Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.34□□□□□ -1.87
RORAP35398 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.34□□□□□ -1.87
RORAP35398 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.34□□□□□ -1.87
RORAP35398 AF279873.1-201ENST00000523393 313 ntBASIC3.34□□□□□ -1.87
RORAP35398 AP001207.1-201ENST00000524051 481 ntBASIC3.34□□□□□ -1.87
RORAP35398 AP000916.1-201ENST00000533869 835 ntBASIC3.34□□□□□ -1.87
RORAP35398 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.34□□□□□ -1.87
RORAP35398 AC010198.2-201ENST00000550612 259 ntBASIC3.34□□□□□ -1.87
RORAP35398 ATP5F1P7-201ENST00000567330 760 ntBASIC3.34□□□□□ -1.87
RORAP35398 MIR5186-201ENST00000577504 120 ntBASIC3.34□□□□□ -1.87
RORAP35398 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.34□□□□□ -1.87
RORAP35398 AC017100.2-201ENST00000584628 355 ntBASIC3.34□□□□□ -1.87
RORAP35398 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.34□□□□□ -1.87
RORAP35398 AC006213.5-201ENST00000619673 288 ntBASIC3.34□□□□□ -1.87
RORAP35398 U4.6-201ENST00000621618 127 ntBASIC3.34□□□□□ -1.87
RORAP35398 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.34□□□□□ -1.87
RORAP35398 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.34□□□□□ -1.87
RORAP35398 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.34□□□□□ -1.87
RORAP35398 AC008432.1-201ENST00000615912 1320 ntBASIC3.34□□□□□ -1.87
RORAP35398 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
RORAP35398 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.33□□□□□ -1.88
RORAP35398 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.33□□□□□ -1.88
RORAP35398 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RORAP35398 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RORAP35398 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
RORAP35398 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.33□□□□□ -1.88
RORAP35398 AC007656.2-201ENST00000624902 4547 ntBASIC3.33□□□□□ -1.88
RORAP35398 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RORAP35398 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RORAP35398 RNU6-481P-201ENST00000384194 107 ntBASIC3.33□□□□□ -1.88
RORAP35398 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.33□□□□□ -1.88
RORAP35398 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.33□□□□□ -1.88
RORAP35398 AL513174.1-201ENST00000423182 629 ntBASIC3.33□□□□□ -1.88
RORAP35398 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.33□□□□□ -1.88
RORAP35398 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.33□□□□□ -1.88
RORAP35398 AC005019.1-201ENST00000436455 431 ntBASIC3.33□□□□□ -1.88
RORAP35398 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.33□□□□□ -1.88
RORAP35398 AC104978.1-201ENST00000449387 391 ntBASIC3.33□□□□□ -1.88
RORAP35398 RPL23AP15-201ENST00000450202 459 ntBASIC3.33□□□□□ -1.88
RORAP35398 RPL26P28-201ENST00000451325 435 ntBASIC3.33□□□□□ -1.88
RORAP35398 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.33□□□□□ -1.88
RORAP35398 RPL6P9-201ENST00000466502 859 ntBASIC3.33□□□□□ -1.88
RORAP35398 RN7SL594P-201ENST00000470590 287 ntBASIC3.33□□□□□ -1.88
RORAP35398 RN7SL601P-201ENST00000471221 293 ntBASIC3.33□□□□□ -1.88
RORAP35398 AC025518.1-201ENST00000479856 347 ntBASIC3.33□□□□□ -1.88
RORAP35398 RPL21P47-201ENST00000483696 477 ntBASIC3.33□□□□□ -1.88
RORAP35398 AP000563.1-201ENST00000490865 758 ntBASIC3.33□□□□□ -1.88
RORAP35398 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.33□□□□□ -1.88
RORAP35398 AC104108.1-201ENST00000509930 412 ntBASIC3.33□□□□□ -1.88
RORAP35398 RNU2-27P-201ENST00000516185 142 ntBASIC3.33□□□□□ -1.88
RORAP35398 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.33□□□□□ -1.88
RORAP35398 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.33□□□□□ -1.88
RORAP35398 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.33□□□□□ -1.88
RORAP35398 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.33□□□□□ -1.88
RORAP35398 NCAPGP2-201ENST00000557911 754 ntBASIC3.33□□□□□ -1.88
RORAP35398 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.33□□□□□ -1.88
RORAP35398 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.33□□□□□ -1.88
RORAP35398 MIR4474-201ENST00000579189 78 ntBASIC3.33□□□□□ -1.88
RORAP35398 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.33□□□□□ -1.88
RORAP35398 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.33□□□□□ -1.88
RORAP35398 AL442067.2-201ENST00000614033 363 ntBASIC3.33□□□□□ -1.88
RORAP35398 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.33□□□□□ -1.88
RORAP35398 SNORA50A-202ENST00000629536 136 ntBASIC3.33□□□□□ -1.88
RORAP35398 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.33□□□□□ -1.88
RORAP35398 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RORAP35398 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.33□□□□□ -1.88
RORAP35398 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
RORAP35398 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
RORAP35398 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
RORAP35398 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
RORAP35398 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
RORAP35398 MIR23A-201ENST00000385245 73 ntBASIC3.32□□□□□ -1.88
RORAP35398 SNORA11C-201ENST00000408532 129 ntBASIC3.32□□□□□ -1.88
RORAP35398 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.32□□□□□ -1.88
RORAP35398 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.32□□□□□ -1.88
RORAP35398 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.32□□□□□ -1.88
RORAP35398 AL121882.1-201ENST00000422893 417 ntBASIC3.32□□□□□ -1.88
RORAP35398 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.32□□□□□ -1.88
RORAP35398 YWHAZP8-201ENST00000436935 731 ntBASIC3.32□□□□□ -1.88
RORAP35398 AC074367.1-201ENST00000438685 1125 ntBASIC3.32□□□□□ -1.88
RORAP35398 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.32□□□□□ -1.88
RORAP35398 AC007967.1-201ENST00000455422 1159 ntBASIC3.32□□□□□ -1.88
RORAP35398 AC008280.2-201ENST00000455473 307 ntBASIC3.32□□□□□ -1.88
RORAP35398 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.32□□□□□ -1.88
RORAP35398 SYPL1P1-201ENST00000473622 768 ntBASIC3.32□□□□□ -1.88
RORAP35398 AC015724.1-201ENST00000478577 156 ntBASIC3.32□□□□□ -1.88
RORAP35398 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.32□□□□□ -1.88
RORAP35398 CAB39P1-201ENST00000502277 460 ntBASIC3.32□□□□□ -1.88
RORAP35398 MTND3P24-201ENST00000506306 329 ntBASIC3.32□□□□□ -1.88
RORAP35398 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.32□□□□□ -1.88
RORAP35398 IGHV3-76-201ENST00000522465 295 ntBASIC3.32□□□□□ -1.88
RORAP35398 AP004371.1-201ENST00000525240 214 ntBASIC3.32□□□□□ -1.88
RORAP35398 AC109635.4-202ENST00000531666 412 ntBASIC3.32□□□□□ -1.88
RORAP35398 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RORAP35398 UBE2NP1-201ENST00000545592 458 ntBASIC3.32□□□□□ -1.88
RORAP35398 AL121576.1-201ENST00000556055 276 ntBASIC3.32□□□□□ -1.88
RORAP35398 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.32□□□□□ -1.88
RORAP35398 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.32□□□□□ -1.88
RORAP35398 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.32□□□□□ -1.88
RORAP35398 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms