Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC139783.2-201ENST00000504847 1145 ntBASIC4.04□□□□□ -1.76
CLCNKAP51800 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.04□□□□□ -1.76
CLCNKAP51800 HMGB1P28-201ENST00000507778 552 ntBASIC4.04□□□□□ -1.76
CLCNKAP51800 AC093824.1-201ENST00000508796 343 ntBASIC4.04□□□□□ -1.76
CLCNKAP51800 MTND1P22-201ENST00000510572 951 ntBASIC4.04□□□□□ -1.76
CLCNKAP51800 AC108064.1-201ENST00000513791 460 ntBASIC4.04□□□□□ -1.76
CLCNKAP51800 Vault.1-201ENST00000516474 102 ntBASIC4.04□□□□□ -1.76
CLCNKAP51800 RN7SKP234-201ENST00000517173 224 ntBASIC4.04□□□□□ -1.76
CLCNKAP51800 IGLVIV-53-201ENST00000520107 367 ntBASIC4.04□□□□□ -1.76
CLCNKAP51800 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.04□□□□□ -1.76
CLCNKAP51800 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.04□□□□□ -1.76
CLCNKAP51800 AP000790.1-201ENST00000528891 737 ntBASIC4.04□□□□□ -1.76
CLCNKAP51800 OR8R1P-201ENST00000543943 764 ntBASIC4.04□□□□□ -1.76
CLCNKAP51800 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.04□□□□□ -1.76
CLCNKAP51800 AC125611.1-201ENST00000549563 229 ntBASIC4.04□□□□□ -1.76
CLCNKAP51800 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.04□□□□□ -1.76
CLCNKAP51800 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC4.04□□□□□ -1.76
CLCNKAP51800 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.04□□□□□ -1.76
CLCNKAP51800 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.04□□□□□ -1.76
CLCNKAP51800 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.04□□□□□ -1.76
CLCNKAP51800 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.04□□□□□ -1.76
CLCNKAP51800 AC040904.1-201ENST00000590850 223 ntBASIC4.04□□□□□ -1.76
CLCNKAP51800 AC025946.2-201ENST00000603398 234 ntBASIC4.04□□□□□ -1.76
CLCNKAP51800 AC010738.1-201ENST00000604970 987 ntBASIC4.04□□□□□ -1.76
CLCNKAP51800 AC124312.4-201ENST00000605533 310 ntBASIC4.04□□□□□ -1.76
CLCNKAP51800 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.04□□□□□ -1.76
CLCNKAP51800 AC245297.2-201ENST00000610119 565 ntBASIC4.04□□□□□ -1.76
CLCNKAP51800 AC004223.4-201ENST00000612426 332 ntBASIC4.04□□□□□ -1.76
CLCNKAP51800 AC008083.4-201ENST00000615076 444 ntBASIC4.04□□□□□ -1.76
CLCNKAP51800 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.04□□□□□ -1.76
CLCNKAP51800 AC098679.5-201ENST00000624394 571 ntBASIC4.04□□□□□ -1.76
CLCNKAP51800 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.04□□□□□ -1.76
CLCNKAP51800 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.04□□□□□ -1.76
CLCNKAP51800 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CLCNKAP51800 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CLCNKAP51800 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
CLCNKAP51800 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CLCNKAP51800 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CLCNKAP51800 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CLCNKAP51800 AC087359.1-201ENST00000508335 1740 ntBASIC4.04□□□□□ -1.76
CLCNKAP51800 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
CLCNKAP51800 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.04□□□□□ -1.76
CLCNKAP51800 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLCNKAP51800 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLCNKAP51800 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.03□□□□□ -1.76
CLCNKAP51800 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLCNKAP51800 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.03□□□□□ -1.76
CLCNKAP51800 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLCNKAP51800 SPRR2C-201ENST00000290702 219 ntBASIC4.03□□□□□ -1.76
CLCNKAP51800 OR4A15-201ENST00000314706 1035 ntBASIC4.03□□□□□ -1.76
CLCNKAP51800 RNU5A-2P-201ENST00000384337 116 ntBASIC4.03□□□□□ -1.76
CLCNKAP51800 SNORA70E-201ENST00000384492 135 ntBASIC4.03□□□□□ -1.76
CLCNKAP51800 SNORA57.1-201ENST00000391227 145 ntBASIC4.03□□□□□ -1.76
CLCNKAP51800 AL021407.1-201ENST00000404531 386 ntBASIC4.03□□□□□ -1.76
CLCNKAP51800 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
CLCNKAP51800 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.03□□□□□ -1.76
CLCNKAP51800 AL390023.1-201ENST00000428836 262 ntBASIC4.03□□□□□ -1.76
CLCNKAP51800 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.03□□□□□ -1.76
CLCNKAP51800 KATNBL1P3-201ENST00000443475 909 ntBASIC4.03□□□□□ -1.76
CLCNKAP51800 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.03□□□□□ -1.76
CLCNKAP51800 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.03□□□□□ -1.76
CLCNKAP51800 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.03□□□□□ -1.76
CLCNKAP51800 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.03□□□□□ -1.76
CLCNKAP51800 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.03□□□□□ -1.76
CLCNKAP51800 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.03□□□□□ -1.76
CLCNKAP51800 SYPL1P1-201ENST00000473622 768 ntBASIC4.03□□□□□ -1.76
CLCNKAP51800 AC013828.1-201ENST00000481845 158 ntBASIC4.03□□□□□ -1.76
CLCNKAP51800 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.03□□□□□ -1.76
CLCNKAP51800 AC093281.2-201ENST00000510153 597 ntBASIC4.03□□□□□ -1.76
CLCNKAP51800 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.03□□□□□ -1.76
CLCNKAP51800 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.03□□□□□ -1.76
CLCNKAP51800 OR5AK1P-201ENST00000524837 922 ntBASIC4.03□□□□□ -1.76
CLCNKAP51800 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.03□□□□□ -1.76
CLCNKAP51800 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.03□□□□□ -1.76
CLCNKAP51800 SLC2A13P1-201ENST00000531560 322 ntBASIC4.03□□□□□ -1.76
CLCNKAP51800 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.03□□□□□ -1.76
CLCNKAP51800 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.03□□□□□ -1.76
CLCNKAP51800 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.03□□□□□ -1.76
CLCNKAP51800 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.03□□□□□ -1.76
CLCNKAP51800 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.03□□□□□ -1.76
CLCNKAP51800 AL512347.1-201ENST00000566420 503 ntBASIC4.03□□□□□ -1.76
CLCNKAP51800 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.03□□□□□ -1.76
CLCNKAP51800 AP005136.1-201ENST00000579765 429 ntBASIC4.03□□□□□ -1.76
CLCNKAP51800 SNORD39.3-201ENST00000584451 71 ntBASIC4.03□□□□□ -1.76
CLCNKAP51800 AC018714.1-201ENST00000605028 208 ntBASIC4.03□□□□□ -1.76
CLCNKAP51800 AC112220.3-201ENST00000605502 502 ntBASIC4.03□□□□□ -1.76
CLCNKAP51800 AC064807.4-201ENST00000607201 407 ntBASIC4.03□□□□□ -1.76
CLCNKAP51800 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.03□□□□□ -1.76
CLCNKAP51800 AC064801.1-201ENST00000612025 407 ntBASIC4.03□□□□□ -1.76
CLCNKAP51800 AC122133.1-201ENST00000613964 233 ntBASIC4.03□□□□□ -1.76
CLCNKAP51800 AF246928.1-201ENST00000623768 87 ntBASIC4.03□□□□□ -1.76
CLCNKAP51800 MIR4496-201ENST00000635896 61 ntBASIC4.03□□□□□ -1.76
CLCNKAP51800 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.03□□□□□ -1.76
CLCNKAP51800 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLCNKAP51800 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLCNKAP51800 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CLCNKAP51800 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.03□□□□□ -1.76
CLCNKAP51800 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.03□□□□□ -1.76
CLCNKAP51800 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CLCNKAP51800 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms