Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 RNU7-125P-201ENST00000458760 62 ntBASIC3.27□□□□□ -1.89
ATRXP46100 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
ATRXP46100 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.27□□□□□ -1.89
ATRXP46100 AC107401.1-201ENST00000503426 685 ntBASIC3.27□□□□□ -1.89
ATRXP46100 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.27□□□□□ -1.89
ATRXP46100 RN7SKP34-201ENST00000516142 244 ntBASIC3.27□□□□□ -1.89
ATRXP46100 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.27□□□□□ -1.89
ATRXP46100 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.27□□□□□ -1.89
ATRXP46100 AC022880.1-201ENST00000534017 973 ntBASIC3.27□□□□□ -1.89
ATRXP46100 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.27□□□□□ -1.89
ATRXP46100 ISCA1P3-201ENST00000577104 373 ntBASIC3.27□□□□□ -1.89
ATRXP46100 AC127024.5-201ENST00000580085 462 ntBASIC3.27□□□□□ -1.89
ATRXP46100 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.27□□□□□ -1.89
ATRXP46100 MIR4278-201ENST00000636094 69 ntBASIC3.27□□□□□ -1.89
ATRXP46100 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.26□□□□□ -1.89
ATRXP46100 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.26□□□□□ -1.89
ATRXP46100 MTND4P10-201ENST00000446199 1363 ntBASIC3.26□□□□□ -1.89
ATRXP46100 MTND5P23-201ENST00000430812 1655 ntBASIC3.26□□□□□ -1.89
ATRXP46100 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ATRXP46100 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ATRXP46100 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
ATRXP46100 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
ATRXP46100 AL136116.1-201ENST00000403591 381 ntBASIC3.26□□□□□ -1.89
ATRXP46100 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.26□□□□□ -1.89
ATRXP46100 LIPT1P1-201ENST00000415870 1186 ntBASIC3.26□□□□□ -1.89
ATRXP46100 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.26□□□□□ -1.89
ATRXP46100 OR5AW1P-201ENST00000426334 1006 ntBASIC3.26□□□□□ -1.89
ATRXP46100 MYL8P-204ENST00000431574 518 ntBASIC3.26□□□□□ -1.89
ATRXP46100 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.26□□□□□ -1.89
ATRXP46100 AC091179.1-201ENST00000461606 579 ntBASIC3.26□□□□□ -1.89
ATRXP46100 RN7SL863P-201ENST00000462370 296 ntBASIC3.26□□□□□ -1.89
ATRXP46100 AC107398.1-201ENST00000486904 505 ntBASIC3.26□□□□□ -1.89
ATRXP46100 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.26□□□□□ -1.89
ATRXP46100 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC3.26□□□□□ -1.89
ATRXP46100 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.26□□□□□ -1.89
ATRXP46100 HSPE1P23-201ENST00000509838 286 ntBASIC3.26□□□□□ -1.89
ATRXP46100 AC114781.4-201ENST00000513707 639 ntBASIC3.26□□□□□ -1.89
ATRXP46100 AC008694.2-201ENST00000517591 306 ntBASIC3.26□□□□□ -1.89
ATRXP46100 AC091163.3-201ENST00000518269 1144 ntBASIC3.26□□□□□ -1.89
ATRXP46100 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.26□□□□□ -1.89
ATRXP46100 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC3.26□□□□□ -1.89
ATRXP46100 MTCYBP28-201ENST00000566728 1132 ntBASIC3.26□□□□□ -1.89
ATRXP46100 AL158042.1-201ENST00000605338 460 ntBASIC3.26□□□□□ -1.89
ATRXP46100 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ATRXP46100 AC135507.1-201ENST00000607214 561 ntBASIC3.26□□□□□ -1.89
ATRXP46100 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ATRXP46100 AC092184.1-201ENST00000625042 715 ntBASIC3.26□□□□□ -1.89
ATRXP46100 AP000553.6-201ENST00000641242 118 ntBASIC3.26□□□□□ -1.89
ATRXP46100 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
ATRXP46100 BX005019.1-201ENST00000561881 1810 ntBASIC3.26□□□□□ -1.89
ATRXP46100 ELF2P3-201ENST00000445099 1506 ntBASIC3.26□□□□□ -1.89
ATRXP46100 AC139713.2-215ENST00000641428 5037 ntBASIC3.26□□□□□ -1.89
ATRXP46100 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.26□□□□□ -1.89
ATRXP46100 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ATRXP46100 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ATRXP46100 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ATRXP46100 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
ATRXP46100 SNORD56.4-201ENST00000363883 71 ntBASIC3.26□□□□□ -1.89
ATRXP46100 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
ATRXP46100 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
ATRXP46100 SNORD116-9-201ENST00000384000 95 ntBASIC3.26□□□□□ -1.89
ATRXP46100 SNORD116-3-201ENST00000384287 95 ntBASIC3.26□□□□□ -1.89
ATRXP46100 SNORD116-7-201ENST00000384404 95 ntBASIC3.26□□□□□ -1.89
ATRXP46100 SNORD116-5-201ENST00000384462 95 ntBASIC3.26□□□□□ -1.89
ATRXP46100 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.26□□□□□ -1.89
ATRXP46100 RPS24P7-201ENST00000416921 246 ntBASIC3.26□□□□□ -1.89
ATRXP46100 AL356320.2-201ENST00000417263 507 ntBASIC3.26□□□□□ -1.89
ATRXP46100 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ATRXP46100 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.26□□□□□ -1.89
ATRXP46100 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.26□□□□□ -1.89
ATRXP46100 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.26□□□□□ -1.89
ATRXP46100 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.26□□□□□ -1.89
ATRXP46100 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ATRXP46100 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.26□□□□□ -1.89
ATRXP46100 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.26□□□□□ -1.89
ATRXP46100 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.26□□□□□ -1.89
ATRXP46100 AC006445.1-201ENST00000491925 405 ntBASIC3.26□□□□□ -1.89
ATRXP46100 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC3.26□□□□□ -1.89
ATRXP46100 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.26□□□□□ -1.89
ATRXP46100 AP003717.3-201ENST00000544832 1180 ntBASIC3.26□□□□□ -1.89
ATRXP46100 AC008011.1-201ENST00000545989 227 ntBASIC3.26□□□□□ -1.89
ATRXP46100 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.26□□□□□ -1.89
ATRXP46100 AC022662.1-201ENST00000580252 331 ntBASIC3.26□□□□□ -1.89
ATRXP46100 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.26□□□□□ -1.89
ATRXP46100 AL450489.1-201ENST00000612071 468 ntBASIC3.26□□□□□ -1.89
ATRXP46100 Xist_exon4.1-201ENST00000615964 126 ntBASIC3.26□□□□□ -1.89
ATRXP46100 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.26□□□□□ -1.89
ATRXP46100 AC026422.1-201ENST00000623961 452 ntBASIC3.26□□□□□ -1.89
ATRXP46100 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
ATRXP46100 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
ATRXP46100 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
ATRXP46100 MTND4P5-201ENST00000435821 1374 ntBASIC3.25□□□□□ -1.89
ATRXP46100 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.25□□□□□ -1.89
ATRXP46100 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
ATRXP46100 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.25□□□□□ -1.89
ATRXP46100 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
ATRXP46100 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.25□□□□□ -1.89
ATRXP46100 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
ATRXP46100 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.25□□□□□ -1.89
ATRXP46100 RNU6-1200P-201ENST00000384162 107 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms