Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 MED6P1-201ENST00000439659 713 ntBASIC3.11□□□□□ -1.91
CXCL12P48061 AL513321.1-201ENST00000441175 761 ntBASIC3.11□□□□□ -1.91
CXCL12P48061 AL135938.1-201ENST00000443141 297 ntBASIC3.11□□□□□ -1.91
CXCL12P48061 XKRYP5-201ENST00000449659 483 ntBASIC3.11□□□□□ -1.91
CXCL12P48061 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.11□□□□□ -1.91
CXCL12P48061 RPL12P26-201ENST00000452430 487 ntBASIC3.11□□□□□ -1.91
CXCL12P48061 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.11□□□□□ -1.91
CXCL12P48061 RPS4XP2-201ENST00000458402 793 ntBASIC3.11□□□□□ -1.91
CXCL12P48061 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.11□□□□□ -1.91
CXCL12P48061 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.11□□□□□ -1.91
CXCL12P48061 AL049830.2-201ENST00000480072 201 ntBASIC3.11□□□□□ -1.91
CXCL12P48061 RPS4XP13-201ENST00000483219 789 ntBASIC3.11□□□□□ -1.91
CXCL12P48061 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.11□□□□□ -1.91
CXCL12P48061 AP001086.1-201ENST00000494882 321 ntBASIC3.11□□□□□ -1.91
CXCL12P48061 AC083906.5-201ENST00000503722 328 ntBASIC3.11□□□□□ -1.91
CXCL12P48061 PRELID3BP6-201ENST00000503839 571 ntBASIC3.11□□□□□ -1.91
CXCL12P48061 AC017037.2-201ENST00000513850 890 ntBASIC3.11□□□□□ -1.91
CXCL12P48061 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.11□□□□□ -1.91
CXCL12P48061 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.11□□□□□ -1.91
CXCL12P48061 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.11□□□□□ -1.91
CXCL12P48061 AC007423.1-201ENST00000605009 627 ntBASIC3.11□□□□□ -1.91
CXCL12P48061 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.11□□□□□ -1.91
CXCL12P48061 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CXCL12P48061 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.11□□□□□ -1.91
CXCL12P48061 IGHVIII-44-202ENST00000636235 289 ntBASIC3.11□□□□□ -1.91
CXCL12P48061 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.11□□□□□ -1.91
CXCL12P48061 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CXCL12P48061 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CXCL12P48061 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
CXCL12P48061 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CXCL12P48061 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.1□□□□□ -1.91
CXCL12P48061 FAM35BP-202ENST00000497389 3337 ntBASIC3.1□□□□□ -1.91
CXCL12P48061 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CXCL12P48061 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CXCL12P48061 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
CXCL12P48061 AL672296.1-201ENST00000427780 2158 ntBASIC3.1□□□□□ -1.91
CXCL12P48061 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
CXCL12P48061 RAD1P1-201ENST00000231383 813 ntBASIC3.1□□□□□ -1.91
CXCL12P48061 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CXCL12P48061 RNA5SP322-201ENST00000363617 119 ntBASIC3.1□□□□□ -1.91
CXCL12P48061 MIR142-201ENST00000384835 87 ntBASIC3.1□□□□□ -1.91
CXCL12P48061 RN7SKP56-201ENST00000410513 331 ntBASIC3.1□□□□□ -1.91
CXCL12P48061 AC105272.1-201ENST00000438604 198 ntBASIC3.1□□□□□ -1.91
CXCL12P48061 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.1□□□□□ -1.91
CXCL12P48061 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.1□□□□□ -1.91
CXCL12P48061 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.1□□□□□ -1.91
CXCL12P48061 RPS29P26-201ENST00000477483 171 ntBASIC3.1□□□□□ -1.91
CXCL12P48061 ACTG1P13-201ENST00000486987 1043 ntBASIC3.1□□□□□ -1.91
CXCL12P48061 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.1□□□□□ -1.91
CXCL12P48061 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.1□□□□□ -1.91
CXCL12P48061 SETP12-201ENST00000514068 805 ntBASIC3.1□□□□□ -1.91
CXCL12P48061 COX6CP8-201ENST00000522620 226 ntBASIC3.1□□□□□ -1.91
CXCL12P48061 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.1□□□□□ -1.91
CXCL12P48061 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.1□□□□□ -1.91
CXCL12P48061 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.1□□□□□ -1.91
CXCL12P48061 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.1□□□□□ -1.91
CXCL12P48061 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.1□□□□□ -1.91
CXCL12P48061 AC233266.2-201ENST00000567067 528 ntBASIC3.1□□□□□ -1.91
CXCL12P48061 MIR4319-201ENST00000577285 85 ntBASIC3.1□□□□□ -1.91
CXCL12P48061 MIR4435-1-201ENST00000582552 80 ntBASIC3.1□□□□□ -1.91
CXCL12P48061 AP003117.1-201ENST00000602771 554 ntBASIC3.1□□□□□ -1.91
CXCL12P48061 NRBF2P5-201ENST00000603087 788 ntBASIC3.1□□□□□ -1.91
CXCL12P48061 MIR1264-201ENST00000616374 69 ntBASIC3.1□□□□□ -1.91
CXCL12P48061 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.1□□□□□ -1.91
CXCL12P48061 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.1□□□□□ -1.91
CXCL12P48061 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.1□□□□□ -1.91
CXCL12P48061 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.1□□□□□ -1.91
CXCL12P48061 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CXCL12P48061 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
CXCL12P48061 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CXCL12P48061 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.09□□□□□ -1.91
CXCL12P48061 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.09□□□□□ -1.91
CXCL12P48061 LINC01347-201ENST00000417964 355 ntBASIC3.09□□□□□ -1.91
CXCL12P48061 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.09□□□□□ -1.91
CXCL12P48061 Z93242.1-201ENST00000427102 353 ntBASIC3.09□□□□□ -1.91
CXCL12P48061 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.09□□□□□ -1.91
CXCL12P48061 RPS24P13-201ENST00000442520 397 ntBASIC3.09□□□□□ -1.91
CXCL12P48061 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.09□□□□□ -1.91
CXCL12P48061 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.09□□□□□ -1.91
CXCL12P48061 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CXCL12P48061 MTND2P8-201ENST00000450555 1025 ntBASIC3.09□□□□□ -1.91
CXCL12P48061 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.09□□□□□ -1.91
CXCL12P48061 CFTRP1-201ENST00000456646 183 ntBASIC3.09□□□□□ -1.91
CXCL12P48061 AC010683.1-201ENST00000473673 378 ntBASIC3.09□□□□□ -1.91
CXCL12P48061 FCF1P3-201ENST00000496394 590 ntBASIC3.09□□□□□ -1.91
CXCL12P48061 AC114967.1-201ENST00000504890 259 ntBASIC3.09□□□□□ -1.91
CXCL12P48061 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.09□□□□□ -1.91
CXCL12P48061 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.09□□□□□ -1.91
CXCL12P48061 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.09□□□□□ -1.91
CXCL12P48061 AC087272.1-201ENST00000523624 533 ntBASIC3.09□□□□□ -1.91
CXCL12P48061 AP002812.4-201ENST00000532139 286 ntBASIC3.09□□□□□ -1.91
CXCL12P48061 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.09□□□□□ -1.91
CXCL12P48061 LINC00557-201ENST00000563184 1279 ntBASIC3.09□□□□□ -1.91
CXCL12P48061 U7.8-201ENST00000619968 63 ntBASIC3.09□□□□□ -1.91
CXCL12P48061 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CXCL12P48061 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.09□□□□□ -1.91
CXCL12P48061 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CXCL12P48061 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CXCL12P48061 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CXCL12P48061 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms