Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC004801.2-202ENST00000463559 283 ntBASIC3.94□□□□□ -1.78
O00370 AC134050.1-201ENST00000495088 933 ntBASIC3.94□□□□□ -1.78
O00370 AC078918.1-201ENST00000498515 228 ntBASIC3.94□□□□□ -1.78
O00370 AC020699.1-201ENST00000505161 445 ntBASIC3.94□□□□□ -1.78
O00370 AC016065.2-201ENST00000514530 444 ntBASIC3.94□□□□□ -1.78
O00370 RN7SKP209-201ENST00000516888 304 ntBASIC3.94□□□□□ -1.78
O00370 HIGD1AP6-201ENST00000521833 279 ntBASIC3.94□□□□□ -1.78
O00370 AP001207.1-201ENST00000524051 481 ntBASIC3.94□□□□□ -1.78
O00370 OR4R3P-201ENST00000525084 838 ntBASIC3.94□□□□□ -1.78
O00370 OR5D17P-201ENST00000531492 978 ntBASIC3.94□□□□□ -1.78
O00370 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.94□□□□□ -1.78
O00370 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.94□□□□□ -1.78
O00370 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.94□□□□□ -1.78
O00370 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
O00370 AGGF1P8-201ENST00000562979 1000 ntBASIC3.94□□□□□ -1.78
O00370 AC015688.2-201ENST00000584523 262 ntBASIC3.94□□□□□ -1.78
O00370 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.94□□□□□ -1.78
O00370 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.94□□□□□ -1.78
O00370 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.94□□□□□ -1.78
O00370 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.94□□□□□ -1.78
O00370 AP004247.3-201ENST00000608682 624 ntBASIC3.94□□□□□ -1.78
O00370 RMST_8.1-201ENST00000610287 165 ntBASIC3.94□□□□□ -1.78
O00370 AL592295.2-201ENST00000612578 206 ntBASIC3.94□□□□□ -1.78
O00370 AL391261.4-201ENST00000616012 481 ntBASIC3.94□□□□□ -1.78
O00370 AL121895.2-201ENST00000619558 447 ntBASIC3.94□□□□□ -1.78
O00370 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.94□□□□□ -1.78
O00370 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.94□□□□□ -1.78
O00370 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.94□□□□□ -1.78
O00370 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
O00370 MFSD8-236ENST00000641509 4050 ntBASIC3.94□□□□□ -1.78
O00370 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
O00370 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
O00370 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
O00370 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.94□□□□□ -1.78
O00370 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.94□□□□□ -1.78
O00370 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.94□□□□□ -1.78
O00370 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.94□□□□□ -1.78
O00370 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.93□□□□□ -1.78
O00370 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
O00370 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
O00370 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.93□□□□□ -1.78
O00370 NACA3P-201ENST00000359690 648 ntBASIC3.93□□□□□ -1.78
O00370 RNU4-51P-201ENST00000364206 140 ntBASIC3.93□□□□□ -1.78
O00370 RNU6-707P-201ENST00000364647 95 ntBASIC3.93□□□□□ -1.78
O00370 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.93□□□□□ -1.78
O00370 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
O00370 RNU6-1151P-201ENST00000384684 107 ntBASIC3.93□□□□□ -1.78
O00370 RNU6-1242P-201ENST00000391052 103 ntBASIC3.93□□□□□ -1.78
O00370 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.93□□□□□ -1.78
O00370 AC007066.1-201ENST00000392902 381 ntBASIC3.93□□□□□ -1.78
O00370 EIF5P1-201ENST00000400019 1231 ntBASIC3.93□□□□□ -1.78
O00370 AC069218.2-201ENST00000411665 344 ntBASIC3.93□□□□□ -1.78
O00370 RPL36AP36-201ENST00000418616 301 ntBASIC3.93□□□□□ -1.78
O00370 UBE2V1P1-201ENST00000430836 445 ntBASIC3.93□□□□□ -1.78
O00370 AC010881.1-201ENST00000433830 235 ntBASIC3.93□□□□□ -1.78
O00370 NANOGP2-201ENST00000435391 727 ntBASIC3.93□□□□□ -1.78
O00370 AL359073.1-201ENST00000448036 403 ntBASIC3.93□□□□□ -1.78
O00370 NDUFA5P7-201ENST00000452914 242 ntBASIC3.93□□□□□ -1.78
O00370 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.93□□□□□ -1.78
O00370 OFD1P3Y-201ENST00000453312 783 ntBASIC3.93□□□□□ -1.78
O00370 GAPDHP39-201ENST00000481866 979 ntBASIC3.93□□□□□ -1.78
O00370 AP001086.1-201ENST00000494882 321 ntBASIC3.93□□□□□ -1.78
O00370 AC068305.1-201ENST00000497406 726 ntBASIC3.93□□□□□ -1.78
O00370 UBE2CP3-201ENST00000502715 450 ntBASIC3.93□□□□□ -1.78
O00370 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.93□□□□□ -1.78
O00370 AC026784.1-201ENST00000507986 352 ntBASIC3.93□□□□□ -1.78
O00370 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.93□□□□□ -1.78
O00370 RNU6-885P-201ENST00000516607 104 ntBASIC3.93□□□□□ -1.78
O00370 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.93□□□□□ -1.78
O00370 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
O00370 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.93□□□□□ -1.78
O00370 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.93□□□□□ -1.78
O00370 AC008011.1-201ENST00000545989 227 ntBASIC3.93□□□□□ -1.78
O00370 EIF5A2P1-201ENST00000564027 460 ntBASIC3.93□□□□□ -1.78
O00370 AC017100.2-201ENST00000584628 355 ntBASIC3.93□□□□□ -1.78
O00370 AC007566.2-201ENST00000603642 413 ntBASIC3.93□□□□□ -1.78
O00370 AC112230.1-201ENST00000604342 547 ntBASIC3.93□□□□□ -1.78
O00370 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.93□□□□□ -1.78
O00370 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.93□□□□□ -1.78
O00370 AL356863.1-201ENST00000623378 1080 ntBASIC3.93□□□□□ -1.78
O00370 AP000770.2-201ENST00000623694 100 ntBASIC3.93□□□□□ -1.78
O00370 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.93□□□□□ -1.78
O00370 MIR4278-201ENST00000636094 69 ntBASIC3.93□□□□□ -1.78
O00370 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
O00370 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.93□□□□□ -1.78
O00370 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
O00370 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.93□□□□□ -1.78
O00370 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
O00370 AL355578.1-201ENST00000607405 1328 ntBASIC3.93□□□□□ -1.78
O00370 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.93□□□□□ -1.78
O00370 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.93□□□□□ -1.78
O00370 Z99496.1-201ENST00000469424 1477 ntBASIC3.92□□□□□ -1.78
O00370 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.92□□□□□ -1.78
O00370 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
O00370 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
O00370 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
O00370 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
O00370 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
O00370 RNU6-1243P-201ENST00000364028 107 ntBASIC3.92□□□□□ -1.78
O00370 TMSB4XP8-201ENST00000402089 135 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms