Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 PPP1R14D-202ENST00000427255 747 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
HOXD11P31277 AC005300.1-201ENST00000428401 373 ntBASIC8.1□□□□□ -1.11
HOXD11P31277 AC092802.3-201ENST00000434207 420 ntTSL 3 BASIC8.1□□□□□ -1.11
HOXD11P31277 AC006517.1-201ENST00000480485 328 ntBASIC8.1□□□□□ -1.11
HOXD11P31277 RPL10P7-201ENST00000495649 625 ntBASIC8.1□□□□□ -1.11
HOXD11P31277 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC8.1□□□□□ -1.11
HOXD11P31277 RNA5SP459-201ENST00000516628 100 ntBASIC8.1□□□□□ -1.11
HOXD11P31277 IGKV1OR22-1-201ENST00000521497 360 ntBASIC8.1□□□□□ -1.11
HOXD11P31277 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC8.1□□□□□ -1.11
HOXD11P31277 MIR4675-201ENST00000577898 77 ntBASIC8.1□□□□□ -1.11
HOXD11P31277 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC8.1□□□□□ -1.11
HOXD11P31277 AC011471.1-201ENST00000585766 187 ntBASIC8.1□□□□□ -1.11
HOXD11P31277 AL591926.1-201ENST00000620542 217 ntBASIC8.1□□□□□ -1.11
HOXD11P31277 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC8.1□□□□□ -1.11
HOXD11P31277 LINC00595-215ENST00000635422 651 ntTSL 5 BASIC8.1□□□□□ -1.11
HOXD11P31277 CPEB1-209ENST00000614918 4882 ntTSL 5 BASIC8.1□□□□□ -1.11
HOXD11P31277 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC8.1□□□□□ -1.11
HOXD11P31277 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
HOXD11P31277 Z73965.1-201ENST00000623412 2297 ntBASIC8.1□□□□□ -1.11
HOXD11P31277 RRP8-201ENST00000254605 6560 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
HOXD11P31277 NEK10-201ENST00000295720 2871 ntTSL 2 BASIC8.1□□□□□ -1.11
HOXD11P31277 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
HOXD11P31277 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC8.1□□□□□ -1.11
HOXD11P31277 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
HOXD11P31277 PPFIA2-216ENST00000549396 5363 ntAPPRIS P4 TSL 1 (best) BASIC8.1□□□□□ -1.11
HOXD11P31277 AC092329.4-202ENST00000638174 1989 ntTSL 2 BASIC8.1□□□□□ -1.11
HOXD11P31277 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
HOXD11P31277 OR52B5P-204ENST00000641744 3467 ntBASIC8.09□□□□□ -1.11
HOXD11P31277 OR7E122P-202ENST00000641144 6171 ntBASIC8.09□□□□□ -1.11
HOXD11P31277 SPTBN1-207ENST00000615901 10226 ntTSL 5 BASIC8.09□□□□□ -1.11
HOXD11P31277 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC8.09□□□□□ -1.11
HOXD11P31277 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
HOXD11P31277 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
HOXD11P31277 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
HOXD11P31277 PTPRT-204ENST00000373190 12559 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
HOXD11P31277 FRMPD2-201ENST00000305531 4665 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
HOXD11P31277 C4BPA-201ENST00000367070 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
HOXD11P31277 SMARCA1-202ENST00000371122 4099 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
HOXD11P31277 GATAD2B-203ENST00000634408 1825 ntTSL 5 BASIC8.09□□□□□ -1.11
HOXD11P31277 Y_RNA.362-201ENST00000365518 110 ntBASIC8.09□□□□□ -1.11
HOXD11P31277 MIR891A-201ENST00000401237 79 ntBASIC8.09□□□□□ -1.11
HOXD11P31277 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC8.09□□□□□ -1.11
HOXD11P31277 AC244670.1-201ENST00000436879 112 ntBASIC8.09□□□□□ -1.11
HOXD11P31277 RN7SL369P-201ENST00000477138 299 ntBASIC8.09□□□□□ -1.11
HOXD11P31277 AC124945.1-201ENST00000485133 188 ntBASIC8.09□□□□□ -1.11
HOXD11P31277 snoU109.6-201ENST00000516831 118 ntBASIC8.09□□□□□ -1.11
HOXD11P31277 IGHVII-78-1-201ENST00000521105 269 ntBASIC8.09□□□□□ -1.11
HOXD11P31277 PYM1-205ENST00000547925 499 ntTSL 3 BASIC8.09□□□□□ -1.11
HOXD11P31277 AC009779.4-201ENST00000554248 611 ntBASIC8.09□□□□□ -1.11
HOXD11P31277 OTX2-203ENST00000554559 715 ntTSL 5 BASIC8.09□□□□□ -1.11
HOXD11P31277 AC093826.2-201ENST00000579042 108 ntBASIC8.09□□□□□ -1.11
HOXD11P31277 AC129492.5-201ENST00000603489 315 ntBASIC8.09□□□□□ -1.11
HOXD11P31277 MIR7150-201ENST00000614393 94 ntBASIC8.09□□□□□ -1.11
HOXD11P31277 BMS1P21-201ENST00000634565 365 ntBASIC8.09□□□□□ -1.11
HOXD11P31277 AC079776.5-201ENST00000641920 211 ntBASIC8.09□□□□□ -1.11
HOXD11P31277 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC8.09□□□□□ -1.11
HOXD11P31277 RHOBTB1-202ENST00000357917 4339 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
HOXD11P31277 GBP4-201ENST00000355754 6127 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
HOXD11P31277 AC011330.1-201ENST00000510070 3235 ntBASIC8.09□□□□□ -1.11
HOXD11P31277 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC8.09□□□□□ -1.11
HOXD11P31277 LSAMP-205ENST00000490035 9446 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
HOXD11P31277 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
HOXD11P31277 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC8.09□□□□□ -1.11
HOXD11P31277 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
HOXD11P31277 TMTC1-201ENST00000256062 8805 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
HOXD11P31277 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC8.09□□□□□ -1.11
HOXD11P31277 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC8.08□□□□□ -1.12
HOXD11P31277 AC025470.1-201ENST00000510053 2032 ntBASIC8.08□□□□□ -1.12
HOXD11P31277 AL080317.3-201ENST00000607434 4315 ntBASIC8.08□□□□□ -1.12
HOXD11P31277 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC8.08□□□□□ -1.12
HOXD11P31277 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
HOXD11P31277 ASB15-205ENST00000451215 2956 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
HOXD11P31277 AC023245.2-201ENST00000530760 2978 ntBASIC8.08□□□□□ -1.12
HOXD11P31277 FAM107B-201ENST00000181796 3785 ntTSL 2 BASIC8.08□□□□□ -1.12
HOXD11P31277 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC8.08□□□□□ -1.12
HOXD11P31277 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
HOXD11P31277 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
HOXD11P31277 AC055716.2-201ENST00000552545 2441 ntBASIC8.08□□□□□ -1.12
HOXD11P31277 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
HOXD11P31277 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
HOXD11P31277 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC8.08□□□□□ -1.12
HOXD11P31277 AC006206.1-201ENST00000544842 3387 ntBASIC8.08□□□□□ -1.12
HOXD11P31277 PPP1R14D-201ENST00000299174 757 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
HOXD11P31277 Y_RNA.111-201ENST00000363248 100 ntBASIC8.08□□□□□ -1.12
HOXD11P31277 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC8.08□□□□□ -1.12
HOXD11P31277 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC8.08□□□□□ -1.12
HOXD11P31277 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC8.08□□□□□ -1.12
HOXD11P31277 DDX11L10-201ENST00000430178 571 ntBASIC8.08□□□□□ -1.12
HOXD11P31277 AL359073.1-201ENST00000448036 403 ntBASIC8.08□□□□□ -1.12
HOXD11P31277 AC013429.1-201ENST00000456604 422 ntBASIC8.08□□□□□ -1.12
HOXD11P31277 SNORA35.1-201ENST00000458908 128 ntBASIC8.08□□□□□ -1.12
HOXD11P31277 RPS27P12-201ENST00000464146 258 ntBASIC8.08□□□□□ -1.12
HOXD11P31277 AC055733.3-201ENST00000505214 523 ntBASIC8.08□□□□□ -1.12
HOXD11P31277 GLUD1P3-202ENST00000508551 200 ntBASIC8.08□□□□□ -1.12
HOXD11P31277 MIR4666B-201ENST00000578142 81 ntBASIC8.08□□□□□ -1.12
HOXD11P31277 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC8.08□□□□□ -1.12
HOXD11P31277 AL008726.1-201ENST00000607703 569 ntTSL 4 BASIC8.08□□□□□ -1.12
HOXD11P31277 uc_338.30-201ENST00000612038 168 ntBASIC8.08□□□□□ -1.12
HOXD11P31277 RNA5SP439-201ENST00000617595 124 ntBASIC8.08□□□□□ -1.12
HOXD11P31277 AC247036.7-201ENST00000639643 304 ntBASIC8.08□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 291.5 ms