Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
HTTP42858 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
HTTP42858 MORF4L1P6-201ENST00000418771 268 ntBASIC2.77□□□□□ -1.97
HTTP42858 AC007677.1-201ENST00000445757 515 ntBASIC2.77□□□□□ -1.97
HTTP42858 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.77□□□□□ -1.97
HTTP42858 Y_RNA.670-201ENST00000516255 105 ntBASIC2.77□□□□□ -1.97
HTTP42858 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.77□□□□□ -1.97
HTTP42858 AC023043.2-201ENST00000589678 1026 ntBASIC2.77□□□□□ -1.97
HTTP42858 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC2.77□□□□□ -1.97
HTTP42858 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HTTP42858 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
HTTP42858 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
HTTP42858 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
HTTP42858 AC016687.1-201ENST00000482574 353 ntBASIC2.76□□□□□ -1.97
HTTP42858 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC2.76□□□□□ -1.97
HTTP42858 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.76□□□□□ -1.97
HTTP42858 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC2.76□□□□□ -1.97
HTTP42858 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
HTTP42858 RPS12P23-201ENST00000419579 400 ntBASIC2.76□□□□□ -1.97
HTTP42858 AC009263.1-201ENST00000441193 1239 ntBASIC2.76□□□□□ -1.97
HTTP42858 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.76□□□□□ -1.97
HTTP42858 AC067747.1-201ENST00000608026 250 ntBASIC2.76□□□□□ -1.97
HTTP42858 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC2.76□□□□□ -1.97
HTTP42858 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.76□□□□□ -1.97
HTTP42858 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
HTTP42858 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC2.76□□□□□ -1.97
HTTP42858 USP8P1-201ENST00000494673 3183 ntBASIC2.75□□□□□ -1.97
HTTP42858 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.75□□□□□ -1.97
HTTP42858 SNORA26.9-201ENST00000391322 122 ntBASIC2.75□□□□□ -1.97
HTTP42858 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HTTP42858 FABP5P12-201ENST00000515543 389 ntBASIC2.75□□□□□ -1.97
HTTP42858 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.75□□□□□ -1.97
HTTP42858 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HTTP42858 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.75□□□□□ -1.97
HTTP42858 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HTTP42858 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
HTTP42858 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HTTP42858 VDAC1P3-201ENST00000434069 851 ntBASIC2.75□□□□□ -1.97
HTTP42858 AL024509.2-201ENST00000493462 493 ntBASIC2.75□□□□□ -1.97
HTTP42858 TRAV11-201ENST00000539512 339 ntBASIC2.75□□□□□ -1.97
HTTP42858 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HTTP42858 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HTTP42858 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HTTP42858 GABPAP-201ENST00000419271 1356 ntBASIC2.75□□□□□ -1.97
HTTP42858 OR52B1P-201ENST00000316506 909 ntBASIC2.75□□□□□ -1.97
HTTP42858 AL121834.1-202ENST00000404494 277 ntBASIC2.75□□□□□ -1.97
HTTP42858 AC007064.1-201ENST00000412238 351 ntBASIC2.75□□□□□ -1.97
HTTP42858 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC2.75□□□□□ -1.97
HTTP42858 AC055855.1-201ENST00000489563 579 ntBASIC2.75□□□□□ -1.97
HTTP42858 AC104237.2-201ENST00000612456 443 ntBASIC2.75□□□□□ -1.97
HTTP42858 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
HTTP42858 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HTTP42858 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
HTTP42858 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
HTTP42858 AC069528.2-201ENST00000624849 1991 ntBASIC2.74□□□□□ -1.97
HTTP42858 AC010881.1-201ENST00000433830 235 ntBASIC2.74□□□□□ -1.97
HTTP42858 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.74□□□□□ -1.97
HTTP42858 FAM60DP-201ENST00000524174 632 ntBASIC2.74□□□□□ -1.97
HTTP42858 AL359893.1-201ENST00000447628 1580 ntBASIC2.74□□□□□ -1.97
HTTP42858 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.74□□□□□ -1.97
HTTP42858 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
HTTP42858 GSTA9P-201ENST00000406231 611 ntBASIC2.74□□□□□ -1.97
HTTP42858 AC090543.2-201ENST00000483963 348 ntBASIC2.74□□□□□ -1.97
HTTP42858 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.74□□□□□ -1.97
HTTP42858 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.74□□□□□ -1.97
HTTP42858 AC117522.2-201ENST00000510049 657 ntBASIC2.74□□□□□ -1.97
HTTP42858 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
HTTP42858 AC110994.2-201ENST00000635481 492 ntBASIC2.74□□□□□ -1.97
HTTP42858 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.73□□□□□ -1.97
HTTP42858 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC2.73□□□□□ -1.97
HTTP42858 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.73□□□□□ -1.97
HTTP42858 FAM92A1P2-202ENST00000504766 877 ntBASIC2.73□□□□□ -1.97
HTTP42858 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.73□□□□□ -1.97
HTTP42858 AL591516.1-201ENST00000611326 274 ntBASIC2.73□□□□□ -1.97
HTTP42858 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.73□□□□□ -1.97
HTTP42858 AC117529.2-201ENST00000512159 2068 ntBASIC2.73□□□□□ -1.97
HTTP42858 AC083843.2-201ENST00000568248 6253 ntBASIC2.73□□□□□ -1.97
HTTP42858 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
HTTP42858 GTF2IP23-201ENST00000423746 351 ntBASIC2.73□□□□□ -1.97
HTTP42858 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.73□□□□□ -1.97
HTTP42858 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.73□□□□□ -1.97
HTTP42858 RPL5P16-201ENST00000471467 790 ntBASIC2.73□□□□□ -1.97
HTTP42858 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HTTP42858 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
HTTP42858 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.73□□□□□ -1.97
HTTP42858 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.73□□□□□ -1.97
HTTP42858 AC026464.5-201ENST00000562497 722 ntBASIC2.73□□□□□ -1.97
HTTP42858 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC2.73□□□□□ -1.97
HTTP42858 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2.73□□□□□ -1.97
HTTP42858 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
HTTP42858 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC2.73□□□□□ -1.97
HTTP42858 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC2.73□□□□□ -1.97
HTTP42858 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
HTTP42858 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
HTTP42858 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC2.73□□□□□ -1.97
HTTP42858 RPL23AP49-201ENST00000492925 468 ntBASIC2.73□□□□□ -1.97
HTTP42858 AC118282.1-201ENST00000506408 765 ntBASIC2.73□□□□□ -1.97
HTTP42858 AC128657.1-201ENST00000549459 145 ntBASIC2.73□□□□□ -1.97
HTTP42858 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HTTP42858 AP000919.1-202ENST00000581139 1264 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms