Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.32□□□□□ -1.88
SHMT2P34897 EIF5A2P1-201ENST00000564027 460 ntBASIC3.32□□□□□ -1.88
SHMT2P34897 AC037471.2-201ENST00000564941 598 ntBASIC3.32□□□□□ -1.88
SHMT2P34897 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.32□□□□□ -1.88
SHMT2P34897 ELOCP35-201ENST00000604289 336 ntBASIC3.32□□□□□ -1.88
SHMT2P34897 AL450489.1-201ENST00000612071 468 ntBASIC3.32□□□□□ -1.88
SHMT2P34897 AC078880.5-201ENST00000617845 421 ntBASIC3.32□□□□□ -1.88
SHMT2P34897 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SHMT2P34897 AC244100.1-202ENST00000621554 382 ntBASIC3.32□□□□□ -1.88
SHMT2P34897 AC006065.5-201ENST00000623427 349 ntBASIC3.32□□□□□ -1.88
SHMT2P34897 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SHMT2P34897 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.32□□□□□ -1.88
SHMT2P34897 MIR7153-201ENST00000637758 57 ntBASIC3.32□□□□□ -1.88
SHMT2P34897 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SHMT2P34897 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
SHMT2P34897 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SHMT2P34897 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
SHMT2P34897 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SHMT2P34897 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.31□□□□□ -1.88
SHMT2P34897 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SHMT2P34897 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SHMT2P34897 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SHMT2P34897 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
SHMT2P34897 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
SHMT2P34897 AC025263.3-201ENST00000622965 1396 ntBASIC3.31□□□□□ -1.88
SHMT2P34897 SNORA63.1-201ENST00000362493 131 ntBASIC3.31□□□□□ -1.88
SHMT2P34897 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.31□□□□□ -1.88
SHMT2P34897 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
SHMT2P34897 RNU6-207P-201ENST00000384137 107 ntBASIC3.31□□□□□ -1.88
SHMT2P34897 SNORA70E-201ENST00000384492 135 ntBASIC3.31□□□□□ -1.88
SHMT2P34897 MIR490-201ENST00000384865 128 ntBASIC3.31□□□□□ -1.88
SHMT2P34897 MIR525-201ENST00000384978 85 ntBASIC3.31□□□□□ -1.88
SHMT2P34897 DNAJC19P6-201ENST00000401853 280 ntBASIC3.31□□□□□ -1.88
SHMT2P34897 RNA5SP293-201ENST00000410527 113 ntBASIC3.31□□□□□ -1.88
SHMT2P34897 RPS3AP25-201ENST00000411660 793 ntBASIC3.31□□□□□ -1.88
SHMT2P34897 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.31□□□□□ -1.88
SHMT2P34897 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.31□□□□□ -1.88
SHMT2P34897 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.31□□□□□ -1.88
SHMT2P34897 AC246680.2-201ENST00000422106 389 ntBASIC3.31□□□□□ -1.88
SHMT2P34897 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.31□□□□□ -1.88
SHMT2P34897 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SHMT2P34897 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.31□□□□□ -1.88
SHMT2P34897 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.31□□□□□ -1.88
SHMT2P34897 AL513175.1-201ENST00000431492 780 ntBASIC3.31□□□□□ -1.88
SHMT2P34897 OR51B8P-201ENST00000449892 769 ntBASIC3.31□□□□□ -1.88
SHMT2P34897 BX276092.4-201ENST00000452056 248 ntBASIC3.31□□□□□ -1.88
SHMT2P34897 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.31□□□□□ -1.88
SHMT2P34897 AC007967.1-201ENST00000455422 1159 ntBASIC3.31□□□□□ -1.88
SHMT2P34897 RPS15AP1-201ENST00000457423 391 ntBASIC3.31□□□□□ -1.88
SHMT2P34897 RPL21P10-201ENST00000463521 490 ntBASIC3.31□□□□□ -1.88
SHMT2P34897 PRDX3P4-201ENST00000470828 747 ntBASIC3.31□□□□□ -1.88
SHMT2P34897 AC015908.1-201ENST00000478739 476 ntBASIC3.31□□□□□ -1.88
SHMT2P34897 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.31□□□□□ -1.88
SHMT2P34897 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.31□□□□□ -1.88
SHMT2P34897 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.31□□□□□ -1.88
SHMT2P34897 MTCO3P27-201ENST00000514397 196 ntBASIC3.31□□□□□ -1.88
SHMT2P34897 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.31□□□□□ -1.88
SHMT2P34897 IGKV2-26-201ENST00000518305 343 ntBASIC3.31□□□□□ -1.88
SHMT2P34897 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.31□□□□□ -1.88
SHMT2P34897 MTND1P36-201ENST00000522384 936 ntBASIC3.31□□□□□ -1.88
SHMT2P34897 OR4R3P-201ENST00000525084 838 ntBASIC3.31□□□□□ -1.88
SHMT2P34897 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.31□□□□□ -1.88
SHMT2P34897 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.31□□□□□ -1.88
SHMT2P34897 AC124293.1-201ENST00000530034 493 ntBASIC3.31□□□□□ -1.88
SHMT2P34897 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.31□□□□□ -1.88
SHMT2P34897 AC092451.2-201ENST00000538746 658 ntBASIC3.31□□□□□ -1.88
SHMT2P34897 AC004217.3-201ENST00000551552 878 ntBASIC3.31□□□□□ -1.88
SHMT2P34897 AC011611.1-201ENST00000552179 197 ntBASIC3.31□□□□□ -1.88
SHMT2P34897 NCAPGP2-201ENST00000557911 754 ntBASIC3.31□□□□□ -1.88
SHMT2P34897 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.31□□□□□ -1.88
SHMT2P34897 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.31□□□□□ -1.88
SHMT2P34897 AC017100.2-201ENST00000584628 355 ntBASIC3.31□□□□□ -1.88
SHMT2P34897 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.31□□□□□ -1.88
SHMT2P34897 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.31□□□□□ -1.88
SHMT2P34897 LLPHP1-201ENST00000603571 367 ntBASIC3.31□□□□□ -1.88
SHMT2P34897 AC009948.4-201ENST00000604692 675 ntBASIC3.31□□□□□ -1.88
SHMT2P34897 RNA5SP108-201ENST00000605921 117 ntBASIC3.31□□□□□ -1.88
SHMT2P34897 MIR7975-201ENST00000619350 68 ntBASIC3.31□□□□□ -1.88
SHMT2P34897 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.31□□□□□ -1.88
SHMT2P34897 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.31□□□□□ -1.88
SHMT2P34897 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
SHMT2P34897 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SHMT2P34897 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SHMT2P34897 AC011978.2-201ENST00000569835 2054 ntBASIC3.31□□□□□ -1.88
SHMT2P34897 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.31□□□□□ -1.88
SHMT2P34897 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.3□□□□□ -1.88
SHMT2P34897 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SHMT2P34897 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SHMT2P34897 DCAF13P1-201ENST00000495256 1330 ntBASIC3.3□□□□□ -1.88
SHMT2P34897 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
SHMT2P34897 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SHMT2P34897 DSTNP4-201ENST00000399472 474 ntBASIC3.3□□□□□ -1.88
SHMT2P34897 MTCO3P31-201ENST00000405526 789 ntBASIC3.3□□□□□ -1.88
SHMT2P34897 HSFY4P-201ENST00000415994 1181 ntBASIC3.3□□□□□ -1.88
SHMT2P34897 OR1AA1P-201ENST00000419597 916 ntBASIC3.3□□□□□ -1.88
SHMT2P34897 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.3□□□□□ -1.88
SHMT2P34897 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.3□□□□□ -1.88
SHMT2P34897 AC000041.1-201ENST00000439655 175 ntBASIC3.3□□□□□ -1.88
SHMT2P34897 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SHMT2P34897 AL050341.1-201ENST00000447743 313 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 141.3 ms