Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AL450489.1-201ENST00000612071 468 ntBASIC3.83□□□□□ -1.8
TOP1P11387 AC005156.1-201ENST00000613371 573 ntBASIC3.83□□□□□ -1.8
TOP1P11387 AL157817.1-201ENST00000614264 790 ntBASIC3.83□□□□□ -1.8
TOP1P11387 AC006213.5-201ENST00000619673 288 ntBASIC3.83□□□□□ -1.8
TOP1P11387 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.83□□□□□ -1.8
TOP1P11387 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.83□□□□□ -1.8
TOP1P11387 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TOP1P11387 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.83□□□□□ -1.8
TOP1P11387 AC024341.1-201ENST00000526444 1552 ntBASIC3.83□□□□□ -1.8
TOP1P11387 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TOP1P11387 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
TOP1P11387 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
TOP1P11387 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.82□□□□□ -1.8
TOP1P11387 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.82□□□□□ -1.8
TOP1P11387 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TOP1P11387 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
TOP1P11387 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.82□□□□□ -1.8
TOP1P11387 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
TOP1P11387 RNU6-1243P-201ENST00000364028 107 ntBASIC3.82□□□□□ -1.8
TOP1P11387 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TOP1P11387 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
TOP1P11387 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.82□□□□□ -1.8
TOP1P11387 SNORA51.12-201ENST00000384448 134 ntBASIC3.82□□□□□ -1.8
TOP1P11387 RNU2-17P-201ENST00000410290 190 ntBASIC3.82□□□□□ -1.8
TOP1P11387 RNU2-71P-201ENST00000411395 189 ntBASIC3.82□□□□□ -1.8
TOP1P11387 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.82□□□□□ -1.8
TOP1P11387 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.82□□□□□ -1.8
TOP1P11387 HMGN2P16-201ENST00000456802 261 ntBASIC3.82□□□□□ -1.8
TOP1P11387 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.82□□□□□ -1.8
TOP1P11387 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.82□□□□□ -1.8
TOP1P11387 PHBP14-201ENST00000512887 367 ntBASIC3.82□□□□□ -1.8
TOP1P11387 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.82□□□□□ -1.8
TOP1P11387 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.82□□□□□ -1.8
TOP1P11387 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.82□□□□□ -1.8
TOP1P11387 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.82□□□□□ -1.8
TOP1P11387 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.82□□□□□ -1.8
TOP1P11387 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.82□□□□□ -1.8
TOP1P11387 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.82□□□□□ -1.8
TOP1P11387 SYF2P1-201ENST00000550658 413 ntBASIC3.82□□□□□ -1.8
TOP1P11387 AC017100.2-201ENST00000584628 355 ntBASIC3.82□□□□□ -1.8
TOP1P11387 KATNBL1P1-201ENST00000605192 748 ntBASIC3.82□□□□□ -1.8
TOP1P11387 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.82□□□□□ -1.8
TOP1P11387 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
TOP1P11387 AC073592.7-201ENST00000623659 507 ntBASIC3.82□□□□□ -1.8
TOP1P11387 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TOP1P11387 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TOP1P11387 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
TOP1P11387 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TOP1P11387 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
TOP1P11387 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TOP1P11387 RNU6-40P-201ENST00000384254 107 ntBASIC3.81□□□□□ -1.8
TOP1P11387 MIR491-201ENST00000384877 84 ntBASIC3.81□□□□□ -1.8
TOP1P11387 EI24P2-201ENST00000397776 1076 ntBASIC3.81□□□□□ -1.8
TOP1P11387 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.81□□□□□ -1.8
TOP1P11387 RNA5SP229-201ENST00000410809 99 ntBASIC3.81□□□□□ -1.8
TOP1P11387 RNU4-47P-201ENST00000410876 114 ntBASIC3.81□□□□□ -1.8
TOP1P11387 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.81□□□□□ -1.8
TOP1P11387 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.81□□□□□ -1.8
TOP1P11387 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.81□□□□□ -1.8
TOP1P11387 AC245291.1-201ENST00000419501 328 ntBASIC3.81□□□□□ -1.8
TOP1P11387 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.81□□□□□ -1.8
TOP1P11387 RPL23AP83-201ENST00000434984 473 ntBASIC3.81□□□□□ -1.8
TOP1P11387 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.81□□□□□ -1.8
TOP1P11387 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.81□□□□□ -1.8
TOP1P11387 AC089999.1-201ENST00000460336 374 ntBASIC3.81□□□□□ -1.8
TOP1P11387 RN7SL330P-201ENST00000469709 307 ntBASIC3.81□□□□□ -1.8
TOP1P11387 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.81□□□□□ -1.8
TOP1P11387 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.81□□□□□ -1.8
TOP1P11387 RPL23AP55-201ENST00000498163 452 ntBASIC3.81□□□□□ -1.8
TOP1P11387 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.81□□□□□ -1.8
TOP1P11387 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.81□□□□□ -1.8
TOP1P11387 RN7SKP289-201ENST00000517244 295 ntBASIC3.81□□□□□ -1.8
TOP1P11387 RN7SKP57-201ENST00000517248 293 ntBASIC3.81□□□□□ -1.8
TOP1P11387 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.81□□□□□ -1.8
TOP1P11387 AC087272.1-201ENST00000523624 533 ntBASIC3.81□□□□□ -1.8
TOP1P11387 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.81□□□□□ -1.8
TOP1P11387 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.81□□□□□ -1.8
TOP1P11387 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
TOP1P11387 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
TOP1P11387 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.81□□□□□ -1.8
TOP1P11387 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
TOP1P11387 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
TOP1P11387 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.8□□□□□ -1.8
TOP1P11387 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.8□□□□□ -1.8
TOP1P11387 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
TOP1P11387 AC046144.1-201ENST00000478559 1853 ntBASIC3.8□□□□□ -1.8
TOP1P11387 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
TOP1P11387 RNU6-805P-201ENST00000365643 106 ntBASIC3.8□□□□□ -1.8
TOP1P11387 AL049610.1-201ENST00000423374 372 ntBASIC3.8□□□□□ -1.8
TOP1P11387 AL513175.1-201ENST00000431492 780 ntBASIC3.8□□□□□ -1.8
TOP1P11387 MRPL35P4-201ENST00000453682 566 ntBASIC3.8□□□□□ -1.8
TOP1P11387 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.8□□□□□ -1.8
TOP1P11387 AC109925.1-201ENST00000478069 331 ntBASIC3.8□□□□□ -1.8
TOP1P11387 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.8□□□□□ -1.8
TOP1P11387 RN7SL504P-201ENST00000494496 287 ntBASIC3.8□□□□□ -1.8
TOP1P11387 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.8□□□□□ -1.8
TOP1P11387 AC026427.2-201ENST00000506228 536 ntBASIC3.8□□□□□ -1.8
TOP1P11387 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.8□□□□□ -1.8
TOP1P11387 SNORA64.4-201ENST00000516632 81 ntBASIC3.8□□□□□ -1.8
TOP1P11387 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms