Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC5.87□□□□□ -1.47
RARAP10276 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.87□□□□□ -1.47
RARAP10276 MIR4703-201ENST00000577728 79 ntBASIC5.87□□□□□ -1.47
RARAP10276 MIR5690-201ENST00000583739 73 ntBASIC5.87□□□□□ -1.47
RARAP10276 AC113194.1-201ENST00000606037 500 ntBASIC5.87□□□□□ -1.47
RARAP10276 AC010424.2-201ENST00000607594 443 ntBASIC5.87□□□□□ -1.47
RARAP10276 AL139124.1-201ENST00000609123 421 ntBASIC5.87□□□□□ -1.47
RARAP10276 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.87□□□□□ -1.47
RARAP10276 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.87□□□□□ -1.47
RARAP10276 AC083806.3-201ENST00000614016 455 ntBASIC5.87□□□□□ -1.47
RARAP10276 uc_338.34-201ENST00000617467 174 ntBASIC5.87□□□□□ -1.47
RARAP10276 AP005431.1-201ENST00000618479 319 ntBASIC5.87□□□□□ -1.47
RARAP10276 OR52H1-202ENST00000641796 1061 ntBASIC5.87□□□□□ -1.47
RARAP10276 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.87□□□□□ -1.47
RARAP10276 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
RARAP10276 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.87□□□□□ -1.47
RARAP10276 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.87□□□□□ -1.47
RARAP10276 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
RARAP10276 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.87□□□□□ -1.47
RARAP10276 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.87□□□□□ -1.47
RARAP10276 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.87□□□□□ -1.47
RARAP10276 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RARAP10276 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RARAP10276 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RARAP10276 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
RARAP10276 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RARAP10276 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RARAP10276 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.86□□□□□ -1.47
RARAP10276 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RARAP10276 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
RARAP10276 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.86□□□□□ -1.47
RARAP10276 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RARAP10276 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.86□□□□□ -1.47
RARAP10276 OR52B3P-201ENST00000314715 928 ntBASIC5.86□□□□□ -1.47
RARAP10276 RNA5SP258-201ENST00000362750 119 ntBASIC5.86□□□□□ -1.47
RARAP10276 Y_RNA.188-201ENST00000363952 111 ntBASIC5.86□□□□□ -1.47
RARAP10276 U3.11-201ENST00000364476 212 ntBASIC5.86□□□□□ -1.47
RARAP10276 RPS4XP9-201ENST00000405151 780 ntBASIC5.86□□□□□ -1.47
RARAP10276 MIR1302-3-201ENST00000408128 138 ntBASIC5.86□□□□□ -1.47
RARAP10276 GPS2P1-201ENST00000411761 986 ntBASIC5.86□□□□□ -1.47
RARAP10276 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.86□□□□□ -1.47
RARAP10276 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.86□□□□□ -1.47
RARAP10276 AF228730.2-201ENST00000438784 848 ntBASIC5.86□□□□□ -1.47
RARAP10276 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.86□□□□□ -1.47
RARAP10276 RPS26P56-201ENST00000444468 240 ntBASIC5.86□□□□□ -1.47
RARAP10276 AL035666.1-201ENST00000446195 348 ntBASIC5.86□□□□□ -1.47
RARAP10276 AL596266.1-201ENST00000448132 400 ntBASIC5.86□□□□□ -1.47
RARAP10276 CECR9-201ENST00000453421 199 ntBASIC5.86□□□□□ -1.47
RARAP10276 AC104308.1-201ENST00000454621 333 ntBASIC5.86□□□□□ -1.47
RARAP10276 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC5.86□□□□□ -1.47
RARAP10276 AC021382.1-201ENST00000483523 359 ntBASIC5.86□□□□□ -1.47
RARAP10276 Y_RNA.654-201ENST00000497848 106 ntBASIC5.86□□□□□ -1.47
RARAP10276 TRBVA-201ENST00000498804 316 ntBASIC5.86□□□□□ -1.47
RARAP10276 AC020893.1-201ENST00000502452 580 ntBASIC5.86□□□□□ -1.47
RARAP10276 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RARAP10276 AC017037.2-201ENST00000513850 890 ntBASIC5.86□□□□□ -1.47
RARAP10276 RNU6-976P-201ENST00000516086 111 ntBASIC5.86□□□□□ -1.47
RARAP10276 HMGB1P19-201ENST00000517578 577 ntBASIC5.86□□□□□ -1.47
RARAP10276 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC5.86□□□□□ -1.47
RARAP10276 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC5.86□□□□□ -1.47
RARAP10276 AL670379.11-201ENST00000604059 253 ntBASIC5.86□□□□□ -1.47
RARAP10276 AL670379.10-201ENST00000604330 253 ntBASIC5.86□□□□□ -1.47
RARAP10276 NUTF2P8-201ENST00000604593 363 ntBASIC5.86□□□□□ -1.47
RARAP10276 AL670379.12-201ENST00000605291 253 ntBASIC5.86□□□□□ -1.47
RARAP10276 AL670379.9-201ENST00000605428 253 ntBASIC5.86□□□□□ -1.47
RARAP10276 AL355816.1-201ENST00000607951 118 ntBASIC5.86□□□□□ -1.47
RARAP10276 AL031666.3-201ENST00000609320 1006 ntBASIC5.86□□□□□ -1.47
RARAP10276 AC010632.3-201ENST00000611377 369 ntBASIC5.86□□□□□ -1.47
RARAP10276 AC245517.5-201ENST00000611529 162 ntBASIC5.86□□□□□ -1.47
RARAP10276 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.86□□□□□ -1.47
RARAP10276 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
RARAP10276 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.86□□□□□ -1.47
RARAP10276 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RARAP10276 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
RARAP10276 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RARAP10276 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RARAP10276 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RARAP10276 AC090337.1-201ENST00000579651 2074 ntBASIC5.86□□□□□ -1.47
RARAP10276 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RARAP10276 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RARAP10276 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RARAP10276 AC121333.1-201ENST00000567488 2709 ntBASIC5.85□□□□□ -1.47
RARAP10276 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RARAP10276 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.85□□□□□ -1.47
RARAP10276 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RARAP10276 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
RARAP10276 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
RARAP10276 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RARAP10276 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RARAP10276 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
RARAP10276 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RARAP10276 MIR375-201ENST00000362103 64 ntBASIC5.85□□□□□ -1.47
RARAP10276 Y_RNA.47-201ENST00000362697 108 ntBASIC5.85□□□□□ -1.47
RARAP10276 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RARAP10276 HMGB1P20-201ENST00000402555 677 ntBASIC5.85□□□□□ -1.47
RARAP10276 SSXP10-201ENST00000402595 565 ntBASIC5.85□□□□□ -1.47
RARAP10276 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.85□□□□□ -1.47
RARAP10276 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
RARAP10276 RPSAP35-201ENST00000413753 818 ntBASIC5.85□□□□□ -1.47
RARAP10276 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms