Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
COL2A1P02458 RN7SKP56-201ENST00000410513 331 ntBASIC3.87□□□□□ -1.79
COL2A1P02458 AC126124.2-201ENST00000413542 321 ntBASIC3.87□□□□□ -1.79
COL2A1P02458 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
COL2A1P02458 ARL2BPP3-201ENST00000421226 480 ntBASIC3.87□□□□□ -1.79
COL2A1P02458 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.87□□□□□ -1.79
COL2A1P02458 CR769776.1-201ENST00000441254 787 ntBASIC3.87□□□□□ -1.79
COL2A1P02458 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.87□□□□□ -1.79
COL2A1P02458 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.87□□□□□ -1.79
COL2A1P02458 AL031313.1-201ENST00000448435 256 ntBASIC3.87□□□□□ -1.79
COL2A1P02458 AP002345.1-201ENST00000456493 928 ntBASIC3.87□□□□□ -1.79
COL2A1P02458 CABYRP1-201ENST00000465493 1045 ntBASIC3.87□□□□□ -1.79
COL2A1P02458 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
COL2A1P02458 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.87□□□□□ -1.79
COL2A1P02458 AC004263.1-201ENST00000479327 332 ntBASIC3.87□□□□□ -1.79
COL2A1P02458 RPS3AP43-201ENST00000479743 781 ntBASIC3.87□□□□□ -1.79
COL2A1P02458 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.87□□□□□ -1.79
COL2A1P02458 RPS26P24-201ENST00000497656 331 ntBASIC3.87□□□□□ -1.79
COL2A1P02458 AC107401.1-201ENST00000503426 685 ntBASIC3.87□□□□□ -1.79
COL2A1P02458 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
COL2A1P02458 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.87□□□□□ -1.79
COL2A1P02458 AC090888.1-201ENST00000561335 1141 ntBASIC3.87□□□□□ -1.79
COL2A1P02458 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.87□□□□□ -1.79
COL2A1P02458 MIR2682-201ENST00000580305 110 ntBASIC3.87□□□□□ -1.79
COL2A1P02458 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.87□□□□□ -1.79
COL2A1P02458 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.87□□□□□ -1.79
COL2A1P02458 BDH2P1-201ENST00000602288 736 ntBASIC3.87□□□□□ -1.79
COL2A1P02458 HMGB1P50-201ENST00000605814 607 ntBASIC3.87□□□□□ -1.79
COL2A1P02458 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.87□□□□□ -1.79
COL2A1P02458 AC138932.5-201ENST00000617759 563 ntBASIC3.87□□□□□ -1.79
COL2A1P02458 RMST_9.1-201ENST00000619945 193 ntBASIC3.87□□□□□ -1.79
COL2A1P02458 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.87□□□□□ -1.79
COL2A1P02458 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.87□□□□□ -1.79
COL2A1P02458 BMS1P21-201ENST00000634565 365 ntBASIC3.87□□□□□ -1.79
COL2A1P02458 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
COL2A1P02458 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
COL2A1P02458 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.87□□□□□ -1.79
COL2A1P02458 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
COL2A1P02458 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
COL2A1P02458 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
COL2A1P02458 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
COL2A1P02458 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
COL2A1P02458 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
COL2A1P02458 SNORA48.8-201ENST00000391324 134 ntBASIC3.86□□□□□ -1.79
COL2A1P02458 AL136116.1-201ENST00000403591 381 ntBASIC3.86□□□□□ -1.79
COL2A1P02458 AL138880.1-201ENST00000405824 642 ntBASIC3.86□□□□□ -1.79
COL2A1P02458 Y_RNA.619-201ENST00000410951 90 ntBASIC3.86□□□□□ -1.79
COL2A1P02458 BTF3L4P1-201ENST00000413813 468 ntBASIC3.86□□□□□ -1.79
COL2A1P02458 AC241520.1-201ENST00000422654 1099 ntBASIC3.86□□□□□ -1.79
COL2A1P02458 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.86□□□□□ -1.79
COL2A1P02458 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.86□□□□□ -1.79
COL2A1P02458 UBE2D3P4-201ENST00000441973 436 ntBASIC3.86□□□□□ -1.79
COL2A1P02458 MTCO2P7-201ENST00000446518 666 ntBASIC3.86□□□□□ -1.79
COL2A1P02458 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.86□□□□□ -1.79
COL2A1P02458 MTND2P19-201ENST00000449129 1012 ntBASIC3.86□□□□□ -1.79
COL2A1P02458 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.86□□□□□ -1.79
COL2A1P02458 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.86□□□□□ -1.79
COL2A1P02458 MTCO3P16-201ENST00000454456 754 ntBASIC3.86□□□□□ -1.79
COL2A1P02458 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.86□□□□□ -1.79
COL2A1P02458 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.86□□□□□ -1.79
COL2A1P02458 RAP1BP2-201ENST00000478270 544 ntBASIC3.86□□□□□ -1.79
COL2A1P02458 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.86□□□□□ -1.79
COL2A1P02458 OR5H3P-201ENST00000502817 919 ntBASIC3.86□□□□□ -1.79
COL2A1P02458 AC008427.1-201ENST00000503102 655 ntBASIC3.86□□□□□ -1.79
COL2A1P02458 MTCYBP16-201ENST00000509187 1129 ntBASIC3.86□□□□□ -1.79
COL2A1P02458 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.86□□□□□ -1.79
COL2A1P02458 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.86□□□□□ -1.79
COL2A1P02458 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.86□□□□□ -1.79
COL2A1P02458 AC099489.2-201ENST00000574976 260 ntBASIC3.86□□□□□ -1.79
COL2A1P02458 MIR3162-201ENST00000581818 82 ntBASIC3.86□□□□□ -1.79
COL2A1P02458 FAM60CP-201ENST00000591086 664 ntBASIC3.86□□□□□ -1.79
COL2A1P02458 DEFB131E-202ENST00000602581 683 ntBASIC3.86□□□□□ -1.79
COL2A1P02458 AC136601.2-201ENST00000604356 474 ntBASIC3.86□□□□□ -1.79
COL2A1P02458 BNIP3P10-201ENST00000605360 577 ntBASIC3.86□□□□□ -1.79
COL2A1P02458 AC067838.1-201ENST00000606064 577 ntBASIC3.86□□□□□ -1.79
COL2A1P02458 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.86□□□□□ -1.79
COL2A1P02458 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
COL2A1P02458 AC073869.7-201ENST00000640874 297 ntBASIC3.86□□□□□ -1.79
COL2A1P02458 FAM35DP-201ENST00000323387 2712 ntBASIC3.86□□□□□ -1.79
COL2A1P02458 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
COL2A1P02458 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
COL2A1P02458 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
COL2A1P02458 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
COL2A1P02458 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
COL2A1P02458 MIR449A-201ENST00000362113 91 ntBASIC3.86□□□□□ -1.79
COL2A1P02458 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.86□□□□□ -1.79
COL2A1P02458 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.86□□□□□ -1.79
COL2A1P02458 HMGB3P18-201ENST00000406327 590 ntBASIC3.86□□□□□ -1.79
COL2A1P02458 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.86□□□□□ -1.79
COL2A1P02458 MTCO3P5-201ENST00000433620 714 ntBASIC3.86□□□□□ -1.79
COL2A1P02458 USP9YP24-201ENST00000434374 697 ntBASIC3.86□□□□□ -1.79
COL2A1P02458 USP9YP17-201ENST00000444617 696 ntBASIC3.86□□□□□ -1.79
COL2A1P02458 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.86□□□□□ -1.79
COL2A1P02458 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.86□□□□□ -1.79
COL2A1P02458 ZNF886P-201ENST00000450781 723 ntBASIC3.86□□□□□ -1.79
COL2A1P02458 PCNAP1-201ENST00000505363 709 ntBASIC3.86□□□□□ -1.79
COL2A1P02458 NARSP2-201ENST00000518524 679 ntBASIC3.86□□□□□ -1.79
COL2A1P02458 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.86□□□□□ -1.79
COL2A1P02458 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC3.86□□□□□ -1.79
COL2A1P02458 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms