Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.13□□□□□ -1.75
LDB2O43679 AC026402.1-201ENST00000513642 170 ntBASIC4.13□□□□□ -1.75
LDB2O43679 RNU7-143P-201ENST00000516781 65 ntBASIC4.13□□□□□ -1.75
LDB2O43679 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.13□□□□□ -1.75
LDB2O43679 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.13□□□□□ -1.75
LDB2O43679 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.13□□□□□ -1.75
LDB2O43679 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.13□□□□□ -1.75
LDB2O43679 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.13□□□□□ -1.75
LDB2O43679 RN7SL600P-201ENST00000581811 299 ntBASIC4.13□□□□□ -1.75
LDB2O43679 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.13□□□□□ -1.75
LDB2O43679 U73023.1-201ENST00000603134 700 ntBASIC4.13□□□□□ -1.75
LDB2O43679 AL596327.1-201ENST00000603629 213 ntBASIC4.13□□□□□ -1.75
LDB2O43679 AC103591.3-201ENST00000608684 209 ntBASIC4.13□□□□□ -1.75
LDB2O43679 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.13□□□□□ -1.75
LDB2O43679 AC008121.2-201ENST00000614647 523 ntBASIC4.13□□□□□ -1.75
LDB2O43679 AC009878.1-201ENST00000621819 340 ntBASIC4.13□□□□□ -1.75
LDB2O43679 AC092656.1-203ENST00000624134 423 ntBASIC4.13□□□□□ -1.75
LDB2O43679 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.13□□□□□ -1.75
LDB2O43679 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.13□□□□□ -1.75
LDB2O43679 LINC01109-201ENST00000603837 3081 ntBASIC4.13□□□□□ -1.75
LDB2O43679 MARK2P15-201ENST00000432204 2186 ntBASIC4.13□□□□□ -1.75
LDB2O43679 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LDB2O43679 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
LDB2O43679 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LDB2O43679 AC107081.3-201ENST00000612715 2034 ntBASIC4.12□□□□□ -1.75
LDB2O43679 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
LDB2O43679 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
LDB2O43679 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
LDB2O43679 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
LDB2O43679 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.12□□□□□ -1.75
LDB2O43679 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LDB2O43679 RPL21P132-201ENST00000331267 462 ntBASIC4.12□□□□□ -1.75
LDB2O43679 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.12□□□□□ -1.75
LDB2O43679 RNA5SP513-201ENST00000364648 118 ntBASIC4.12□□□□□ -1.75
LDB2O43679 RN7SKP263-201ENST00000411194 309 ntBASIC4.12□□□□□ -1.75
LDB2O43679 PGBD4P8-201ENST00000412993 562 ntBASIC4.12□□□□□ -1.75
LDB2O43679 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.12□□□□□ -1.75
LDB2O43679 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.12□□□□□ -1.75
LDB2O43679 AL358472.1-201ENST00000431295 329 ntBASIC4.12□□□□□ -1.75
LDB2O43679 AP000936.2-201ENST00000447151 681 ntBASIC4.12□□□□□ -1.75
LDB2O43679 AC114755.5-201ENST00000447760 831 ntBASIC4.12□□□□□ -1.75
LDB2O43679 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.12□□□□□ -1.75
LDB2O43679 ZNF114P1-201ENST00000453500 292 ntBASIC4.12□□□□□ -1.75
LDB2O43679 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.12□□□□□ -1.75
LDB2O43679 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.12□□□□□ -1.75
LDB2O43679 RNU6-583P-201ENST00000516012 92 ntBASIC4.12□□□□□ -1.75
LDB2O43679 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.12□□□□□ -1.75
LDB2O43679 AC008802.1-201ENST00000519121 791 ntBASIC4.12□□□□□ -1.75
LDB2O43679 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.12□□□□□ -1.75
LDB2O43679 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.12□□□□□ -1.75
LDB2O43679 MTCYBP20-201ENST00000524239 1129 ntBASIC4.12□□□□□ -1.75
LDB2O43679 AC239860.2-201ENST00000525886 270 ntBASIC4.12□□□□□ -1.75
LDB2O43679 AP000873.5-201ENST00000533906 236 ntBASIC4.12□□□□□ -1.75
LDB2O43679 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.12□□□□□ -1.75
LDB2O43679 AC074051.3-201ENST00000570238 358 ntBASIC4.12□□□□□ -1.75
LDB2O43679 RPL23AP87-202ENST00000573039 466 ntBASIC4.12□□□□□ -1.75
LDB2O43679 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.12□□□□□ -1.75
LDB2O43679 AC012603.1-201ENST00000606424 528 ntBASIC4.12□□□□□ -1.75
LDB2O43679 AC123768.4-201ENST00000616244 701 ntBASIC4.12□□□□□ -1.75
LDB2O43679 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.12□□□□□ -1.75
LDB2O43679 ZYXP1-201ENST00000617638 118 ntBASIC4.12□□□□□ -1.75
LDB2O43679 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.12□□□□□ -1.75
LDB2O43679 AC026585.1-201ENST00000619582 524 ntBASIC4.12□□□□□ -1.75
LDB2O43679 AL023881.1-201ENST00000621088 301 ntBASIC4.12□□□□□ -1.75
LDB2O43679 AL359715.5-201ENST00000623431 443 ntBASIC4.12□□□□□ -1.75
LDB2O43679 AC092192.1-201ENST00000633154 1018 ntBASIC4.12□□□□□ -1.75
LDB2O43679 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.12□□□□□ -1.75
LDB2O43679 AC006927.3-201ENST00000638789 384 ntBASIC4.12□□□□□ -1.75
LDB2O43679 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.12□□□□□ -1.75
LDB2O43679 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.12□□□□□ -1.75
LDB2O43679 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.12□□□□□ -1.75
LDB2O43679 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
LDB2O43679 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.12□□□□□ -1.75
LDB2O43679 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LDB2O43679 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LDB2O43679 MTND5P24-201ENST00000438892 1767 ntBASIC4.12□□□□□ -1.75
LDB2O43679 AC092104.1-201ENST00000497346 1441 ntBASIC4.12□□□□□ -1.75
LDB2O43679 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LDB2O43679 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LDB2O43679 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.11□□□□□ -1.75
LDB2O43679 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.11□□□□□ -1.75
LDB2O43679 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.11□□□□□ -1.75
LDB2O43679 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LDB2O43679 XPOTP1-201ENST00000443317 2398 ntBASIC4.11□□□□□ -1.75
LDB2O43679 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
LDB2O43679 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LDB2O43679 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LDB2O43679 OR4A15-201ENST00000314706 1035 ntBASIC4.11□□□□□ -1.75
LDB2O43679 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LDB2O43679 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
LDB2O43679 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.11□□□□□ -1.75
LDB2O43679 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.11□□□□□ -1.75
LDB2O43679 U3.4-201ENST00000363352 213 ntBASIC4.11□□□□□ -1.75
LDB2O43679 RNU6-374P-201ENST00000364146 108 ntBASIC4.11□□□□□ -1.75
LDB2O43679 RNA5SP88-201ENST00000365560 109 ntBASIC4.11□□□□□ -1.75
LDB2O43679 RHOT1P2-201ENST00000366423 333 ntBASIC4.11□□□□□ -1.75
LDB2O43679 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.11□□□□□ -1.75
LDB2O43679 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LDB2O43679 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
LDB2O43679 MIR93-201ENST00000385024 80 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms