Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
GRIN3BO60391 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
GRIN3BO60391 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
GRIN3BO60391 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
GRIN3BO60391 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.89□□□□□ -1.47
GRIN3BO60391 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
GRIN3BO60391 AC090229.1-201ENST00000590983 1609 ntBASIC5.89□□□□□ -1.47
GRIN3BO60391 AC133552.1-201ENST00000569988 4007 ntBASIC5.89□□□□□ -1.47
GRIN3BO60391 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
GRIN3BO60391 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
GRIN3BO60391 Y_RNA.1-201ENST00000352915 104 ntBASIC5.89□□□□□ -1.47
GRIN3BO60391 RNU6-984P-201ENST00000363236 109 ntBASIC5.89□□□□□ -1.47
GRIN3BO60391 RNU6-1009P-201ENST00000390996 107 ntBASIC5.89□□□□□ -1.47
GRIN3BO60391 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
GRIN3BO60391 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.89□□□□□ -1.47
GRIN3BO60391 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
GRIN3BO60391 MTCO1P20-201ENST00000425366 358 ntBASIC5.89□□□□□ -1.47
GRIN3BO60391 RWDD4P2-201ENST00000426392 563 ntBASIC5.89□□□□□ -1.47
GRIN3BO60391 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
GRIN3BO60391 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC5.89□□□□□ -1.47
GRIN3BO60391 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC5.89□□□□□ -1.47
GRIN3BO60391 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
GRIN3BO60391 FABP3P2-201ENST00000453169 399 ntBASIC5.89□□□□□ -1.47
GRIN3BO60391 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.89□□□□□ -1.47
GRIN3BO60391 AC026410.2-201ENST00000460281 156 ntBASIC5.89□□□□□ -1.47
GRIN3BO60391 RPL38P1-201ENST00000460914 211 ntBASIC5.89□□□□□ -1.47
GRIN3BO60391 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
GRIN3BO60391 RPS29P25-201ENST00000481709 171 ntBASIC5.89□□□□□ -1.47
GRIN3BO60391 THAP6-203ENST00000502620 582 ntTSL 3 BASIC5.89□□□□□ -1.47
GRIN3BO60391 OR5H5P-201ENST00000503164 928 ntBASIC5.89□□□□□ -1.47
GRIN3BO60391 HSPA8P13-201ENST00000523715 472 ntBASIC5.89□□□□□ -1.47
GRIN3BO60391 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC5.89□□□□□ -1.47
GRIN3BO60391 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC5.89□□□□□ -1.47
GRIN3BO60391 AP003034.1-201ENST00000534621 422 ntBASIC5.89□□□□□ -1.47
GRIN3BO60391 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC5.89□□□□□ -1.47
GRIN3BO60391 AC034268.2-201ENST00000571784 482 ntBASIC5.89□□□□□ -1.47
GRIN3BO60391 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC5.89□□□□□ -1.47
GRIN3BO60391 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
GRIN3BO60391 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
GRIN3BO60391 AL451049.1-201ENST00000608672 497 ntBASIC5.89□□□□□ -1.47
GRIN3BO60391 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
GRIN3BO60391 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.89□□□□□ -1.47
GRIN3BO60391 AC009033.1-201ENST00000624279 431 ntBASIC5.89□□□□□ -1.47
GRIN3BO60391 AL359697.1-201ENST00000624879 587 ntBASIC5.89□□□□□ -1.47
GRIN3BO60391 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.89□□□□□ -1.47
GRIN3BO60391 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.89□□□□□ -1.47
GRIN3BO60391 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
GRIN3BO60391 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.89□□□□□ -1.47
GRIN3BO60391 AC138915.3-201ENST00000562908 1389 ntBASIC5.89□□□□□ -1.47
GRIN3BO60391 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.89□□□□□ -1.47
GRIN3BO60391 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.89□□□□□ -1.47
GRIN3BO60391 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.89□□□□□ -1.47
GRIN3BO60391 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.89□□□□□ -1.47
GRIN3BO60391 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
GRIN3BO60391 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
GRIN3BO60391 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
GRIN3BO60391 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
GRIN3BO60391 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
GRIN3BO60391 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.88□□□□□ -1.47
GRIN3BO60391 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
GRIN3BO60391 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
GRIN3BO60391 RPL23AP57-201ENST00000332361 466 ntBASIC5.88□□□□□ -1.47
GRIN3BO60391 RNU6-289P-201ENST00000364093 107 ntBASIC5.88□□□□□ -1.47
GRIN3BO60391 SNORA71.2-201ENST00000364941 134 ntBASIC5.88□□□□□ -1.47
GRIN3BO60391 RNA5SP366-201ENST00000365454 123 ntBASIC5.88□□□□□ -1.47
GRIN3BO60391 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
GRIN3BO60391 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.88□□□□□ -1.47
GRIN3BO60391 RNU6-921P-201ENST00000384361 107 ntBASIC5.88□□□□□ -1.47
GRIN3BO60391 RNU6-1011P-201ENST00000384668 107 ntBASIC5.88□□□□□ -1.47
GRIN3BO60391 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.88□□□□□ -1.47
GRIN3BO60391 CYCSP19-201ENST00000411715 316 ntBASIC5.88□□□□□ -1.47
GRIN3BO60391 RPS3AP9-201ENST00000417027 792 ntBASIC5.88□□□□□ -1.47
GRIN3BO60391 CYCSP10-201ENST00000417973 294 ntBASIC5.88□□□□□ -1.47
GRIN3BO60391 USP9YP27-201ENST00000418455 438 ntBASIC5.88□□□□□ -1.47
GRIN3BO60391 USP9YP36-201ENST00000424581 829 ntBASIC5.88□□□□□ -1.47
GRIN3BO60391 RPL37P1-201ENST00000432310 284 ntBASIC5.88□□□□□ -1.47
GRIN3BO60391 AC011998.1-201ENST00000433403 117 ntBASIC5.88□□□□□ -1.47
GRIN3BO60391 AC007389.2-201ENST00000434630 306 ntBASIC5.88□□□□□ -1.47
GRIN3BO60391 RPS3AP54-201ENST00000435535 734 ntBASIC5.88□□□□□ -1.47
GRIN3BO60391 RPL23AP16-201ENST00000441715 421 ntBASIC5.88□□□□□ -1.47
GRIN3BO60391 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.88□□□□□ -1.47
GRIN3BO60391 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC5.88□□□□□ -1.47
GRIN3BO60391 RBM43P1-201ENST00000476891 1081 ntBASIC5.88□□□□□ -1.47
GRIN3BO60391 RPL35P6-201ENST00000490024 372 ntBASIC5.88□□□□□ -1.47
GRIN3BO60391 TMEM251P1-201ENST00000503717 318 ntBASIC5.88□□□□□ -1.47
GRIN3BO60391 PARP4P3-201ENST00000510265 317 ntBASIC5.88□□□□□ -1.47
GRIN3BO60391 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.88□□□□□ -1.47
GRIN3BO60391 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.88□□□□□ -1.47
GRIN3BO60391 HMGN1P9-201ENST00000515212 298 ntBASIC5.88□□□□□ -1.47
GRIN3BO60391 Y_RNA.693-201ENST00000516641 110 ntBASIC5.88□□□□□ -1.47
GRIN3BO60391 AC104986.1-201ENST00000517978 436 ntBASIC5.88□□□□□ -1.47
GRIN3BO60391 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.88□□□□□ -1.47
GRIN3BO60391 AC090515.3-201ENST00000560431 315 ntBASIC5.88□□□□□ -1.47
GRIN3BO60391 AL157394.1-201ENST00000562983 1224 ntBASIC5.88□□□□□ -1.47
GRIN3BO60391 AL133457.1-201ENST00000564251 987 ntBASIC5.88□□□□□ -1.47
GRIN3BO60391 RN7SL802P-201ENST00000577858 299 ntBASIC5.88□□□□□ -1.47
GRIN3BO60391 UBE2V2P2-201ENST00000587677 504 ntBASIC5.88□□□□□ -1.47
GRIN3BO60391 HMGN1P30-201ENST00000589286 268 ntBASIC5.88□□□□□ -1.47
GRIN3BO60391 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC5.88□□□□□ -1.47
GRIN3BO60391 CKS1BP3-201ENST00000600888 237 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms