Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC124283.4-201ENST00000581815 456 ntBASIC2.95□□□□□ -1.94
HLA-DPB1P04440 AC017100.2-201ENST00000584628 355 ntBASIC2.95□□□□□ -1.94
HLA-DPB1P04440 AC099778.2-201ENST00000610904 211 ntBASIC2.95□□□□□ -1.94
HLA-DPB1P04440 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.95□□□□□ -1.94
HLA-DPB1P04440 C2orf27A-204ENST00000623058 969 ntBASIC2.95□□□□□ -1.94
HLA-DPB1P04440 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.95□□□□□ -1.94
HLA-DPB1P04440 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC2.95□□□□□ -1.94
HLA-DPB1P04440 AL356274.2-201ENST00000624379 3752 ntBASIC2.95□□□□□ -1.94
HLA-DPB1P04440 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DPB1P04440 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DPB1P04440 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
HLA-DPB1P04440 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HLA-DPB1P04440 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.94□□□□□ -1.94
HLA-DPB1P04440 AC073055.1-201ENST00000456901 1621 ntBASIC2.94□□□□□ -1.94
HLA-DPB1P04440 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.94□□□□□ -1.94
HLA-DPB1P04440 AC008264.2-201ENST00000610193 3731 ntBASIC2.94□□□□□ -1.94
HLA-DPB1P04440 SNORA51.4-201ENST00000364993 124 ntBASIC2.94□□□□□ -1.94
HLA-DPB1P04440 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.94□□□□□ -1.94
HLA-DPB1P04440 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
HLA-DPB1P04440 SNORD17-201ENST00000390930 237 ntBASIC2.94□□□□□ -1.94
HLA-DPB1P04440 AP002784.2-201ENST00000397300 549 ntBASIC2.94□□□□□ -1.94
HLA-DPB1P04440 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.94□□□□□ -1.94
HLA-DPB1P04440 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.94□□□□□ -1.94
HLA-DPB1P04440 RN7SKP111-201ENST00000410349 271 ntBASIC2.94□□□□□ -1.94
HLA-DPB1P04440 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC2.94□□□□□ -1.94
HLA-DPB1P04440 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC2.94□□□□□ -1.94
HLA-DPB1P04440 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC2.94□□□□□ -1.94
HLA-DPB1P04440 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC2.94□□□□□ -1.94
HLA-DPB1P04440 CKS1BP5-201ENST00000434172 273 ntBASIC2.94□□□□□ -1.94
HLA-DPB1P04440 AC244505.4-201ENST00000434905 287 ntBASIC2.94□□□□□ -1.94
HLA-DPB1P04440 SSXP5-201ENST00000443473 287 ntBASIC2.94□□□□□ -1.94
HLA-DPB1P04440 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.94□□□□□ -1.94
HLA-DPB1P04440 HMGN2P21-201ENST00000447764 270 ntBASIC2.94□□□□□ -1.94
HLA-DPB1P04440 RPL26P28-201ENST00000451325 435 ntBASIC2.94□□□□□ -1.94
HLA-DPB1P04440 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.94□□□□□ -1.94
HLA-DPB1P04440 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC2.94□□□□□ -1.94
HLA-DPB1P04440 RN7SKP116-201ENST00000516902 319 ntBASIC2.94□□□□□ -1.94
HLA-DPB1P04440 SOD1P3-201ENST00000518682 454 ntBASIC2.94□□□□□ -1.94
HLA-DPB1P04440 HIGD1AP6-201ENST00000521833 279 ntBASIC2.94□□□□□ -1.94
HLA-DPB1P04440 OR8L1P-201ENST00000534005 955 ntBASIC2.94□□□□□ -1.94
HLA-DPB1P04440 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HLA-DPB1P04440 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.94□□□□□ -1.94
HLA-DPB1P04440 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.94□□□□□ -1.94
HLA-DPB1P04440 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.94□□□□□ -1.94
HLA-DPB1P04440 MTCYBP28-201ENST00000566728 1132 ntBASIC2.94□□□□□ -1.94
HLA-DPB1P04440 MTCO1P40-201ENST00000574371 625 ntBASIC2.94□□□□□ -1.94
HLA-DPB1P04440 HSPE1P14-201ENST00000605812 302 ntBASIC2.94□□□□□ -1.94
HLA-DPB1P04440 HMGN2P28-201ENST00000606102 262 ntBASIC2.94□□□□□ -1.94
HLA-DPB1P04440 SNORA51-201ENST00000606420 132 ntBASIC2.94□□□□□ -1.94
HLA-DPB1P04440 U3.45-201ENST00000607547 219 ntBASIC2.94□□□□□ -1.94
HLA-DPB1P04440 uc_338.1-201ENST00000612113 180 ntBASIC2.94□□□□□ -1.94
HLA-DPB1P04440 AC121761.2-201ENST00000617300 689 ntBASIC2.94□□□□□ -1.94
HLA-DPB1P04440 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.94□□□□□ -1.94
HLA-DPB1P04440 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.94□□□□□ -1.94
HLA-DPB1P04440 AL356321.1-201ENST00000621360 228 ntBASIC2.94□□□□□ -1.94
HLA-DPB1P04440 AC004943.3-201ENST00000624116 600 ntBASIC2.94□□□□□ -1.94
HLA-DPB1P04440 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.94□□□□□ -1.94
HLA-DPB1P04440 AC244258.1-201ENST00000637553 1071 ntBASIC2.94□□□□□ -1.94
HLA-DPB1P04440 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.94□□□□□ -1.94
HLA-DPB1P04440 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
HLA-DPB1P04440 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HLA-DPB1P04440 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
HLA-DPB1P04440 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HLA-DPB1P04440 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
HLA-DPB1P04440 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
HLA-DPB1P04440 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HLA-DPB1P04440 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HLA-DPB1P04440 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.93□□□□□ -1.94
HLA-DPB1P04440 MTND5P19-201ENST00000424872 1794 ntBASIC2.93□□□□□ -1.94
HLA-DPB1P04440 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
HLA-DPB1P04440 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
HLA-DPB1P04440 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.93□□□□□ -1.94
HLA-DPB1P04440 SNORA46-201ENST00000384762 135 ntBASIC2.93□□□□□ -1.94
HLA-DPB1P04440 SNORA40.4-201ENST00000390971 128 ntBASIC2.93□□□□□ -1.94
HLA-DPB1P04440 RNU6-932P-201ENST00000391108 106 ntBASIC2.93□□□□□ -1.94
HLA-DPB1P04440 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.93□□□□□ -1.94
HLA-DPB1P04440 RN7SKP58-201ENST00000411010 305 ntBASIC2.93□□□□□ -1.94
HLA-DPB1P04440 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC2.93□□□□□ -1.94
HLA-DPB1P04440 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.93□□□□□ -1.94
HLA-DPB1P04440 AC009237.2-201ENST00000421358 284 ntBASIC2.93□□□□□ -1.94
HLA-DPB1P04440 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC2.93□□□□□ -1.94
HLA-DPB1P04440 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC2.93□□□□□ -1.94
HLA-DPB1P04440 UBE2V1P1-201ENST00000430836 445 ntBASIC2.93□□□□□ -1.94
HLA-DPB1P04440 UBE2V1P6-201ENST00000430840 422 ntBASIC2.93□□□□□ -1.94
HLA-DPB1P04440 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
HLA-DPB1P04440 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HLA-DPB1P04440 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC2.93□□□□□ -1.94
HLA-DPB1P04440 AC092641.1-201ENST00000440229 772 ntBASIC2.93□□□□□ -1.94
HLA-DPB1P04440 RPL23AP33-201ENST00000442301 452 ntBASIC2.93□□□□□ -1.94
HLA-DPB1P04440 AC239367.2-201ENST00000447309 705 ntBASIC2.93□□□□□ -1.94
HLA-DPB1P04440 RPL29P29-201ENST00000448725 423 ntBASIC2.93□□□□□ -1.94
HLA-DPB1P04440 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC2.93□□□□□ -1.94
HLA-DPB1P04440 UQCRHP3-201ENST00000451503 251 ntBASIC2.93□□□□□ -1.94
HLA-DPB1P04440 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC2.93□□□□□ -1.94
HLA-DPB1P04440 CDC42P1-201ENST00000456658 548 ntBASIC2.93□□□□□ -1.94
HLA-DPB1P04440 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC2.93□□□□□ -1.94
HLA-DPB1P04440 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HLA-DPB1P04440 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.93□□□□□ -1.94
HLA-DPB1P04440 SNX5P1-201ENST00000505757 1041 ntBASIC2.93□□□□□ -1.94
HLA-DPB1P04440 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms