Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 RNA5SP385-201ENST00000515947 110 ntBASIC3.15□□□□□ -1.91
SEMA3DO95025 SNORA26.10-201ENST00000516427 141 ntBASIC3.15□□□□□ -1.91
SEMA3DO95025 AC008562.1-201ENST00000521763 330 ntBASIC3.15□□□□□ -1.91
SEMA3DO95025 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.15□□□□□ -1.91
SEMA3DO95025 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.15□□□□□ -1.91
SEMA3DO95025 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.15□□□□□ -1.91
SEMA3DO95025 AC073657.2-201ENST00000605661 303 ntBASIC3.15□□□□□ -1.91
SEMA3DO95025 AL390240.1-201ENST00000612950 384 ntBASIC3.15□□□□□ -1.91
SEMA3DO95025 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.15□□□□□ -1.91
SEMA3DO95025 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.15□□□□□ -1.91
SEMA3DO95025 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.15□□□□□ -1.91
SEMA3DO95025 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SEMA3DO95025 AC022031.1-201ENST00000585985 2593 ntBASIC3.15□□□□□ -1.91
SEMA3DO95025 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SEMA3DO95025 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SEMA3DO95025 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SEMA3DO95025 MTND5P7-201ENST00000413558 1798 ntBASIC3.15□□□□□ -1.91
SEMA3DO95025 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SEMA3DO95025 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.14□□□□□ -1.91
SEMA3DO95025 RNU6-543P-201ENST00000362576 108 ntBASIC3.14□□□□□ -1.91
SEMA3DO95025 RNU1-70P-201ENST00000362618 164 ntBASIC3.14□□□□□ -1.91
SEMA3DO95025 RNA5SP383-201ENST00000362934 120 ntBASIC3.14□□□□□ -1.91
SEMA3DO95025 MIR449B-201ENST00000384995 97 ntBASIC3.14□□□□□ -1.91
SEMA3DO95025 RNU1-101P-201ENST00000391171 127 ntBASIC3.14□□□□□ -1.91
SEMA3DO95025 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.14□□□□□ -1.91
SEMA3DO95025 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.14□□□□□ -1.91
SEMA3DO95025 HSFY4P-201ENST00000415994 1181 ntBASIC3.14□□□□□ -1.91
SEMA3DO95025 SDCBPP3-201ENST00000419629 891 ntBASIC3.14□□□□□ -1.91
SEMA3DO95025 PSMA2P3-201ENST00000429685 675 ntBASIC3.14□□□□□ -1.91
SEMA3DO95025 AC005189.1-201ENST00000431286 310 ntBASIC3.14□□□□□ -1.91
SEMA3DO95025 AC092685.1-201ENST00000447960 1243 ntBASIC3.14□□□□□ -1.91
SEMA3DO95025 AC093392.2-201ENST00000450682 337 ntBASIC3.14□□□□□ -1.91
SEMA3DO95025 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.14□□□□□ -1.91
SEMA3DO95025 FTH1P2-201ENST00000466086 412 ntBASIC3.14□□□□□ -1.91
SEMA3DO95025 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.14□□□□□ -1.91
SEMA3DO95025 HMGN2P13-201ENST00000476476 274 ntBASIC3.14□□□□□ -1.91
SEMA3DO95025 MTCO3P35-201ENST00000485582 781 ntBASIC3.14□□□□□ -1.91
SEMA3DO95025 RN7SL283P-201ENST00000489055 303 ntBASIC3.14□□□□□ -1.91
SEMA3DO95025 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SEMA3DO95025 RN7SKP157-201ENST00000516174 282 ntBASIC3.14□□□□□ -1.91
SEMA3DO95025 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.14□□□□□ -1.91
SEMA3DO95025 MTCYBP41-201ENST00000528913 1123 ntBASIC3.14□□□□□ -1.91
SEMA3DO95025 AC007458.1-201ENST00000542812 373 ntBASIC3.14□□□□□ -1.91
SEMA3DO95025 MAGOH2P-202ENST00000584384 429 ntBASIC3.14□□□□□ -1.91
SEMA3DO95025 NTAN1P1-201ENST00000603150 646 ntBASIC3.14□□□□□ -1.91
SEMA3DO95025 AL157817.1-201ENST00000614264 790 ntBASIC3.14□□□□□ -1.91
SEMA3DO95025 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.14□□□□□ -1.91
SEMA3DO95025 AL161637.1-201ENST00000622380 412 ntBASIC3.14□□□□□ -1.91
SEMA3DO95025 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.14□□□□□ -1.91
SEMA3DO95025 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.14□□□□□ -1.91
SEMA3DO95025 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SEMA3DO95025 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.14□□□□□ -1.91
SEMA3DO95025 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.13□□□□□ -1.91
SEMA3DO95025 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.13□□□□□ -1.91
SEMA3DO95025 AF117829.1-206ENST00000621883 3802 ntBASIC3.13□□□□□ -1.91
SEMA3DO95025 RNU6-335P-201ENST00000364563 113 ntBASIC3.13□□□□□ -1.91
SEMA3DO95025 RNU6-1293P-201ENST00000384077 107 ntBASIC3.13□□□□□ -1.91
SEMA3DO95025 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
SEMA3DO95025 TATDN1P1-201ENST00000414123 891 ntBASIC3.13□□□□□ -1.91
SEMA3DO95025 AL357078.2-201ENST00000416486 427 ntBASIC3.13□□□□□ -1.91
SEMA3DO95025 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SEMA3DO95025 PNRC2P1-201ENST00000423940 420 ntBASIC3.13□□□□□ -1.91
SEMA3DO95025 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.13□□□□□ -1.91
SEMA3DO95025 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.13□□□□□ -1.91
SEMA3DO95025 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.13□□□□□ -1.91
SEMA3DO95025 AL050321.1-201ENST00000432363 400 ntBASIC3.13□□□□□ -1.91
SEMA3DO95025 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.13□□□□□ -1.91
SEMA3DO95025 BTBD7P2-201ENST00000441962 620 ntBASIC3.13□□□□□ -1.91
SEMA3DO95025 CDC27P1-201ENST00000445384 715 ntBASIC3.13□□□□□ -1.91
SEMA3DO95025 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.13□□□□□ -1.91
SEMA3DO95025 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
SEMA3DO95025 AL500527.1-201ENST00000448532 255 ntBASIC3.13□□□□□ -1.91
SEMA3DO95025 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.13□□□□□ -1.91
SEMA3DO95025 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.13□□□□□ -1.91
SEMA3DO95025 KCTD9P5-201ENST00000504141 1170 ntBASIC3.13□□□□□ -1.91
SEMA3DO95025 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
SEMA3DO95025 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.13□□□□□ -1.91
SEMA3DO95025 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.13□□□□□ -1.91
SEMA3DO95025 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.13□□□□□ -1.91
SEMA3DO95025 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.13□□□□□ -1.91
SEMA3DO95025 C1DP5-201ENST00000525775 383 ntBASIC3.13□□□□□ -1.91
SEMA3DO95025 MIR3158-1-201ENST00000583596 81 ntBASIC3.13□□□□□ -1.91
SEMA3DO95025 MIR4506-201ENST00000584693 77 ntBASIC3.13□□□□□ -1.91
SEMA3DO95025 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.13□□□□□ -1.91
SEMA3DO95025 AL590240.3-201ENST00000621416 943 ntBASIC3.13□□□□□ -1.91
SEMA3DO95025 RNU6-156P-201ENST00000621869 107 ntBASIC3.13□□□□□ -1.91
SEMA3DO95025 HPVC1-201ENST00000629899 1198 ntBASIC3.13□□□□□ -1.91
SEMA3DO95025 AC083865.1-201ENST00000636634 831 ntBASIC3.13□□□□□ -1.91
SEMA3DO95025 AL163152.1-201ENST00000642001 374 ntBASIC3.13□□□□□ -1.91
SEMA3DO95025 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SEMA3DO95025 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
SEMA3DO95025 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.12□□□□□ -1.91
SEMA3DO95025 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.12□□□□□ -1.91
SEMA3DO95025 RNU6-796P-201ENST00000391086 107 ntBASIC3.12□□□□□ -1.91
SEMA3DO95025 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SEMA3DO95025 ATF1P1-201ENST00000406040 927 ntBASIC3.12□□□□□ -1.91
SEMA3DO95025 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.12□□□□□ -1.91
SEMA3DO95025 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.12□□□□□ -1.91
SEMA3DO95025 RPL37P1-201ENST00000432310 284 ntBASIC3.12□□□□□ -1.91
SEMA3DO95025 Z95327.1-201ENST00000446082 482 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms