Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CNGA1P29973 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CNGA1P29973 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CNGA1P29973 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CNGA1P29973 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CNGA1P29973 MIR153-1-201ENST00000384914 90 ntBASIC5.27□□□□□ -1.57
CNGA1P29973 MTCYBP36-201ENST00000404146 440 ntBASIC5.27□□□□□ -1.57
CNGA1P29973 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CNGA1P29973 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.27□□□□□ -1.57
CNGA1P29973 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC5.27□□□□□ -1.57
CNGA1P29973 AC005517.2-201ENST00000424673 553 ntBASIC5.27□□□□□ -1.57
CNGA1P29973 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CNGA1P29973 RPS29P17-201ENST00000430795 166 ntBASIC5.27□□□□□ -1.57
CNGA1P29973 AC109583.1-201ENST00000432156 268 ntBASIC5.27□□□□□ -1.57
CNGA1P29973 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5.27□□□□□ -1.57
CNGA1P29973 MTND1P28-201ENST00000435623 950 ntBASIC5.27□□□□□ -1.57
CNGA1P29973 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC5.27□□□□□ -1.57
CNGA1P29973 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC5.27□□□□□ -1.57
CNGA1P29973 AC104563.1-201ENST00000476147 376 ntBASIC5.27□□□□□ -1.57
CNGA1P29973 RPL21P103-201ENST00000479921 488 ntBASIC5.27□□□□□ -1.57
CNGA1P29973 RPL21P129-201ENST00000491732 478 ntBASIC5.27□□□□□ -1.57
CNGA1P29973 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.27□□□□□ -1.57
CNGA1P29973 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.27□□□□□ -1.57
CNGA1P29973 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC5.27□□□□□ -1.57
CNGA1P29973 HMGB3P16-201ENST00000508037 287 ntBASIC5.27□□□□□ -1.57
CNGA1P29973 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.27□□□□□ -1.57
CNGA1P29973 RNA5SP249-201ENST00000516127 99 ntBASIC5.27□□□□□ -1.57
CNGA1P29973 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC5.27□□□□□ -1.57
CNGA1P29973 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC5.27□□□□□ -1.57
CNGA1P29973 AL139174.1-201ENST00000531489 886 ntBASIC5.27□□□□□ -1.57
CNGA1P29973 CYCSP29-201ENST00000533731 318 ntBASIC5.27□□□□□ -1.57
CNGA1P29973 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC5.27□□□□□ -1.57
CNGA1P29973 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.27□□□□□ -1.57
CNGA1P29973 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.27□□□□□ -1.57
CNGA1P29973 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC5.27□□□□□ -1.57
CNGA1P29973 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5.27□□□□□ -1.57
CNGA1P29973 AC233280.2-201ENST00000603917 1070 ntBASIC5.27□□□□□ -1.57
CNGA1P29973 AL353600.1-201ENST00000608148 251 ntBASIC5.27□□□□□ -1.57
CNGA1P29973 AC099669.2-201ENST00000616549 437 ntBASIC5.27□□□□□ -1.57
CNGA1P29973 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC5.27□□□□□ -1.57
CNGA1P29973 AC008785.1-201ENST00000624475 456 ntBASIC5.27□□□□□ -1.57
CNGA1P29973 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC5.27□□□□□ -1.57
CNGA1P29973 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.27□□□□□ -1.57
CNGA1P29973 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CNGA1P29973 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CNGA1P29973 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CNGA1P29973 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CNGA1P29973 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CNGA1P29973 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CNGA1P29973 AC090229.1-201ENST00000590983 1609 ntBASIC5.26□□□□□ -1.57
CNGA1P29973 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CNGA1P29973 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CNGA1P29973 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.26□□□□□ -1.57
CNGA1P29973 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CNGA1P29973 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
CNGA1P29973 MTCO1P24-201ENST00000515438 1558 ntBASIC5.26□□□□□ -1.57
CNGA1P29973 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.26□□□□□ -1.57
CNGA1P29973 OR11H4-201ENST00000315409 1082 ntBASIC5.26□□□□□ -1.57
CNGA1P29973 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CNGA1P29973 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CNGA1P29973 RNU6-28P-201ENST00000362378 107 ntBASIC5.26□□□□□ -1.57
CNGA1P29973 AL359837.1-201ENST00000381357 287 ntBASIC5.26□□□□□ -1.57
CNGA1P29973 RN7SKP247-201ENST00000411094 308 ntBASIC5.26□□□□□ -1.57
CNGA1P29973 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC5.26□□□□□ -1.57
CNGA1P29973 RPL36AP10-201ENST00000421785 322 ntBASIC5.26□□□□□ -1.57
CNGA1P29973 RGS17P1-201ENST00000423358 553 ntBASIC5.26□□□□□ -1.57
CNGA1P29973 DLGAP5P1-201ENST00000430307 464 ntBASIC5.26□□□□□ -1.57
CNGA1P29973 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC5.26□□□□□ -1.57
CNGA1P29973 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC5.26□□□□□ -1.57
CNGA1P29973 RPS3AP54-201ENST00000435535 734 ntBASIC5.26□□□□□ -1.57
CNGA1P29973 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.26□□□□□ -1.57
CNGA1P29973 AC114755.5-201ENST00000447760 831 ntBASIC5.26□□□□□ -1.57
CNGA1P29973 AP000542.1-201ENST00000448473 371 ntBASIC5.26□□□□□ -1.57
CNGA1P29973 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.26□□□□□ -1.57
CNGA1P29973 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC5.26□□□□□ -1.57
CNGA1P29973 AP001992.1-205ENST00000462248 379 ntBASIC5.26□□□□□ -1.57
CNGA1P29973 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.26□□□□□ -1.57
CNGA1P29973 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.26□□□□□ -1.57
CNGA1P29973 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CNGA1P29973 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC5.26□□□□□ -1.57
CNGA1P29973 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC5.26□□□□□ -1.57
CNGA1P29973 AC116347.2-201ENST00000514912 523 ntBASIC5.26□□□□□ -1.57
CNGA1P29973 AC025881.1-201ENST00000518851 512 ntBASIC5.26□□□□□ -1.57
CNGA1P29973 MRPL49P2-201ENST00000521066 465 ntBASIC5.26□□□□□ -1.57
CNGA1P29973 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.26□□□□□ -1.57
CNGA1P29973 AP002963.1-201ENST00000530590 184 ntBASIC5.26□□□□□ -1.57
CNGA1P29973 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.26□□□□□ -1.57
CNGA1P29973 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.26□□□□□ -1.57
CNGA1P29973 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.26□□□□□ -1.57
CNGA1P29973 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC5.26□□□□□ -1.57
CNGA1P29973 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.26□□□□□ -1.57
CNGA1P29973 CYCSP40-201ENST00000575927 294 ntBASIC5.26□□□□□ -1.57
CNGA1P29973 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC5.26□□□□□ -1.57
CNGA1P29973 MIR3611-201ENST00000584484 83 ntBASIC5.26□□□□□ -1.57
CNGA1P29973 MIR548AB-201ENST00000584917 84 ntBASIC5.26□□□□□ -1.57
CNGA1P29973 AC103591.3-201ENST00000608684 209 ntBASIC5.26□□□□□ -1.57
CNGA1P29973 AC090425.2-201ENST00000608818 501 ntBASIC5.26□□□□□ -1.57
CNGA1P29973 AC093591.3-201ENST00000634516 308 ntBASIC5.26□□□□□ -1.57
CNGA1P29973 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.26□□□□□ -1.57
CNGA1P29973 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms