Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC5.74□□□□□ -1.49
SOX1O00570 AL163153.1-201ENST00000554223 283 ntBASIC5.74□□□□□ -1.49
SOX1O00570 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC5.74□□□□□ -1.49
SOX1O00570 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.74□□□□□ -1.49
SOX1O00570 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SOX1O00570 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.74□□□□□ -1.49
SOX1O00570 AP005403.1-201ENST00000579720 229 ntBASIC5.74□□□□□ -1.49
SOX1O00570 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
SOX1O00570 VN1R85P-201ENST00000601587 426 ntBASIC5.74□□□□□ -1.49
SOX1O00570 AC068790.3-201ENST00000602988 553 ntBASIC5.74□□□□□ -1.49
SOX1O00570 7SK.7-201ENST00000603504 247 ntBASIC5.74□□□□□ -1.49
SOX1O00570 APOOP1-201ENST00000604695 592 ntBASIC5.74□□□□□ -1.49
SOX1O00570 AC245389.1-201ENST00000605141 529 ntBASIC5.74□□□□□ -1.49
SOX1O00570 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC5.74□□□□□ -1.49
SOX1O00570 AC007792.1-201ENST00000623023 402 ntBASIC5.74□□□□□ -1.49
SOX1O00570 CR392039.4-201ENST00000624968 501 ntBASIC5.74□□□□□ -1.49
SOX1O00570 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC5.74□□□□□ -1.49
SOX1O00570 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
SOX1O00570 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.74□□□□□ -1.49
SOX1O00570 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SOX1O00570 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
SOX1O00570 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SOX1O00570 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SOX1O00570 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
SOX1O00570 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
SOX1O00570 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SOX1O00570 CD36-221ENST00000534394 1741 ntTSL 2 BASIC5.74□□□□□ -1.49
SOX1O00570 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SOX1O00570 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
SOX1O00570 MFSD8-239ENST00000641590 2479 ntBASIC5.73□□□□□ -1.49
SOX1O00570 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.73□□□□□ -1.49
SOX1O00570 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC5.73□□□□□ -1.49
SOX1O00570 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
SOX1O00570 AC067945.1-201ENST00000342609 618 ntBASIC5.73□□□□□ -1.49
SOX1O00570 RNU6-1309P-201ENST00000363305 108 ntBASIC5.73□□□□□ -1.49
SOX1O00570 Y_RNA.187-201ENST00000363918 113 ntBASIC5.73□□□□□ -1.49
SOX1O00570 RNU1-64P-201ENST00000365443 163 ntBASIC5.73□□□□□ -1.49
SOX1O00570 RNU4-20P-201ENST00000365601 151 ntBASIC5.73□□□□□ -1.49
SOX1O00570 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SOX1O00570 AL592114.1-201ENST00000403842 483 ntBASIC5.73□□□□□ -1.49
SOX1O00570 AL009179.1-201ENST00000406085 265 ntBASIC5.73□□□□□ -1.49
SOX1O00570 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC5.73□□□□□ -1.49
SOX1O00570 AC114495.1-201ENST00000441274 436 ntBASIC5.73□□□□□ -1.49
SOX1O00570 RPL34P20-201ENST00000442771 351 ntBASIC5.73□□□□□ -1.49
SOX1O00570 Z95327.1-201ENST00000446082 482 ntBASIC5.73□□□□□ -1.49
SOX1O00570 GAPDHP25-201ENST00000447061 1001 ntBASIC5.73□□□□□ -1.49
SOX1O00570 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.73□□□□□ -1.49
SOX1O00570 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.73□□□□□ -1.49
SOX1O00570 RPS4XP10-201ENST00000465034 731 ntBASIC5.73□□□□□ -1.49
SOX1O00570 AC091167.1-201ENST00000492017 396 ntBASIC5.73□□□□□ -1.49
SOX1O00570 AC017037.1-201ENST00000508460 471 ntBASIC5.73□□□□□ -1.49
SOX1O00570 SCARNA13-201ENST00000516672 275 ntBASIC5.73□□□□□ -1.49
SOX1O00570 SUMO2P20-201ENST00000520803 283 ntBASIC5.73□□□□□ -1.49
SOX1O00570 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.73□□□□□ -1.49
SOX1O00570 CYCSP29-201ENST00000533731 318 ntBASIC5.73□□□□□ -1.49
SOX1O00570 SNRPGP18-201ENST00000553000 214 ntBASIC5.73□□□□□ -1.49
SOX1O00570 SETP2-201ENST00000553886 926 ntBASIC5.73□□□□□ -1.49
SOX1O00570 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.73□□□□□ -1.49
SOX1O00570 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.73□□□□□ -1.49
SOX1O00570 AC053481.3-201ENST00000577881 843 ntBASIC5.73□□□□□ -1.49
SOX1O00570 GLUD1P4-201ENST00000590914 418 ntBASIC5.73□□□□□ -1.49
SOX1O00570 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.73□□□□□ -1.49
SOX1O00570 VN1R107P-201ENST00000601784 209 ntBASIC5.73□□□□□ -1.49
SOX1O00570 OR6R2P-201ENST00000609216 300 ntBASIC5.73□□□□□ -1.49
SOX1O00570 AC091925.1-201ENST00000623204 462 ntBASIC5.73□□□□□ -1.49
SOX1O00570 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
SOX1O00570 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
SOX1O00570 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SOX1O00570 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
SOX1O00570 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
SOX1O00570 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SOX1O00570 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.73□□□□□ -1.49
SOX1O00570 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SOX1O00570 AC097714.1-201ENST00000511272 1647 ntBASIC5.73□□□□□ -1.49
SOX1O00570 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SOX1O00570 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SOX1O00570 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
SOX1O00570 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
SOX1O00570 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.73□□□□□ -1.49
SOX1O00570 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
SOX1O00570 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
SOX1O00570 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.72□□□□□ -1.49
SOX1O00570 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.72□□□□□ -1.49
SOX1O00570 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SOX1O00570 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
SOX1O00570 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SOX1O00570 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
SOX1O00570 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SOX1O00570 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SOX1O00570 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SOX1O00570 SNORD8-201ENST00000363915 110 ntBASIC5.72□□□□□ -1.49
SOX1O00570 RNA5SP428-201ENST00000365129 132 ntBASIC5.72□□□□□ -1.49
SOX1O00570 RNU4-66P-201ENST00000365199 138 ntBASIC5.72□□□□□ -1.49
SOX1O00570 Y_RNA.339-201ENST00000365325 102 ntBASIC5.72□□□□□ -1.49
SOX1O00570 RNU6-38P-201ENST00000384085 107 ntBASIC5.72□□□□□ -1.49
SOX1O00570 DSTNP4-201ENST00000399472 474 ntBASIC5.72□□□□□ -1.49
SOX1O00570 RNU4-25P-201ENST00000410569 230 ntBASIC5.72□□□□□ -1.49
SOX1O00570 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.72□□□□□ -1.49
SOX1O00570 AC113618.1-201ENST00000416747 285 ntBASIC5.72□□□□□ -1.49
SOX1O00570 AC012065.2-201ENST00000421295 375 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms