Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 SDCBPP1-201ENST00000440192 890 ntBASIC5.04□□□□□ -1.6
COL6A2P12110 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
COL6A2P12110 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.04□□□□□ -1.6
COL6A2P12110 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC5.04□□□□□ -1.6
COL6A2P12110 HMGB1P15-201ENST00000453854 435 ntBASIC5.04□□□□□ -1.6
COL6A2P12110 RAD23BP3-201ENST00000454157 1152 ntBASIC5.04□□□□□ -1.6
COL6A2P12110 snoU13.7-201ENST00000459220 104 ntBASIC5.04□□□□□ -1.6
COL6A2P12110 RPL23AP41-201ENST00000484754 458 ntBASIC5.04□□□□□ -1.6
COL6A2P12110 RPS4XP14-201ENST00000493072 781 ntBASIC5.04□□□□□ -1.6
COL6A2P12110 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.04□□□□□ -1.6
COL6A2P12110 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC5.04□□□□□ -1.6
COL6A2P12110 NPM1P41-201ENST00000512920 831 ntBASIC5.04□□□□□ -1.6
COL6A2P12110 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.04□□□□□ -1.6
COL6A2P12110 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC5.04□□□□□ -1.6
COL6A2P12110 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.04□□□□□ -1.6
COL6A2P12110 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL6A2P12110 OR5AN2P-201ENST00000534535 896 ntBASIC5.04□□□□□ -1.6
COL6A2P12110 PDCD5P1-201ENST00000543528 309 ntBASIC5.04□□□□□ -1.6
COL6A2P12110 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.04□□□□□ -1.6
COL6A2P12110 AL109766.1-201ENST00000555080 552 ntBASIC5.04□□□□□ -1.6
COL6A2P12110 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.04□□□□□ -1.6
COL6A2P12110 AC069307.1-201ENST00000602820 447 ntBASIC5.04□□□□□ -1.6
COL6A2P12110 AC087283.1-201ENST00000604029 1074 ntBASIC5.04□□□□□ -1.6
COL6A2P12110 BNIP3P10-201ENST00000605360 577 ntBASIC5.04□□□□□ -1.6
COL6A2P12110 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL6A2P12110 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.04□□□□□ -1.6
COL6A2P12110 AL136221.1-201ENST00000621449 509 ntBASIC5.04□□□□□ -1.6
COL6A2P12110 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.04□□□□□ -1.6
COL6A2P12110 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL6A2P12110 AC005332.5-201ENST00000591222 2919 ntBASIC5.04□□□□□ -1.6
COL6A2P12110 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL6A2P12110 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
COL6A2P12110 ELL2P4-201ENST00000446870 1376 ntBASIC5.04□□□□□ -1.6
COL6A2P12110 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.03□□□□□ -1.6
COL6A2P12110 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
COL6A2P12110 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
COL6A2P12110 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL6A2P12110 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.03□□□□□ -1.6
COL6A2P12110 AC090971.4-201ENST00000560291 1800 ntBASIC5.03□□□□□ -1.6
COL6A2P12110 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL6A2P12110 RNU6-1120P-201ENST00000362988 108 ntBASIC5.03□□□□□ -1.6
COL6A2P12110 SNORA67-201ENST00000384423 137 ntBASIC5.03□□□□□ -1.6
COL6A2P12110 RNU6-1011P-201ENST00000384668 107 ntBASIC5.03□□□□□ -1.6
COL6A2P12110 RNU1-77P-201ENST00000390868 162 ntBASIC5.03□□□□□ -1.6
COL6A2P12110 RNU2-21P-201ENST00000410368 188 ntBASIC5.03□□□□□ -1.6
COL6A2P12110 RNU6-603P-201ENST00000411403 107 ntBASIC5.03□□□□□ -1.6
COL6A2P12110 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.03□□□□□ -1.6
COL6A2P12110 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.03□□□□□ -1.6
COL6A2P12110 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.03□□□□□ -1.6
COL6A2P12110 RPS26P47-201ENST00000427219 348 ntBASIC5.03□□□□□ -1.6
COL6A2P12110 BRWD1P3-201ENST00000428816 390 ntBASIC5.03□□□□□ -1.6
COL6A2P12110 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.03□□□□□ -1.6
COL6A2P12110 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.03□□□□□ -1.6
COL6A2P12110 CYCSP6-201ENST00000434498 302 ntBASIC5.03□□□□□ -1.6
COL6A2P12110 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.03□□□□□ -1.6
COL6A2P12110 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.03□□□□□ -1.6
COL6A2P12110 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
COL6A2P12110 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC5.03□□□□□ -1.6
COL6A2P12110 FDX1P2-201ENST00000450769 375 ntBASIC5.03□□□□□ -1.6
COL6A2P12110 AC022364.2-201ENST00000457963 554 ntBASIC5.03□□□□□ -1.6
COL6A2P12110 MTCO2P29-201ENST00000465212 189 ntBASIC5.03□□□□□ -1.6
COL6A2P12110 AL136126.1-201ENST00000473603 402 ntBASIC5.03□□□□□ -1.6
COL6A2P12110 NIP7P2-201ENST00000485801 544 ntBASIC5.03□□□□□ -1.6
COL6A2P12110 RN7SL547P-201ENST00000490793 290 ntBASIC5.03□□□□□ -1.6
COL6A2P12110 RPL23AP72-201ENST00000492447 435 ntBASIC5.03□□□□□ -1.6
COL6A2P12110 MTCO2P30-201ENST00000503662 364 ntBASIC5.03□□□□□ -1.6
COL6A2P12110 AC093767.1-201ENST00000504523 156 ntBASIC5.03□□□□□ -1.6
COL6A2P12110 ENPP7P9-201ENST00000514456 627 ntBASIC5.03□□□□□ -1.6
COL6A2P12110 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC5.03□□□□□ -1.6
COL6A2P12110 AC027308.1-201ENST00000517993 110 ntBASIC5.03□□□□□ -1.6
COL6A2P12110 AC107934.1-201ENST00000522215 217 ntBASIC5.03□□□□□ -1.6
COL6A2P12110 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.03□□□□□ -1.6
COL6A2P12110 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
COL6A2P12110 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.03□□□□□ -1.6
COL6A2P12110 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.03□□□□□ -1.6
COL6A2P12110 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.03□□□□□ -1.6
COL6A2P12110 AL356432.3-201ENST00000568952 465 ntBASIC5.03□□□□□ -1.6
COL6A2P12110 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.03□□□□□ -1.6
COL6A2P12110 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.03□□□□□ -1.6
COL6A2P12110 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5.03□□□□□ -1.6
COL6A2P12110 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.03□□□□□ -1.6
COL6A2P12110 AL355472.4-201ENST00000610233 626 ntBASIC5.03□□□□□ -1.6
COL6A2P12110 RPSAP73-201ENST00000614820 330 ntBASIC5.03□□□□□ -1.6
COL6A2P12110 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.03□□□□□ -1.6
COL6A2P12110 MIR6826-201ENST00000617808 98 ntBASIC5.03□□□□□ -1.6
COL6A2P12110 AL596245.1-201ENST00000618994 362 ntBASIC5.03□□□□□ -1.6
COL6A2P12110 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC5.03□□□□□ -1.6
COL6A2P12110 AC006504.8-201ENST00000621046 635 ntBASIC5.03□□□□□ -1.6
COL6A2P12110 AL049767.1-202ENST00000637826 242 ntBASIC5.03□□□□□ -1.6
COL6A2P12110 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC5.03□□□□□ -1.6
COL6A2P12110 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
COL6A2P12110 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
COL6A2P12110 AP001273.1-201ENST00000624493 3152 ntBASIC5.03□□□□□ -1.6
COL6A2P12110 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
COL6A2P12110 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.03□□□□□ -1.6
COL6A2P12110 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COL6A2P12110 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
COL6A2P12110 NMD3P1-201ENST00000439704 1488 ntBASIC5.02□□□□□ -1.61
COL6A2P12110 MTND5P17-201ENST00000418405 1603 ntBASIC5.02□□□□□ -1.61
COL6A2P12110 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms