Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 AC024589.1-201ENST00000512207 263 ntBASIC5.28□□□□□ -1.56
HMGB1P09429 SNORA70.16-201ENST00000516390 95 ntBASIC5.28□□□□□ -1.56
HMGB1P09429 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC5.28□□□□□ -1.56
HMGB1P09429 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HMGB1P09429 AC125611.2-201ENST00000551907 647 ntBASIC5.28□□□□□ -1.56
HMGB1P09429 AL163153.1-201ENST00000554223 283 ntBASIC5.28□□□□□ -1.56
HMGB1P09429 RPL23AP97-201ENST00000568955 471 ntBASIC5.28□□□□□ -1.56
HMGB1P09429 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.28□□□□□ -1.56
HMGB1P09429 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC5.28□□□□□ -1.56
HMGB1P09429 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.28□□□□□ -1.56
HMGB1P09429 AL592221.1-201ENST00000605266 382 ntBASIC5.28□□□□□ -1.56
HMGB1P09429 AL158211.4-201ENST00000606988 584 ntBASIC5.28□□□□□ -1.56
HMGB1P09429 AC091979.2-201ENST00000607514 214 ntBASIC5.28□□□□□ -1.56
HMGB1P09429 AL450472.3-201ENST00000615578 367 ntBASIC5.28□□□□□ -1.56
HMGB1P09429 AP005019.3-201ENST00000620418 560 ntBASIC5.28□□□□□ -1.56
HMGB1P09429 AC007546.2-201ENST00000623996 360 ntBASIC5.28□□□□□ -1.56
HMGB1P09429 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC5.28□□□□□ -1.56
HMGB1P09429 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.28□□□□□ -1.56
HMGB1P09429 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HMGB1P09429 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.28□□□□□ -1.56
HMGB1P09429 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
HMGB1P09429 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HMGB1P09429 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.28□□□□□ -1.56
HMGB1P09429 DDX43P2-201ENST00000604753 1354 ntBASIC5.28□□□□□ -1.56
HMGB1P09429 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
HMGB1P09429 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HMGB1P09429 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC5.27□□□□□ -1.57
HMGB1P09429 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HMGB1P09429 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HMGB1P09429 RNU6-83P-201ENST00000384568 112 ntBASIC5.27□□□□□ -1.57
HMGB1P09429 AL160275.2-201ENST00000412010 394 ntBASIC5.27□□□□□ -1.57
HMGB1P09429 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.27□□□□□ -1.57
HMGB1P09429 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC5.27□□□□□ -1.57
HMGB1P09429 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC5.27□□□□□ -1.57
HMGB1P09429 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.27□□□□□ -1.57
HMGB1P09429 USP9YP10-201ENST00000454868 628 ntBASIC5.27□□□□□ -1.57
HMGB1P09429 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
HMGB1P09429 HMGB1P36-201ENST00000487709 576 ntBASIC5.27□□□□□ -1.57
HMGB1P09429 AHI1-208ENST00000488690 712 ntTSL 5 BASIC5.27□□□□□ -1.57
HMGB1P09429 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.27□□□□□ -1.57
HMGB1P09429 AL592156.1-201ENST00000508758 304 ntBASIC5.27□□□□□ -1.57
HMGB1P09429 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.27□□□□□ -1.57
HMGB1P09429 MTCYBP43-201ENST00000513621 740 ntBASIC5.27□□□□□ -1.57
HMGB1P09429 AC026801.2-201ENST00000515352 425 ntBASIC5.27□□□□□ -1.57
HMGB1P09429 AP006289.1-201ENST00000538089 277 ntBASIC5.27□□□□□ -1.57
HMGB1P09429 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.27□□□□□ -1.57
HMGB1P09429 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC5.27□□□□□ -1.57
HMGB1P09429 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC5.27□□□□□ -1.57
HMGB1P09429 AC092106.3-201ENST00000611308 722 ntBASIC5.27□□□□□ -1.57
HMGB1P09429 MIR6891-201ENST00000618788 93 ntBASIC5.27□□□□□ -1.57
HMGB1P09429 AC002550.2-201ENST00000621246 394 ntBASIC5.27□□□□□ -1.57
HMGB1P09429 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.27□□□□□ -1.57
HMGB1P09429 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
HMGB1P09429 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
HMGB1P09429 OR56B2P-202ENST00000641377 2453 ntBASIC5.26□□□□□ -1.57
HMGB1P09429 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HMGB1P09429 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.26□□□□□ -1.57
HMGB1P09429 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.26□□□□□ -1.57
HMGB1P09429 FAM133CP-201ENST00000332869 704 ntBASIC5.26□□□□□ -1.57
HMGB1P09429 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HMGB1P09429 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HMGB1P09429 MIR3065-201ENST00000390137 79 ntBASIC5.26□□□□□ -1.57
HMGB1P09429 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HMGB1P09429 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.26□□□□□ -1.57
HMGB1P09429 FAT1P1-201ENST00000406588 507 ntBASIC5.26□□□□□ -1.57
HMGB1P09429 AL590139.1-201ENST00000416267 400 ntBASIC5.26□□□□□ -1.57
HMGB1P09429 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC5.26□□□□□ -1.57
HMGB1P09429 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.26□□□□□ -1.57
HMGB1P09429 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.26□□□□□ -1.57
HMGB1P09429 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.26□□□□□ -1.57
HMGB1P09429 AC114495.1-201ENST00000441274 436 ntBASIC5.26□□□□□ -1.57
HMGB1P09429 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC5.26□□□□□ -1.57
HMGB1P09429 SBDSP1-204ENST00000453858 737 ntBASIC5.26□□□□□ -1.57
HMGB1P09429 AC007967.1-201ENST00000455422 1159 ntBASIC5.26□□□□□ -1.57
HMGB1P09429 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.26□□□□□ -1.57
HMGB1P09429 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.26□□□□□ -1.57
HMGB1P09429 RN7SL812P-201ENST00000493791 279 ntBASIC5.26□□□□□ -1.57
HMGB1P09429 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC5.26□□□□□ -1.57
HMGB1P09429 AC022483.1-201ENST00000514020 567 ntBASIC5.26□□□□□ -1.57
HMGB1P09429 AC239860.2-201ENST00000525886 270 ntBASIC5.26□□□□□ -1.57
HMGB1P09429 AC100770.1-201ENST00000532310 322 ntBASIC5.26□□□□□ -1.57
HMGB1P09429 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.26□□□□□ -1.57
HMGB1P09429 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC5.26□□□□□ -1.57
HMGB1P09429 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC5.26□□□□□ -1.57
HMGB1P09429 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC5.26□□□□□ -1.57
HMGB1P09429 AC061975.8-201ENST00000587058 721 ntBASIC5.26□□□□□ -1.57
HMGB1P09429 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC5.26□□□□□ -1.57
HMGB1P09429 AC068790.5-201ENST00000602741 355 ntBASIC5.26□□□□□ -1.57
HMGB1P09429 AC112220.3-201ENST00000605502 502 ntBASIC5.26□□□□□ -1.57
HMGB1P09429 Mico1.1-201ENST00000611698 204 ntBASIC5.26□□□□□ -1.57
HMGB1P09429 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.26□□□□□ -1.57
HMGB1P09429 MIR6730-201ENST00000622213 67 ntBASIC5.26□□□□□ -1.57
HMGB1P09429 AP002782.1-201ENST00000623107 614 ntBASIC5.26□□□□□ -1.57
HMGB1P09429 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
HMGB1P09429 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
HMGB1P09429 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC5.26□□□□□ -1.57
HMGB1P09429 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.26□□□□□ -1.57
HMGB1P09429 AC092326.2-201ENST00000624772 1561 ntBASIC5.25□□□□□ -1.57
HMGB1P09429 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HMGB1P09429 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms