Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.69□□□□□ -1.5
VAMP4O75379 AC138393.2-201ENST00000414742 246 ntBASIC5.69□□□□□ -1.5
VAMP4O75379 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC5.69□□□□□ -1.5
VAMP4O75379 AC234782.4-201ENST00000417646 1048 ntBASIC5.69□□□□□ -1.5
VAMP4O75379 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC5.69□□□□□ -1.5
VAMP4O75379 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.69□□□□□ -1.5
VAMP4O75379 AC233728.2-201ENST00000425348 757 ntBASIC5.69□□□□□ -1.5
VAMP4O75379 DNAJC19P7-201ENST00000428811 344 ntBASIC5.69□□□□□ -1.5
VAMP4O75379 MTND3P23-201ENST00000431980 347 ntBASIC5.69□□□□□ -1.5
VAMP4O75379 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC5.69□□□□□ -1.5
VAMP4O75379 RPS26P40-201ENST00000435209 294 ntBASIC5.69□□□□□ -1.5
VAMP4O75379 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.69□□□□□ -1.5
VAMP4O75379 AC114495.1-201ENST00000441274 436 ntBASIC5.69□□□□□ -1.5
VAMP4O75379 GDI2P2-201ENST00000445131 608 ntBASIC5.69□□□□□ -1.5
VAMP4O75379 ELOCP23-201ENST00000452014 332 ntBASIC5.69□□□□□ -1.5
VAMP4O75379 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.69□□□□□ -1.5
VAMP4O75379 AC006463.2-201ENST00000473326 348 ntBASIC5.69□□□□□ -1.5
VAMP4O75379 AC092989.1-201ENST00000481235 277 ntBASIC5.69□□□□□ -1.5
VAMP4O75379 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC5.69□□□□□ -1.5
VAMP4O75379 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC5.69□□□□□ -1.5
VAMP4O75379 AC010342.1-201ENST00000514047 877 ntBASIC5.69□□□□□ -1.5
VAMP4O75379 RNU6-488P-201ENST00000515918 99 ntBASIC5.69□□□□□ -1.5
VAMP4O75379 RNU6-513P-201ENST00000516104 104 ntBASIC5.69□□□□□ -1.5
VAMP4O75379 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC5.69□□□□□ -1.5
VAMP4O75379 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC5.69□□□□□ -1.5
VAMP4O75379 CYCSP28-201ENST00000534284 321 ntBASIC5.69□□□□□ -1.5
VAMP4O75379 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.69□□□□□ -1.5
VAMP4O75379 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
VAMP4O75379 RPL23AP97-201ENST00000568955 471 ntBASIC5.69□□□□□ -1.5
VAMP4O75379 AC017100.2-201ENST00000584628 355 ntBASIC5.69□□□□□ -1.5
VAMP4O75379 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.69□□□□□ -1.5
VAMP4O75379 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.69□□□□□ -1.5
VAMP4O75379 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC5.69□□□□□ -1.5
VAMP4O75379 RPL26P30-202ENST00000602923 645 ntBASIC5.69□□□□□ -1.5
VAMP4O75379 AP000907.4-201ENST00000604143 237 ntBASIC5.69□□□□□ -1.5
VAMP4O75379 AL160290.3-201ENST00000604869 165 ntBASIC5.69□□□□□ -1.5
VAMP4O75379 AC090948.1-201ENST00000607464 549 ntBASIC5.69□□□□□ -1.5
VAMP4O75379 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC5.69□□□□□ -1.5
VAMP4O75379 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.69□□□□□ -1.5
VAMP4O75379 AC002553.4-201ENST00000616896 331 ntBASIC5.69□□□□□ -1.5
VAMP4O75379 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
VAMP4O75379 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.69□□□□□ -1.5
VAMP4O75379 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC5.69□□□□□ -1.5
VAMP4O75379 AC099654.5-201ENST00000636479 350 ntBASIC5.69□□□□□ -1.5
VAMP4O75379 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
VAMP4O75379 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VAMP4O75379 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VAMP4O75379 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.69□□□□□ -1.5
VAMP4O75379 AC025031.4-201ENST00000621248 3271 ntBASIC5.69□□□□□ -1.5
VAMP4O75379 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VAMP4O75379 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VAMP4O75379 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
VAMP4O75379 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VAMP4O75379 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VAMP4O75379 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VAMP4O75379 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
VAMP4O75379 OR5P1P-201ENST00000299512 925 ntBASIC5.68□□□□□ -1.5
VAMP4O75379 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
VAMP4O75379 MIR331-201ENST00000362302 94 ntBASIC5.68□□□□□ -1.5
VAMP4O75379 Y_RNA.453-201ENST00000384223 109 ntBASIC5.68□□□□□ -1.5
VAMP4O75379 AL590002.1-201ENST00000406554 418 ntBASIC5.68□□□□□ -1.5
VAMP4O75379 SNORA74C-2-201ENST00000411179 201 ntBASIC5.68□□□□□ -1.5
VAMP4O75379 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.68□□□□□ -1.5
VAMP4O75379 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC5.68□□□□□ -1.5
VAMP4O75379 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.68□□□□□ -1.5
VAMP4O75379 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC5.68□□□□□ -1.5
VAMP4O75379 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.68□□□□□ -1.5
VAMP4O75379 MTCO1P27-201ENST00000448269 226 ntBASIC5.68□□□□□ -1.5
VAMP4O75379 TPT1P13-201ENST00000449760 499 ntBASIC5.68□□□□□ -1.5
VAMP4O75379 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.68□□□□□ -1.5
VAMP4O75379 MEMO1P3-201ENST00000459811 302 ntBASIC5.68□□□□□ -1.5
VAMP4O75379 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC5.68□□□□□ -1.5
VAMP4O75379 RNA5SP497-201ENST00000516081 97 ntBASIC5.68□□□□□ -1.5
VAMP4O75379 SNORA18.6-201ENST00000516792 115 ntBASIC5.68□□□□□ -1.5
VAMP4O75379 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.68□□□□□ -1.5
VAMP4O75379 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.68□□□□□ -1.5
VAMP4O75379 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.68□□□□□ -1.5
VAMP4O75379 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.68□□□□□ -1.5
VAMP4O75379 TRAV8-5-201ENST00000537369 341 ntBASIC5.68□□□□□ -1.5
VAMP4O75379 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC5.68□□□□□ -1.5
VAMP4O75379 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VAMP4O75379 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.68□□□□□ -1.5
VAMP4O75379 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC5.68□□□□□ -1.5
VAMP4O75379 MIR4307-201ENST00000582802 84 ntBASIC5.68□□□□□ -1.5
VAMP4O75379 AC009977.1-201ENST00000586015 570 ntBASIC5.68□□□□□ -1.5
VAMP4O75379 AC091965.4-201ENST00000607691 587 ntBASIC5.68□□□□□ -1.5
VAMP4O75379 AC097468.3-201ENST00000607956 456 ntBASIC5.68□□□□□ -1.5
VAMP4O75379 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.68□□□□□ -1.5
VAMP4O75379 AC006378.2-201ENST00000623178 2476 ntBASIC5.68□□□□□ -1.5
VAMP4O75379 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VAMP4O75379 AP000756.2-201ENST00000624168 2567 ntBASIC5.67□□□□□ -1.5
VAMP4O75379 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.67□□□□□ -1.5
VAMP4O75379 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VAMP4O75379 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.67□□□□□ -1.5
VAMP4O75379 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
VAMP4O75379 Y_RNA.296-201ENST00000364930 108 ntBASIC5.67□□□□□ -1.5
VAMP4O75379 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
VAMP4O75379 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VAMP4O75379 GSTA9P-201ENST00000406231 611 ntBASIC5.67□□□□□ -1.5
VAMP4O75379 CCNG1P1-201ENST00000406783 885 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms