Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AL606834.2-201ENST00000602954 668 ntBASIC2.94□□□□□ -1.94
UPK1AO00322 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.94□□□□□ -1.94
UPK1AO00322 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.94□□□□□ -1.94
UPK1AO00322 AC138932.5-201ENST00000617759 563 ntBASIC2.94□□□□□ -1.94
UPK1AO00322 RNU6-156P-201ENST00000621869 107 ntBASIC2.94□□□□□ -1.94
UPK1AO00322 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC2.94□□□□□ -1.94
UPK1AO00322 AC084035.1-201ENST00000634543 607 ntBASIC2.94□□□□□ -1.94
UPK1AO00322 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
UPK1AO00322 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
UPK1AO00322 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
UPK1AO00322 NSRP1P1-201ENST00000444067 1693 ntBASIC2.94□□□□□ -1.94
UPK1AO00322 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.94□□□□□ -1.94
UPK1AO00322 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
UPK1AO00322 RNA5SP72-201ENST00000364442 117 ntBASIC2.93□□□□□ -1.94
UPK1AO00322 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
UPK1AO00322 RNVU1-14-201ENST00000384770 164 ntBASIC2.93□□□□□ -1.94
UPK1AO00322 RNA5SP171-201ENST00000391071 115 ntBASIC2.93□□□□□ -1.94
UPK1AO00322 RN7SKP123-201ENST00000410732 291 ntBASIC2.93□□□□□ -1.94
UPK1AO00322 RNU4-47P-201ENST00000410876 114 ntBASIC2.93□□□□□ -1.94
UPK1AO00322 RNA5SP120-201ENST00000410900 112 ntBASIC2.93□□□□□ -1.94
UPK1AO00322 AL158156.1-201ENST00000422509 473 ntBASIC2.93□□□□□ -1.94
UPK1AO00322 SETP5-201ENST00000437270 562 ntBASIC2.93□□□□□ -1.94
UPK1AO00322 AC091862.1-201ENST00000438016 1100 ntBASIC2.93□□□□□ -1.94
UPK1AO00322 AC108734.1-201ENST00000439549 399 ntBASIC2.93□□□□□ -1.94
UPK1AO00322 RPL23AP33-201ENST00000442301 452 ntBASIC2.93□□□□□ -1.94
UPK1AO00322 HMGN2P21-201ENST00000447764 270 ntBASIC2.93□□□□□ -1.94
UPK1AO00322 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.93□□□□□ -1.94
UPK1AO00322 MTND3P4-201ENST00000453537 303 ntBASIC2.93□□□□□ -1.94
UPK1AO00322 PTGES3P5-201ENST00000455109 434 ntBASIC2.93□□□□□ -1.94
UPK1AO00322 snoU13.7-201ENST00000459220 104 ntBASIC2.93□□□□□ -1.94
UPK1AO00322 PRDX3P4-201ENST00000470828 747 ntBASIC2.93□□□□□ -1.94
UPK1AO00322 AC104689.1-201ENST00000473356 768 ntBASIC2.93□□□□□ -1.94
UPK1AO00322 AC109925.1-201ENST00000478069 331 ntBASIC2.93□□□□□ -1.94
UPK1AO00322 AP004217.1-201ENST00000480579 346 ntBASIC2.93□□□□□ -1.94
UPK1AO00322 AC078817.1-201ENST00000492623 435 ntBASIC2.93□□□□□ -1.94
UPK1AO00322 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC2.93□□□□□ -1.94
UPK1AO00322 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.93□□□□□ -1.94
UPK1AO00322 RNU4-60P-201ENST00000517239 135 ntBASIC2.93□□□□□ -1.94
UPK1AO00322 RPL12P22-201ENST00000519073 490 ntBASIC2.93□□□□□ -1.94
UPK1AO00322 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.93□□□□□ -1.94
UPK1AO00322 OR5AK3P-201ENST00000527486 1297 ntBASIC2.93□□□□□ -1.94
UPK1AO00322 MTND2P26-201ENST00000528255 1029 ntBASIC2.93□□□□□ -1.94
UPK1AO00322 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.93□□□□□ -1.94
UPK1AO00322 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC2.93□□□□□ -1.94
UPK1AO00322 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
UPK1AO00322 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.93□□□□□ -1.94
UPK1AO00322 SERPINE4P-201ENST00000554978 281 ntBASIC2.93□□□□□ -1.94
UPK1AO00322 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.93□□□□□ -1.94
UPK1AO00322 MIR5680-201ENST00000577577 84 ntBASIC2.93□□□□□ -1.94
UPK1AO00322 AC005412.1-201ENST00000580812 1049 ntBASIC2.93□□□□□ -1.94
UPK1AO00322 AC090312.2-201ENST00000582687 378 ntBASIC2.93□□□□□ -1.94
UPK1AO00322 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC2.93□□□□□ -1.94
UPK1AO00322 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC2.93□□□□□ -1.94
UPK1AO00322 AL359535.1-201ENST00000612100 1087 ntBASIC2.93□□□□□ -1.94
UPK1AO00322 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.93□□□□□ -1.94
UPK1AO00322 MIR7112-201ENST00000616126 65 ntBASIC2.93□□□□□ -1.94
UPK1AO00322 AC025016.1-201ENST00000616746 682 ntBASIC2.93□□□□□ -1.94
UPK1AO00322 PLCE1P1-201ENST00000622094 305 ntBASIC2.93□□□□□ -1.94
UPK1AO00322 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.93□□□□□ -1.94
UPK1AO00322 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
UPK1AO00322 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
UPK1AO00322 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.93□□□□□ -1.94
UPK1AO00322 AC024341.1-201ENST00000526444 1552 ntBASIC2.92□□□□□ -1.94
UPK1AO00322 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
UPK1AO00322 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
UPK1AO00322 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
UPK1AO00322 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.92□□□□□ -1.94
UPK1AO00322 DYNLT3P1-201ENST00000378574 347 ntBASIC2.92□□□□□ -1.94
UPK1AO00322 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
UPK1AO00322 RNU2-21P-201ENST00000410368 188 ntBASIC2.92□□□□□ -1.94
UPK1AO00322 AL389915.1-201ENST00000422463 466 ntBASIC2.92□□□□□ -1.94
UPK1AO00322 AC241520.1-201ENST00000422654 1099 ntBASIC2.92□□□□□ -1.94
UPK1AO00322 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.92□□□□□ -1.94
UPK1AO00322 TRIM60P13-201ENST00000432350 1283 ntBASIC2.92□□□□□ -1.94
UPK1AO00322 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.92□□□□□ -1.94
UPK1AO00322 AL591503.2-201ENST00000442314 1005 ntBASIC2.92□□□□□ -1.94
UPK1AO00322 AL358232.1-201ENST00000448030 501 ntBASIC2.92□□□□□ -1.94
UPK1AO00322 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC2.92□□□□□ -1.94
UPK1AO00322 RN7SL863P-201ENST00000462370 296 ntBASIC2.92□□□□□ -1.94
UPK1AO00322 RN7SL601P-201ENST00000471221 293 ntBASIC2.92□□□□□ -1.94
UPK1AO00322 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC2.92□□□□□ -1.94
UPK1AO00322 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
UPK1AO00322 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.92□□□□□ -1.94
UPK1AO00322 AC023141.12-201ENST00000512399 199 ntBASIC2.92□□□□□ -1.94
UPK1AO00322 RNA5SP76-201ENST00000516277 87 ntBASIC2.92□□□□□ -1.94
UPK1AO00322 LY96-202ENST00000518893 430 ntTSL 3 BASIC2.92□□□□□ -1.94
UPK1AO00322 C1DP5-201ENST00000525775 383 ntBASIC2.92□□□□□ -1.94
UPK1AO00322 AC139103.1-201ENST00000534696 1030 ntBASIC2.92□□□□□ -1.94
UPK1AO00322 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.92□□□□□ -1.94
UPK1AO00322 AP003717.3-201ENST00000544832 1180 ntBASIC2.92□□□□□ -1.94
UPK1AO00322 AL442163.2-201ENST00000553912 710 ntBASIC2.92□□□□□ -1.94
UPK1AO00322 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.92□□□□□ -1.94
UPK1AO00322 MIR4506-201ENST00000584693 77 ntBASIC2.92□□□□□ -1.94
UPK1AO00322 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.92□□□□□ -1.94
UPK1AO00322 AC012119.1-201ENST00000603184 222 ntBASIC2.92□□□□□ -1.94
UPK1AO00322 AC011468.4-201ENST00000603942 409 ntBASIC2.92□□□□□ -1.94
UPK1AO00322 PRELID3BP8-201ENST00000604148 295 ntBASIC2.92□□□□□ -1.94
UPK1AO00322 AC018754.1-201ENST00000607486 925 ntBASIC2.92□□□□□ -1.94
UPK1AO00322 AL355802.4-201ENST00000607635 548 ntBASIC2.92□□□□□ -1.94
UPK1AO00322 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms