583 ntBASIC3.81□□□□□ -1.8
PDX1P52945 AC006960.1-201ENST00000419980 153 ntBASIC3.81□□□□□ -1.8
PDX1P52945 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.81□□□□□ -1.8
PDX1P52945 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.81□□□□□ -1.8
PDX1P52945 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PDX1P52945 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.81□□□□□ -1.8
PDX1P52945 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.81□□□□□ -1.8
PDX1P52945 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.81□□□□□ -1.8
PDX1P52945 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.81□□□□□ -1.8
PDX1P52945 BX276092.4-201ENST00000452056 248 ntBASIC3.81□□□□□ -1.8
PDX1P52945 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.81□□□□□ -1.8
PDX1P52945 ANKRD26P4-201ENST00000455755 950 ntBASIC3.81□□□□□ -1.8
PDX1P52945 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.81□□□□□ -1.8
PDX1P52945 MTND1P16-201ENST00000465177 898 ntBASIC3.81□□□□□ -1.8
PDX1P52945 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.81□□□□□ -1.8
PDX1P52945 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.81□□□□□ -1.8
PDX1P52945 AC109445.1-201ENST00000512356 383 ntBASIC3.81□□□□□ -1.8
PDX1P52945 RNU1-95P-201ENST00000516357 160 ntBASIC3.81□□□□□ -1.8
PDX1P52945 RNU1-128P-201ENST00000516704 160 ntBASIC3.81□□□□□ -1.8
PDX1P52945 IGKV2-38-201ENST00000517443 247 ntBASIC3.81□□□□□ -1.8
PDX1P52945 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.81□□□□□ -1.8
PDX1P52945 UBTFL10-201ENST00000528532 562 ntBASIC3.81□□□□□ -1.8
PDX1P52945 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.81□□□□□ -1.8
PDX1P52945 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.81□□□□□ -1.8
PDX1P52945 AC091516.1-201ENST00000549191 703 ntBASIC3.81□□□□□ -1.8
PDX1P52945 AC125611.1-201ENST00000549563 229 ntBASIC3.81□□□□□ -1.8
PDX1P52945 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.81□□□□□ -1.8
PDX1P52945 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.81□□□□□ -1.8
PDX1P52945 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.81□□□□□ -1.8
PDX1P52945 OR4K7P-201ENST00000580232 945 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms